Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0103g00550.t01
CDS Infomation

cds chromosome:12X:11:16593915:16604330:-1 gene:VIT_11s0103g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAACAGATCTTGTGGGATACTCGTAGAACACTGGGCACTAGATCAGTGAACATGAGG
GCCATGGAGCTTGGGTGTGCAGTTGTAGTTTTATTTAGCCTTTTGATTGCTGGAAATGCA
GAGATTTACATCGTGACAGTTATAGGAGAGCCAGTTATAAGTTACAAGGGTGGTGTACCT
GGTTTTGAAGCCACTGCTGTGGAATCTGATGAGACAATTGATGTTACTAGTGAATTGGTT
ACATCTTACTCTCGTCACCTTGAAATGAAGCACGACATGCTCCTATCGTTGCTGTTTGAG
CATGGGACTTACAAGAAGCTCTACAGCTATCGGCATCTTATTAATGGCTTTGCAGTTCAT
ATATCCCCAGAACAGGCAGAAGTCCTTAGACAGGCCCCAGGTGTGAAATCTGTGGAGAGA
GATTGGAAGGTGAGAAGACTTACAACACATACTCCACAGTTTCTGGGGCTTCCAACTGGT
GTATGGCCGACAGGAGGTGGCTTTGACAGGGCTGGAGAGGACATTGTGATAGGATTTGTG
GACTCAGGTATTTTTCCTCACCATCCGAGCTTTGCCACCCACAACGTTGAACCATACGGG
CCCATCCCTAAGTACAGAGGAAAATGTGAAGTTGATCCTGACACTAAAAGGAACTTCTGT
AATGGGAAGATTGTTGGAGCCCAACATTTTGCAGAAGCTGCAATAGCAGCTGGTTCATTT
AATCCTTCAGTTGATTTTGCTTCTCCTTTGGATGGTGATGGGCATGGAAGTCACACAGCA
GCTATTGCAGCTGGAAATAATGGAATTCCAGTGAGAATGCATGGGTATGAATTTGGGAAA
GCAAGTGGGATGGCTCCCCGTGCCAGGGTTGCTGTATACAAGGCACTCTACCGGCTTTTT
GGAGGTTTTGTTGCAGATGTGGTAGCTGCAATTGATCAGGCTGTTCATGATGGTGTGGAC
ATTCTCAATCTCTCTGTGGGGCCAAATAGTCCTCCAGCAACCACCAAGACCACGTTTTTA
AACCCTTTTGATGCTGCACTTCTTTCAGCTGTGAAAGCAGGTGTATTTGTTGCACAGGCG
GCTGGAAATGGGGGTCCTTTTCCCAAGTCCTTGTTGTCTTATAGTCCGTGGATTGCATCT
GTAGCTGCAGCAATCGATGATCGTAGATACAAAAACCATCTTACTTTGGGAAATGGGAAA
ATCTTACCTGGAATTGGTTTGTCACCTTCTACACATTTCAATCGAACATTCACCCTGGTT
GCTGCAAATGATGTGCTGCTGGATTCTTCGGTTGTGAAGTACAGTCCTTCAGACTGCCAA
AGACCAGAAGTTCTAAACAAAAACTTGGTTGAAGGGAACATTCTTCTTTGTGGCTATTCC
TTCAATTTTGTTGTTGGTACAGCATCAATCAAGAAGGTGTCAGAAACGGCCAAGAGTCTT
GGTGCAATTGGGTTTGTTCTTGCTGTGGAAAATGTTTCTCCAGGAACAAAGTTTGATCCT
GTTCCTGTCAGTATTCCTGGGATTCTCATCACAGAAGTCAGCAAATCAATGGATCTTATA
GAGTACTATAATACATCCACTTCAAGAGATTGGACTGGACGAGTGAAGAGCTTTAAAGCT
ACAGGTAGCATTGGGGATGGATTGATGCCTATACTCCACAAATCAGCACCTCAGGTGGCA
TTATTTTCTGCTCGGGGACCCAATATAAGAGATTTCAACTTCCAAGATGCGGATCTTCTC
AAACCAGATATTCTAGCTCCAGGTTCTCTCATTTGGGCTGCCTGGTCTCCAAATGGAACA
GATGAGGCCAATTATGTTGGAGAAGGGTTTGCAATGATCTCTGGAACTAGCATGGCTGCA
CCACATATAGCTGGAATAGCTGCCCTTGTAAAGCAGAAACACCCTCATTGGAGCCCTGCT
GCCATCAAATCAGCTTTAATGACGACATCAACAACGCTCGACAGAGCTGAAAACCCTCTT
CGAGCACAGCAGTATTCTGGATCAGAAACTGTCACACTTGTCACTGCTACACCTTTTGAT
TATGGGAGTGGCCATGTTACTCCTAGAGCGGCTCTGGATCCTGGACTTATCTTTGATGCA
GCTTATGAGGACTACATAGGGTTCTTGTGCACAACACCAGGAATTGATGCTCATGAGATA
AAGAACTACACAAGCTTACCATGCAATTACACCATGGGCCGCCCATCAAATCTCAACACC
CCATCAATCACAATCTCCCACCTTGTGGGAACTCAAACTGTCACTCGCACAGTCACAAAT
GTTGCTGGTCTAGAAACCTATGTGATCTCAACCAGAATGGCACCTGCAATTGCCGTTGAA
GCCAACCCCCCAGCAATGACTCTGAAACCCGGTGCATCAAGGAAGTTCTCAGTGACACTG
ACCGCTCGATCAGTGACTGGAACCTACAGTTTTGGAGAAGTTTTGTTGAAAGGAAGCAGA
GGACACAAGGTACGAATCCCTGTGGTAGCTATGGCTTATGATCGATAG

