Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0103g00130.t01
CDS Infomation

cds chromosome:12X:11:15655460:15663113:1 gene:VIT_11s0103g00130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATCTCTGCTAGTTTCGTTGGCAAGAGACTTCATCGTCTTTGTACTTGTTTATCT
TTCAAACTAGAATGTCTTGGCCGATCAATCTGGTTTCTAGTCTCATCCTTTTACAGCTTG
GTAGTTCTTCGGGTCAACCCTTTTTGGATTCAGCTTTGTTATTTCCCATGTCTTTCCTTT
CAGGGATTTTTGGTCCTCAAGGCTTTGAAGCCCAGGACTTATTCTTTTAGGCCTAGGAAC
TTGGATTTGTTCTTCACCTCAGTGTCGGCAGCCACTGTTTCTAGCATGTCCACAGTGGAA
ATGGAGGTTTTTTCCAACAACCAGCTTCTGATTTTGACGCTTCTCATGTTTGTAGGGGGA
GAGGTTTTCACTTCGATGGTAGAACTCCACTTGCGAAGGTCTAAACTTGAGAAGCCATGG
ATAGCAGAGAACAAAATCGATTCCGTTACTAGCATTAATGGCAGTGCTCCTCTGAGTCCT
GGAAAACCTTTTGGTCAAGTTGAGTTGCGGGTGGTAACCGTTCCTAGTACGGACAAGTAT
TCAAAACTAGAAACAGAGCAGGTTCATAGACAAATTGAGGGCCAAACTGAGTCATTGTCT
ACTAGTGAGTCTCTCAAATACCGTTCAATCAAATTTTTAGGGTTTGTGGTGATGGGGTAC
CTCGTAGTAGTTCATGTCGTTGGAGTCGCACTAGTGTCAGCTTACGTAGCCCTTGTGTCA
AGTGCCAGAGATGTACTAAAGCAAAAGGGCCTTAAGCTCTTCACCTTTTCACTCTTCACA
ACAGTTTCTACTTTTGCAAGCTGCGGTTTTGTCCCAACAAATGAAAACATGATAGTGTTC
AGCAGCAACTCTGGCCTGCTTCTTATCATCATTCCTCAGGTCCTTCTAGGGAACACCTTG
TTTCCATCCTGCCTGCGTTTCTCCATATGGACTCTGGGGAAGTTTTTCAACAAAGCCGAG
TCCAATTACCTACTGATGAACGCAAGGGAGATTGGATTTCTGTACTTGCTTCCTAGTCTC
CATTCCACTCTTTTGGTTCCTACTGTTCTGGGCTTCATCCTAATACAGTTCACTTTGCTT
TGCTCCATGGACTGGAATTCAGAAGGGTTGAATGGCCTGAATTCTTATCAGAAAATCATC
GGTGCCCTGTTCCAGAGCGTGAACTCAAGGCATACAGGCGAAACAATTGTGGATATCTCA
ATTCTCTCACCTGCCATCTTGGTGTTATTCGTCGTAATGATGTACCTTCCTCCTTATACT
TCTTTCCTACCCATAGAAGATTATGAACAGTCTTCACCAACATGCAGTGGAAGGAGAAGG
AGAAAAAGGGGAAAGATTGTGGAGAATCTAATATTCTCACAACTATCGTACTTGGTCATC
TTCATCATCCTTATCTGTATAACGGAGAGGAAAAATATGAAAGATGATCCTCTCAACTTC
ACTGTGTTAAATATTGTGATAGAAGTGATCAGTGCCTATGGAAATGTTGGGTTCACAGCA
GGCTACAGCTGTGAACGGTTGATGAAGCCTGATAGTAGTTGCCAAAGTAAATGGTTTGGA
TTCTCGGGAAAATGGAGCGATGAAGGGAAAATAATTCTCATTTTGGCCATGTTTTTTGGT
AGACTAAAGAAGTTTAATATGGATGGGGGTAGAGCATGGAAGCTCTTGTAA

