Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0118g00080.t01
CDS Infomation

cds chromosome:12X:11:5614379:5618643:-1 gene:VIT_11s0118g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTGGTATTCCACCGATTATTGGCACTTTGGGCTATCTTAAAGCCTTATCTCTTGGC
TACAATAATTTAAATGATTCTTTTTCCATGGAAGGCTTGTGCAAACTCAACCTTGAAGAG
CTGGATCTTAGTAATAATGGATTTGAGGGTAGTCTTCCTGCGTGCCTCAACAATTTGACA
TCCCTACGTTTGCTTGACCTATCCAGAAATGATTTTCGTGGAACTATTCCTCCATCTCTC
TTCTCCAATCTGAAGTCACTCGAGTACATTTCTCTTTCTTACAATCATTTCGAGGGCTCA
ATCTATTTTGGTTCACTTTTCAACCACTCCAGACTCGAGGTCTTCGAACTTTCTAGCAAT
AACAAGTATTTGAAGGTTGAGACTGAAAATCCAACATGGTCATTTCCTCTATTTCAATTG
AAAATCCTCCGGTTATCCAATTGCACCCTCAATTGGCCAAGCCAGGTTGTACCAAGCTTT
CTTTTGAGTCAATATGATTTGAGAGTGGTCGACTTTGGCTACAACAATATGACAGGAAAA
GTCCCAACCTGGTTATTAGCCAATAATACTAAACTAGAATACCTAAGCTTTGAAAGTAAC
AGCTTGACAGGTGTTCTTGATTTGGGCTCAAATTCAATACATTACTACATGTGTGTGCTT
GATTTCTCCTTGAATTGCATTCATGGAGAGCTTCCACCTTTCATCGGCTCTATTTTTCCA
AGGTTGGAGGTCTTAAACTTGTCTGGAAATGCATTACAAGGTAATATTCCTTCCTCAATG
GGTGACATGGAACAGTTGGGATCTTTAGATTTGTCAAACAATAATCTCTCGGGACAACTA
CCTGAGCACATGATGATGGGTTGCATCTCATTGGAGGTTTTAAAGCTATCCAACAATAGT
TTACATGACACTCTTCCCATAAAATCGAACTTGACACTGTTATCCTCTTTGTCTTTGGAT
AACAATGACTTCTGGGGAGAGATTTCTCGTGGATTTTTGAATAGCTCTTCCCTACTATTG
TTGGATGTCAGCTCCAACTCGTTGATGGGTCAAATTCCAGATTCGATTGGAGACTTCTCA
GCCTTGAGGACACTTATCTTGTCTAGAAATTATTTGGATGGTGTTGTGCCAACAGGCTTT
TGCAAACTCAATGAACTACGCTTTTTAGACCTTTCTCACAACAAAATTGGCCCAACCCTT
CCTCTTTGTGCCAATCTAACAAACATGAAGTTTTTACATTTGGAAAGCAATGAACTAATA
GGACCTATACCCCATGTTCTGGCTGAAGCTACCTCTCTTGTGACATTGAATTTGAGGGAT
AACAAACTATCAAGCCCAATTCCCCCTTGGATTAGTTTACTTTCAAAATTGAGGGTTCTT
CTCTTGAAAGGAAATCAACTTGAAGACTCAATTCCTCTTCATTTGTGTCAGCTCAAATCA
ATCAGCATACTGGATCTTTCTCATAATCATCTTTCCGGATCCATACCTCCTTGCCTAGAT
AATATAACTTTTGGAAGAGAAGTTGCATTAATGGATGACACATTTTTTATAGAAGGCTTT
GAGTCGTGGTGGGGTGCTTCCCCAGAAACATATTCATATGAAAATCAACTTTCTGTGTAC
GTGGATATGGATTTCAGTTTTGAGACATCCGCTGAAAGTGAAGAAATAGAGTTCATAACA
AAGAGTAGGTCCGAATCTTATATGGGAAACATCTTGTACTTCATGTCTGGATTGGATCTT
TCAGGGAACAAATTGGCAGGTCCAATTCCTCCAGAAATTGGAAATCTAAGTGGGATTCAT
ACTCTAAACTTATCGTACAACCAGTTGACAGGATCTATTCCACATACATTTTCCAACCTA
AAGGAAATAGAAAGCTTGGACCTATCCCACAATAGATTGACAGGTCAAATTCCACCACAG
ATGGTAATAGAGTTAAACTTCTTGACGATTTTCACTGTCGCTCACAACAATTTATCAGGT
AAGACTCCAGAGAGGAAGTTTCAGTTTGCAACATTTGAACAAAGCAGTTACGAGGGCAAC
CCTCTTCTATGTGGGCTGCCATTAGATCAAAGTTGCACTCCCACTAGTGCCCCACCTGCA
GTCAAACCACCAGTTTCAGACAACAGAGAAAATAGCTCTTGGGAAGCCATATTCTTATGG
AGTTTTGGAGGATCATACGGAGTGGCATTCTTATGCATCGTTGCTTTTCTCTACTTGAAC
TCCTATTACCGAGAACTGCTCTTTTATTTCATTGGAGAGCATGTCCCTTTTCTTCGGTTA
AGGGGTTGA