Peptide Sequence

PEP ID

VIT_11s0103g00550.t01
PEP Infomation

pep chromosome:12X:11:16593915:16604330:-1 gene:VIT_11s0103g00550 transcript:VIT_11s0103g00550.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEQILWDTRRTLGTRSVNMRAMELGCAVVVLFSLLIAGNAEIYIVTVIGEPVISYKGGVP
GFEATAVESDETIDVTSELVTSYSRHLEMKHDMLLSLLFEHGTYKKLYSYRHLINGFAVH
ISPEQAEVLRQAPGVKSVERDWKVRRLTTHTPQFLGLPTGVWPTGGGFDRAGEDIVIGFV
DSGIFPHHPSFATHNVEPYGPIPKYRGKCEVDPDTKRNFCNGKIVGAQHFAEAAIAAGSF
NPSVDFASPLDGDGHGSHTAAIAAGNNGIPVRMHGYEFGKASGMAPRARVAVYKALYRLF
GGFVADVVAAIDQAVHDGVDILNLSVGPNSPPATTKTTFLNPFDAALLSAVKAGVFVAQA
AGNGGPFPKSLLSYSPWIASVAAAIDDRRYKNHLTLGNGKILPGIGLSPSTHFNRTFTLV
AANDVLLDSSVVKYSPSDCQRPEVLNKNLVEGNILLCGYSFNFVVGTASIKKVSETAKSL
GAIGFVLAVENVSPGTKFDPVPVSIPGILITEVSKSMDLIEYYNTSTSRDWTGRVKSFKA
TGSIGDGLMPILHKSAPQVALFSARGPNIRDFNFQDADLLKPDILAPGSLIWAAWSPNGT
DEANYVGEGFAMISGTSMAAPHIAGIAALVKQKHPHWSPAAIKSALMTTSTTLDRAENPL
RAQQYSGSETVTLVTATPFDYGSGHVTPRAALDPGLIFDAAYEDYIGFLCTTPGIDAHEI
KNYTSLPCNYTMGRPSNLNTPSITISHLVGTQTVTRTVTNVAGLETYVISTRMAPAIAVE
ANPPAMTLKPGASRKFSVTLTARSVTGTYSFGEVLLKGSRGHKVRIPVVAMAYDR

