Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0103g00250.t01
CDS Infomation

cds chromosome:12X:11:15909171:15915735:1 gene:VIT_11s0103g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCGTCGAGGCCGGAACTTCAGGCGCCGCCAGAGATATTCTACGATGACACCGAAGCT
CGCAAATACACTTCCTCTTCTCGGATCATCGAAATTCAGGCTAAGCTCTCGGAAAGAGCA
TTGGAGCTGCTTGCTTTGCCCGATGATGGAGTTCCCAGATTACTCCTTGACATTGGTTGT
GGATCTGGACTTAGTGGGGAGACACTGTCTGAGAATGGACACCAATGGATTGGTTTAGAT
ATCTCAGAATCAATGCTTAATATTGCATCAGAGCGCGACGTTGATGGTGATCTATTGCTT
GGAGACATGGGTCAGGGTTTAGGACTTCGACCAGGAGTCATTGATGGTGCTATTAGCATC
TCAGCAGTTCAGTGGTTATGCAATGCTGACAAGTCCTCGCACGAGCCACGGTTAAGATTG
AAGGCTTTCTTTACATCATTATATAGATGCTTAGCAAGGGGAGCAAGAGCAGTGCTCCAA
GTATATCCTGAAAATGTTGCCCAACGTGAGTTGATTCTGGGTTTTGCAATGCGTGCTGGA
TTTTCTGGTGGTGTGGTTGTCGATTTCCCGCATAGTACTAGGAGTAGAAAAGAATACTTT
GTCCTCACTTGTGGTCCACCCTCACTAAGCACAGCTGTCCCAAAGGCGAAAGGTGAAGAT
GGAGAGAGTTGCTCTGATGATGAGAGTAGTGGAGATGAAGAAAATCAAACAGTGTCCATT
TCAGACAGGCACAGACCAAGGAAAAAGCAGAAAATAACCAAGAAAGGGAGGGGGAGGGAA
TGGATACTGAAGAGGAAGGAACACATGAGGAGAAAAGGAAATACTGTGCCGCCAGATACA
AAATACACCGCTCGCAAACGAAAGGCTCGCTTTTGA

Peptide Sequence

PEP ID

VIT_11s0103g00250.t01
PEP Infomation

pep chromosome:12X:11:15909171:15915735:1 gene:VIT_11s0103g00250 transcript:VIT_11s0103g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSSRPELQAPPEIFYDDTEARKYTSSSRIIEIQAKLSERALELLALPDDGVPRLLLDIGC
GSGLSGETLSENGHQWIGLDISESMLNIASERDVDGDLLLGDMGQGLGLRPGVIDGAISI
SAVQWLCNADKSSHEPRLRLKAFFTSLYRCLARGARAVLQVYPENVAQRELILGFAMRAG
FSGGVVVDFPHSTRSRKEYFVLTCGPPSLSTAVPKAKGEDGESCSDDESSGDEENQTVSI
SDRHRPRKKQKITKKGRGREWILKRKEHMRRKGNTVPPDTKYTARKRKARF

Transcript Sequence

Transcript ID

VIT_11s0103g00250.t01
Transcript Infomation

cdna chromosome:12X:11:15909171:15915735:1 gene:VIT_11s0103g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTTTTCTTCTCACCGTAACCGACTGGAACAGAAGTAGAGGGATGTCGTCGAGGCCGGAAC
TTCAGGCGCCGCCAGAGATATTCTACGATGACACCGAAGCTCGCAAATACACTTCCTCTT
CTCGGATCATCGAAATTCAGGCTAAGCTCTCGGAAAGAGCATTGGAGCTGCTTGCTTTGC
CCGATGATGGAGTTCCCAGATTACTCCTTGACATTGGTTGTGGATCTGGACTTAGTGGGG
AGACACTGTCTGAGAATGGACACCAATGGATTGGTTTAGATATCTCAGAATCAATGCTTA
ATATTGCATCAGAGCGCGACGTTGATGGTGATCTATTGCTTGGAGACATGGGTCAGGGTT
TAGGACTTCGACCAGGAGTCATTGATGGTGCTATTAGCATCTCAGCAGTTCAGTGGTTAT
GCAATGCTGACAAGTCCTCGCACGAGCCACGGTTAAGATTGAAGGCTTTCTTTACATCAT
TATATAGATGCTTAGCAAGGGGAGCAAGAGCAGTGCTCCAAGTATATCCTGAAAATGTTG
CCCAACGTGAGTTGATTCTGGGTTTTGCAATGCGTGCTGGATTTTCTGGTGGTGTGGTTG
TCGATTTCCCGCATAGTACTAGGAGTAGAAAAGAATACTTTGTCCTCACTTGTGGTCCAC
CCTCACTAAGCACAGCTGTCCCAAAGGCGAAAGGTGAAGATGGAGAGAGTTGCTCTGATG
ATGAGAGTAGTGGAGATGAAGAAAATCAAACAGTGTCCATTTCAGACAGGCACAGACCAA
GGAAAAAGCAGAAAATAACCAAGAAAGGGAGGGGGAGGGAATGGATACTGAAGAGGAAGG
AACACATGAGGAGAAAAGGAAATACTGTGCCGCCAGATACAAAATACACCGCTCGCAAAC
GAAAGGCTCGCTTTTGATTCCCTTTGAGTGCTTGCTTATATCTGCAGAGTACATTTTAGG
AGGTTATTAAAGTGATGGCCTATTGCTGCTGCTGTTCTTTTGTTGCTTCCCTGACCTGGC
CTGACGGATAAGGTTAACAATTGGGTGAAATATGATCTGTAATGGGTTTGGTAAATTGAG
GGAACTGTTAAGCACCAGGCCAGTTTTTGAGAGTTTTAGGAAATTTATTTGAGAACCAAG
AGGGTGGTGTGGCTACAAATTTTGCTTTAATTTTAATTTAGTGCATTGAAGAATGGCTTC
CTG