Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0103g00620.t01
CDS Infomation

cds chromosome:12X:11:16736925:16744163:-1 gene:VIT_11s0103g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGGTACCTTTGAAAGTTTCAGAAAAGCCTATGGTGCACTCAAGGACTCAACCATGGTT
GGCCTTGCCAAGGTCAACAGTGAATTCAAGGATTTGGATATTGCTATTGTGAAGGCCACC
AACCATGTTGAATGCCCTCCCAAGGAACGCCATGTTCGAAAAATATTTTCTGCGACATCA
GTAGTGCGGCCACGTTCGGATGTGGCCTATTGCATTCATGCACTGGCAAGGAGATTGGCA
AAAACCAAAAACTGGATTGTGGCCTTAAAGACATTGATAGTTATTCATAGAACTTTAAGG
GAGGGTGATCCTACCTTCCGAGAAGAGCTTTTAAACTATTCAAATAGAGGACATGTTCTC
CAGATATCCAATTTCAAGGATGATTCAAGCCCTCTGGCTTGGGATTGCTCAGCATGGGTT
AGAACATATGCCCTATTTTTAGAGGAACGACTTGAGTGCTTTAGGGTCTTGAAATATGAT
ATTGAATCAGAGCGCCTGACTAAATCTTCACAGGGGGCAACTAAGACACATAGTCGAACA
CGGCATTTGGCTAGTGAAGATCTGTTGGATCAGCTACCTGCATTGCAGCAGCTTCTTTAC
AGACTTATTTGTTGTCTGCCTGAAGGAGCAGCTTTTGGCAACTATCTCATACAGTACGCC
CTGGCTCTGGTTTTGAAAGAGAGCTTTAAAATTTATTGTGCCATCAATGATGGGATTATC
AATCTTGTAGACATGTTCTTTGACATGCCAAGACATGATGCAGTTAAAGCTCTCAACATC
TATAAAAGAGCTGGCAAACAGGCTGAAAATCTTGCAGATTTTTATGAATTCTGCAAAGGC
TTGGACCTTGCAAGGCACTTCCAATTTCCAACATTGAGACAGCCACCACCTTCATTTCTT
GCAACAATGGAAGAATATATAAAAGAAGCACCTCAGACAGGCTCTCATTCAAAAAACTAT
CAGGATCATCAGGAACCAGAGCCTCAGAAACCTGATGAGCCTCCGCCTCCAGAAACTGAG
AAGCAAGTAGAAGTTGATGAAAAACCGGTGGTAGAGACACAAGAAGAACCTGAGACCAAA
AATGAGGTCGAAGCTCCCCCACTGATTGCAACTGACACTACAGCAGATCTTTTGGGATTG
AATGAGATCAATCCAAAAGCTGCAGAACTAGAGGAAAGCAATGCATTGGCTCTTGCAATA
ATTCCACCTGGCAATGATCCAGCTTCTGCAGTGAATAGTGGATTGGGTGACTTTGGTGGG
TTGAATGCTTCAGGGTGGGAGCTAGCACTGGTTACCACACCAAGTCCCAATATCAGCCAA
GCGACAGACAACAAATTGGCTGGCGGGTTCAACAAGCTATTACTTGATAGCTTGTATGAA
GATGAAGCTGCAAGGATGAGACTACAGCAACAGAATGCAGGGTATGGATTTGGAATGACA
ACGCAAAATGCTCCAAATCCATTTGAAGCAAATGATCCGTTTTCAATGTCAAACAGCATA
GCACCATCCACCAACGTGCAGATGGCCTTGATGACTCAGCAGCAGCACCAAATGATGCTG
CAACAACAACAGCAGCAGCAGCAACTACAATACCAGCAACAACAGTACAAACAGCAGCAA
GGCATGATGTCCATGTTGCCTCACCAGTATCTGCCTCAGTACCCTCAACAACCGATGCAG
ATGCAGAATATGACCTCTTCTAATCCATTTGGAGATCCAGTTTTTGCACAACCTCAAAGT
GCAATGCCACAACAAGGAAACTATGGTCTACTCTAG