Peptide Sequence

PEP ID

VIT_11s0103g00130.t01
PEP Infomation

pep chromosome:12X:11:15655460:15663113:1 gene:VIT_11s0103g00130 transcript:VIT_11s0103g00130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMISASFVGKRLHRLCTCLSFKLECLGRSIWFLVSSFYSLVVLRVNPFWIQLCYFPCLSF
QGFLVLKALKPRTYSFRPRNLDLFFTSVSAATVSSMSTVEMEVFSNNQLLILTLLMFVGG
EVFTSMVELHLRRSKLEKPWIAENKIDSVTSINGSAPLSPGKPFGQVELRVVTVPSTDKY
SKLETEQVHRQIEGQTESLSTSESLKYRSIKFLGFVVMGYLVVVHVVGVALVSAYVALVS
SARDVLKQKGLKLFTFSLFTTVSTFASCGFVPTNENMIVFSSNSGLLLIIIPQVLLGNTL
FPSCLRFSIWTLGKFFNKAESNYLLMNAREIGFLYLLPSLHSTLLVPTVLGFILIQFTLL
CSMDWNSEGLNGLNSYQKIIGALFQSVNSRHTGETIVDISILSPAILVLFVVMMYLPPYT
SFLPIEDYEQSSPTCSGRRRRKRGKIVENLIFSQLSYLVIFIILICITERKNMKDDPLNF
TVLNIVIEVISAYGNVGFTAGYSCERLMKPDSSCQSKWFGFSGKWSDEGKIILILAMFFG
RLKKFNMDGGRAWKLL

Transcript Sequence

Transcript ID

VIT_11s0103g00130.t01
Transcript Infomation

cdna chromosome:12X:11:15655460:15663113:1 gene:VIT_11s0103g00130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATCTCTGCTAGTTTCGTTGGCAAGAGACTTCATCGTCTTTGTACTTGTTTATCT
TTCAAACTAGAATGTCTTGGCCGATCAATCTGGTTTCTAGTCTCATCCTTTTACAGCTTG
GTAGTTCTTCGGGTCAACCCTTTTTGGATTCAGCTTTGTTATTTCCCATGTCTTTCCTTT
CAGGGATTTTTGGTCCTCAAGGCTTTGAAGCCCAGGACTTATTCTTTTAGGCCTAGGAAC
TTGGATTTGTTCTTCACCTCAGTGTCGGCAGCCACTGTTTCTAGCATGTCCACAGTGGAA
ATGGAGGTTTTTTCCAACAACCAGCTTCTGATTTTGACGCTTCTCATGTTTGTAGGGGGA
GAGGTTTTCACTTCGATGGTAGAACTCCACTTGCGAAGGTCTAAACTTGAGAAGCCATGG
ATAGCAGAGAACAAAATCGATTCCGTTACTAGCATTAATGGCAGTGCTCCTCTGAGTCCT
GGAAAACCTTTTGGTCAAGTTGAGTTGCGGGTGGTAACCGTTCCTAGTACGGACAAGTAT
TCAAAACTAGAAACAGAGCAGGTTCATAGACAAATTGAGGGCCAAACTGAGTCATTGTCT
ACTAGTGAGTCTCTCAAATACCGTTCAATCAAATTTTTAGGGTTTGTGGTGATGGGGTAC
CTCGTAGTAGTTCATGTCGTTGGAGTCGCACTAGTGTCAGCTTACGTAGCCCTTGTGTCA
AGTGCCAGAGATGTACTAAAGCAAAAGGGCCTTAAGCTCTTCACCTTTTCACTCTTCACA
ACAGTTTCTACTTTTGCAAGCTGCGGTTTTGTCCCAACAAATGAAAACATGATAGTGTTC
AGCAGCAACTCTGGCCTGCTTCTTATCATCATTCCTCAGGTCCTTCTAGGGAACACCTTG
TTTCCATCCTGCCTGCGTTTCTCCATATGGACTCTGGGGAAGTTTTTCAACAAAGCCGAG
TCCAATTACCTACTGATGAACGCAAGGGAGATTGGATTTCTGTACTTGCTTCCTAGTCTC
CATTCCACTCTTTTGGTTCCTACTGTTCTGGGCTTCATCCTAATACAGTTCACTTTGCTT
TGCTCCATGGACTGGAATTCAGAAGGGTTGAATGGCCTGAATTCTTATCAGAAAATCATC
GGTGCCCTGTTCCAGAGCGTGAACTCAAGGCATACAGGCGAAACAATTGTGGATATCTCA
ATTCTCTCACCTGCCATCTTGGTGTTATTCGTCGTAATGATGTACCTTCCTCCTTATACT
TCTTTCCTACCCATAGAAGATTATGAACAGTCTTCACCAACATGCAGTGGAAGGAGAAGG
AGAAAAAGGGGAAAGATTGTGGAGAATCTAATATTCTCACAACTATCGTACTTGGTCATC
TTCATCATCCTTATCTGTATAACGGAGAGGAAAAATATGAAAGATGATCCTCTCAACTTC
ACTGTGTTAAATATTGTGATAGAAGTGATCAGTGCCTATGGAAATGTTGGGTTCACAGCA
GGCTACAGCTGTGAACGGTTGATGAAGCCTGATAGTAGTTGCCAAAGTAAATGGTTTGGA
TTCTCGGGAAAATGGAGCGATGAAGGGAAAATAATTCTCATTTTGGCCATGTTTTTTGGT
AGACTAAAGAAGTTTAATATGGATGGGGGTAGAGCATGGAAGCTCTTGTAA