Peptide Sequence

PEP ID

VIT_11s0118g00080.t01
PEP Infomation

pep chromosome:12X:11:5614379:5618643:-1 gene:VIT_11s0118g00080 transcript:VIT_11s0118g00080.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGGIPPIIGTLGYLKALSLGYNNLNDSFSMEGLCKLNLEELDLSNNGFEGSLPACLNNLT
SLRLLDLSRNDFRGTIPPSLFSNLKSLEYISLSYNHFEGSIYFGSLFNHSRLEVFELSSN
NKYLKVETENPTWSFPLFQLKILRLSNCTLNWPSQVVPSFLLSQYDLRVVDFGYNNMTGK
VPTWLLANNTKLEYLSFESNSLTGVLDLGSNSIHYYMCVLDFSLNCIHGELPPFIGSIFP
RLEVLNLSGNALQGNIPSSMGDMEQLGSLDLSNNNLSGQLPEHMMMGCISLEVLKLSNNS
LHDTLPIKSNLTLLSSLSLDNNDFWGEISRGFLNSSSLLLLDVSSNSLMGQIPDSIGDFS
ALRTLILSRNYLDGVVPTGFCKLNELRFLDLSHNKIGPTLPLCANLTNMKFLHLESNELI
GPIPHVLAEATSLVTLNLRDNKLSSPIPPWISLLSKLRVLLLKGNQLEDSIPLHLCQLKS
ISILDLSHNHLSGSIPPCLDNITFGREVALMDDTFFIEGFESWWGASPETYSYENQLSVY
VDMDFSFETSAESEEIEFITKSRSESYMGNILYFMSGLDLSGNKLAGPIPPEIGNLSGIH
TLNLSYNQLTGSIPHTFSNLKEIESLDLSHNRLTGQIPPQMVIELNFLTIFTVAHNNLSG
KTPERKFQFATFEQSSYEGNPLLCGLPLDQSCTPTSAPPAVKPPVSDNRENSSWEAIFLW
SFGGSYGVAFLCIVAFLYLNSYYRELLFYFIGEHVPFLRLRG