Peptide Sequence

PEP ID

VIT_11s0103g00620.t01
PEP Infomation

pep chromosome:12X:11:16736925:16744163:-1 gene:VIT_11s0103g00620 transcript:VIT_11s0103g00620.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MGTFESFRKAYGALKDSTMVGLAKVNSEFKDLDIAIVKATNHVECPPKERHVRKIFSATS
VVRPRSDVAYCIHALARRLAKTKNWIVALKTLIVIHRTLREGDPTFREELLNYSNRGHVL
QISNFKDDSSPLAWDCSAWVRTYALFLEERLECFRVLKYDIESERLTKSSQGATKTHSRT
RHLASEDLLDQLPALQQLLYRLICCLPEGAAFGNYLIQYALALVLKESFKIYCAINDGII
NLVDMFFDMPRHDAVKALNIYKRAGKQAENLADFYEFCKGLDLARHFQFPTLRQPPPSFL
ATMEEYIKEAPQTGSHSKNYQDHQEPEPQKPDEPPPPETEKQVEVDEKPVVETQEEPETK
NEVEAPPLIATDTTADLLGLNEINPKAAELEESNALALAIIPPGNDPASAVNSGLGDFGG
LNASGWELALVTTPSPNISQATDNKLAGGFNKLLLDSLYEDEAARMRLQQQNAGYGFGMT
TQNAPNPFEANDPFSMSNSIAPSTNVQMALMTQQQHQMMLQQQQQQQQLQYQQQQYKQQQ
GMMSMLPHQYLPQYPQQPMQMQNMTSSNPFGDPVFAQPQSAMPQQGNYGLL

Transcript Sequence

Transcript ID

VIT_11s0103g00620.t01
Transcript Infomation

cdna chromosome:12X:11:16736925:16744163:-1 gene:VIT_11s0103g00620 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAATGGGTACCTTTGAAAGTTTCAGAAAAGCCTATGGTGCACTCAAGGACTCAACCATGG
TTGGCCTTGCCAAGGTCAACAGTGAATTCAAGGATTTGGATATTGCTATTGTGAAGGCCA
CCAACCATGTTGAATGCCCTCCCAAGGAACGCCATGTTCGAAAAATATTTTCTGCGACAT
CAGTAGTGCGGCCACGTTCGGATGTGGCCTATTGCATTCATGCACTGGCAAGGAGATTGG
CAAAAACCAAAAACTGGATTGTGGCCTTAAAGACATTGATAGTTATTCATAGAACTTTAA
GGGAGGGTGATCCTACCTTCCGAGAAGAGCTTTTAAACTATTCAAATAGAGGACATGTTC
TCCAGATATCCAATTTCAAGGATGATTCAAGCCCTCTGGCTTGGGATTGCTCAGCATGGG
TTAGAACATATGCCCTATTTTTAGAGGAACGACTTGAGTGCTTTAGGGTCTTGAAATATG
ATATTGAATCAGAGCGCCTGACTAAATCTTCACAGGGGGCAACTAAGACACATAGTCGAA
CACGGCATTTGGCTAGTGAAGATCTGTTGGATCAGCTACCTGCATTGCAGCAGCTTCTTT
ACAGACTTATTTGTTGTCTGCCTGAAGGAGCAGCTTTTGGCAACTATCTCATACAGTACG
CCCTGGCTCTGGTTTTGAAAGAGAGCTTTAAAATTTATTGTGCCATCAATGATGGGATTA
TCAATCTTGTAGACATGTTCTTTGACATGCCAAGACATGATGCAGTTAAAGCTCTCAACA
TCTATAAAAGAGCTGGCAAACAGGCTGAAAATCTTGCAGATTTTTATGAATTCTGCAAAG
GCTTGGACCTTGCAAGGCACTTCCAATTTCCAACATTGAGACAGCCACCACCTTCATTTC
TTGCAACAATGGAAGAATATATAAAAGAAGCACCTCAGACAGGCTCTCATTCAAAAAACT
ATCAGGATCATCAGGAACCAGAGCCTCAGAAACCTGATGAGCCTCCGCCTCCAGAAACTG
AGAAGCAAGTAGAAGTTGATGAAAAACCGGTGGTAGAGACACAAGAAGAACCTGAGACCA
AAAATGAGGTCGAAGCTCCCCCACTGATTGCAACTGACACTACAGCAGATCTTTTGGGAT
TGAATGAGATCAATCCAAAAGCTGCAGAACTAGAGGAAAGCAATGCATTGGCTCTTGCAA
TAATTCCACCTGGCAATGATCCAGCTTCTGCAGTGAATAGTGGATTGGGTGACTTTGGTG
GGTTGAATGCTTCAGGGTGGGAGCTAGCACTGGTTACCACACCAAGTCCCAATATCAGCC
AAGCGACAGACAACAAATTGGCTGGCGGGTTCAACAAGCTATTACTTGATAGCTTGTATG
AAGATGAAGCTGCAAGGATGAGACTACAGCAACAGAATGCAGGGTATGGATTTGGAATGA
CAACGCAAAATGCTCCAAATCCATTTGAAGCAAATGATCCGTTTTCAATGTCAAACAGCA
TAGCACCATCCACCAACGTGCAGATGGCCTTGATGACTCAGCAGCAGCACCAAATGATGC
TGCAACAACAACAGCAGCAGCAGCAACTACAATACCAGCAACAACAGTACAAACAGCAGC
AAGGCATGATGTCCATGTTGCCTCACCAGTATCTGCCTCAGTACCCTCAACAACCGATGC
AGATGCAGAATATGACCTCTTCTAATCCATTTGGAGATCCAGTTTTTGCACAACCTCAAA
GTGCAATGCCACAACAAGGAAACTATGGTCTACTCTAG