Transcript Sequence

Transcript ID

VIT_11s0103g00550.t01
Transcript Infomation

cdna chromosome:12X:11:16593915:16604330:-1 gene:VIT_11s0103g00550 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGGTGAGTGAGAGTGGTGCTCCTCTGTTTGGTTGGTGAGAAAATGTGAGAAAGTGAAAG
AAAGCCTTTTTGTTGGTTGTTGATCTTGTGTAACTGAAAAGTGCAAAATACCCATTCAGC
TGAGCCCAGCAAGAAACCCACTTGAGCGAATGGAACAGATCTTGTGGGATACTCGTAGAA
CACTGGGCACTAGATCAGTGAACATGAGGGCCATGGAGCTTGGGTGTGCAGTTGTAGTTT
TATTTAGCCTTTTGATTGCTGGAAATGCAGAGATTTACATCGTGACAGTTATAGGAGAGC
CAGTTATAAGTTACAAGGGTGGTGTACCTGGTTTTGAAGCCACTGCTGTGGAATCTGATG
AGACAATTGATGTTACTAGTGAATTGGTTACATCTTACTCTCGTCACCTTGAAATGAAGC
ACGACATGCTCCTATCGTTGCTGTTTGAGCATGGGACTTACAAGAAGCTCTACAGCTATC
GGCATCTTATTAATGGCTTTGCAGTTCATATATCCCCAGAACAGGCAGAAGTCCTTAGAC
AGGCCCCAGGTGTGAAATCTGTGGAGAGAGATTGGAAGGTGAGAAGACTTACAACACATA
CTCCACAGTTTCTGGGGCTTCCAACTGGTGTATGGCCGACAGGAGGTGGCTTTGACAGGG
CTGGAGAGGACATTGTGATAGGATTTGTGGACTCAGGTATTTTTCCTCACCATCCGAGCT
TTGCCACCCACAACGTTGAACCATACGGGCCCATCCCTAAGTACAGAGGAAAATGTGAAG
TTGATCCTGACACTAAAAGGAACTTCTGTAATGGGAAGATTGTTGGAGCCCAACATTTTG
CAGAAGCTGCAATAGCAGCTGGTTCATTTAATCCTTCAGTTGATTTTGCTTCTCCTTTGG
ATGGTGATGGGCATGGAAGTCACACAGCAGCTATTGCAGCTGGAAATAATGGAATTCCAG
TGAGAATGCATGGGTATGAATTTGGGAAAGCAAGTGGGATGGCTCCCCGTGCCAGGGTTG
CTGTATACAAGGCACTCTACCGGCTTTTTGGAGGTTTTGTTGCAGATGTGGTAGCTGCAA
TTGATCAGGCTGTTCATGATGGTGTGGACATTCTCAATCTCTCTGTGGGGCCAAATAGTC
CTCCAGCAACCACCAAGACCACGTTTTTAAACCCTTTTGATGCTGCACTTCTTTCAGCTG
TGAAAGCAGGTGTATTTGTTGCACAGGCGGCTGGAAATGGGGGTCCTTTTCCCAAGTCCT
TGTTGTCTTATAGTCCGTGGATTGCATCTGTAGCTGCAGCAATCGATGATCGTAGATACA
AAAACCATCTTACTTTGGGAAATGGGAAAATCTTACCTGGAATTGGTTTGTCACCTTCTA
CACATTTCAATCGAACATTCACCCTGGTTGCTGCAAATGATGTGCTGCTGGATTCTTCGG
TTGTGAAGTACAGTCCTTCAGACTGCCAAAGACCAGAAGTTCTAAACAAAAACTTGGTTG
AAGGGAACATTCTTCTTTGTGGCTATTCCTTCAATTTTGTTGTTGGTACAGCATCAATCA
AGAAGGTGTCAGAAACGGCCAAGAGTCTTGGTGCAATTGGGTTTGTTCTTGCTGTGGAAA
ATGTTTCTCCAGGAACAAAGTTTGATCCTGTTCCTGTCAGTATTCCTGGGATTCTCATCA
CAGAAGTCAGCAAATCAATGGATCTTATAGAGTACTATAATACATCCACTTCAAGAGATT
GGACTGGACGAGTGAAGAGCTTTAAAGCTACAGGTAGCATTGGGGATGGATTGATGCCTA
TACTCCACAAATCAGCACCTCAGGTGGCATTATTTTCTGCTCGGGGACCCAATATAAGAG
ATTTCAACTTCCAAGATGCGGATCTTCTCAAACCAGATATTCTAGCTCCAGGTTCTCTCA
TTTGGGCTGCCTGGTCTCCAAATGGAACAGATGAGGCCAATTATGTTGGAGAAGGGTTTG
CAATGATCTCTGGAACTAGCATGGCTGCACCACATATAGCTGGAATAGCTGCCCTTGTAA
AGCAGAAACACCCTCATTGGAGCCCTGCTGCCATCAAATCAGCTTTAATGACGACATCAA
CAACGCTCGACAGAGCTGAAAACCCTCTTCGAGCACAGCAGTATTCTGGATCAGAAACTG
TCACACTTGTCACTGCTACACCTTTTGATTATGGGAGTGGCCATGTTACTCCTAGAGCGG
CTCTGGATCCTGGACTTATCTTTGATGCAGCTTATGAGGACTACATAGGGTTCTTGTGCA
CAACACCAGGAATTGATGCTCATGAGATAAAGAACTACACAAGCTTACCATGCAATTACA
CCATGGGCCGCCCATCAAATCTCAACACCCCATCAATCACAATCTCCCACCTTGTGGGAA
CTCAAACTGTCACTCGCACAGTCACAAATGTTGCTGGTCTAGAAACCTATGTGATCTCAA
CCAGAATGGCACCTGCAATTGCCGTTGAAGCCAACCCCCCAGCAATGACTCTGAAACCCG
GTGCATCAAGGAAGTTCTCAGTGACACTGACCGCTCGATCAGTGACTGGAACCTACAGTT
TTGGAGAAGTTTTGTTGAAAGGAAGCAGAGGACACAAGGTACGAATCCCTGTGGTAGCTA
TGGCTTATGATCGATAGTTTGGTTTGGTCTAGCCCCTAAAATTAAATGTTATGGTTTTCA
TATTCTTTGTAATACGTGGTAATAAGAGATATGAAGATAGATATATTTGTCTTGAGCTCT
ATATTAAGTATAATTATATATGGAAGAGGTGTAAAGATAAAGAAGTGATATAAGGGAGAA
GTGTTAGTTTCTTCCAGTTGTAAGTTTTCCTAATTTGTTGTATAATTTCAGAGGGAATGC
TTCATATTCCTCTTTATTACATTGTATGAAGTAATCTCTGTTACA