Transcript Sequence

Transcript ID

VIT_11s0118g00080.t01
Transcript Infomation

cdna chromosome:12X:11:5614379:5618643:-1 gene:VIT_11s0118g00080 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGACATAAATATTTGAGCAGACTGGAGGTGTTGAAGCTATATGGGAATGGTTTAATGGG
TGGTATTCCACCGATTATTGGCACTTTGGGCTATCTTAAAGCCTTATCTCTTGGCTACAA
TAATTTAAATGATTCTTTTTCCATGGAAGGCTTGTGCAAACTCAACCTTGAAGAGCTGGA
TCTTAGTAATAATGGATTTGAGGGTAGTCTTCCTGCGTGCCTCAACAATTTGACATCCCT
ACGTTTGCTTGACCTATCCAGAAATGATTTTCGTGGAACTATTCCTCCATCTCTCTTCTC
CAATCTGAAGTCACTCGAGTACATTTCTCTTTCTTACAATCATTTCGAGGGCTCAATCTA
TTTTGGTTCACTTTTCAACCACTCCAGACTCGAGGTCTTCGAACTTTCTAGCAATAACAA
GTATTTGAAGGTTGAGACTGAAAATCCAACATGGTCATTTCCTCTATTTCAATTGAAAAT
CCTCCGGTTATCCAATTGCACCCTCAATTGGCCAAGCCAGGTTGTACCAAGCTTTCTTTT
GAGTCAATATGATTTGAGAGTGGTCGACTTTGGCTACAACAATATGACAGGAAAAGTCCC
AACCTGGTTATTAGCCAATAATACTAAACTAGAATACCTAAGCTTTGAAAGTAACAGCTT
GACAGGTGTTCTTGATTTGGGCTCAAATTCAATACATTACTACATGTGTGTGCTTGATTT
CTCCTTGAATTGCATTCATGGAGAGCTTCCACCTTTCATCGGCTCTATTTTTCCAAGGTT
GGAGGTCTTAAACTTGTCTGGAAATGCATTACAAGGTAATATTCCTTCCTCAATGGGTGA
CATGGAACAGTTGGGATCTTTAGATTTGTCAAACAATAATCTCTCGGGACAACTACCTGA
GCACATGATGATGGGTTGCATCTCATTGGAGGTTTTAAAGCTATCCAACAATAGTTTACA
TGACACTCTTCCCATAAAATCGAACTTGACACTGTTATCCTCTTTGTCTTTGGATAACAA
TGACTTCTGGGGAGAGATTTCTCGTGGATTTTTGAATAGCTCTTCCCTACTATTGTTGGA
TGTCAGCTCCAACTCGTTGATGGGTCAAATTCCAGATTCGATTGGAGACTTCTCAGCCTT
GAGGACACTTATCTTGTCTAGAAATTATTTGGATGGTGTTGTGCCAACAGGCTTTTGCAA
ACTCAATGAACTACGCTTTTTAGACCTTTCTCACAACAAAATTGGCCCAACCCTTCCTCT
TTGTGCCAATCTAACAAACATGAAGTTTTTACATTTGGAAAGCAATGAACTAATAGGACC
TATACCCCATGTTCTGGCTGAAGCTACCTCTCTTGTGACATTGAATTTGAGGGATAACAA
ACTATCAAGCCCAATTCCCCCTTGGATTAGTTTACTTTCAAAATTGAGGGTTCTTCTCTT
GAAAGGAAATCAACTTGAAGACTCAATTCCTCTTCATTTGTGTCAGCTCAAATCAATCAG
CATACTGGATCTTTCTCATAATCATCTTTCCGGATCCATACCTCCTTGCCTAGATAATAT
AACTTTTGGAAGAGAAGTTGCATTAATGGATGACACATTTTTTATAGAAGGCTTTGAGTC
GTGGTGGGGTGCTTCCCCAGAAACATATTCATATGAAAATCAACTTTCTGTGTACGTGGA
TATGGATTTCAGTTTTGAGACATCCGCTGAAAGTGAAGAAATAGAGTTCATAACAAAGAG
TAGGTCCGAATCTTATATGGGAAACATCTTGTACTTCATGTCTGGATTGGATCTTTCAGG
GAACAAATTGGCAGGTCCAATTCCTCCAGAAATTGGAAATCTAAGTGGGATTCATACTCT
AAACTTATCGTACAACCAGTTGACAGGATCTATTCCACATACATTTTCCAACCTAAAGGA
AATAGAAAGCTTGGACCTATCCCACAATAGATTGACAGGTCAAATTCCACCACAGATGGT
AATAGAGTTAAACTTCTTGACGATTTTCACTGTCGCTCACAACAATTTATCAGGTAAGAC
TCCAGAGAGGAAGTTTCAGTTTGCAACATTTGAACAAAGCAGTTACGAGGGCAACCCTCT
TCTATGTGGGCTGCCATTAGATCAAAGTTGCACTCCCACTAGTGCCCCACCTGCAGTCAA
ACCACCAGTTTCAGACAACAGAGAAAATAGCTCTTGGGAAGCCATATTCTTATGGAGTTT
TGGAGGATCATACGGAGTGGCATTCTTATGCATCGTTGCTTTTCTCTACTTGAACTCCTA
TTACCGAGAACTGCTCTTTTATTTCATTGGAGAGCATGTCCCTTTTCTTCGGTTAAGGGG
TTGA