Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0078g00290.t01
CDS Infomation

cds chromosome:12X:11:12503302:12505054:1 gene:VIT_11s0078g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCCATCTTCTCAATAAGCCCGTATTTTTCAGTACTCTTCTCACAATCATTCTCCTC
TCATCCACTAGGTTGTTGGCCTCCTACTTGTCCATTTCTCCCCCCCTTATAGCTAGTTTT
CTCCCTTTGGCTCCTCTAATTCTATACCTTTTCTACTCAATTTCCAAGCGCTCCGCCTCC
CTCCCTCCAGGGCCTCTCTCCATACCACTATTTGGCAATTGGCTCCAAGTTGGGAATGAC
CTGAACCACCAGCTATTGGCCTCCATGGCACAAAAGTATGGTCCGGTTTTCCTACTAAAA
CTTGGGTCAAAAAACTTGGCAGTGGTGTCGGATCCTGAGTTGGCTAGCCAGGTGCTGCAC
ACACAAGGTGTGGAGTTTGGATCCCGGCCGCGGAATGTGGTGTTTGATATTTTCACGGGG
AACGGGCAGGACATGGTGTTCACCGTCTACGGCGACCACTGGCGGAAAATGCGTCGGATT
ATGACACTTCCATTCTTCACTAACAAGGTGGTGCACCACTACAGTGAAATGTGGGAGGAG
GAAATGGAGCTAGTGGTTGATGACCTGAGGAACAAGGAGAGTGTGAAGAGTGAAGGCCTG
GTTATCAGGAAGCGTCTGCAGTTGATGCTGTACAATATCATGTACCGGATGATGTTCGAT
TCCAAGTTTGAGTCTCAAGAGGATCCGCTGTTCATACAGGCAACGCGGTTTAACTCTGAA
AGAAGCCGGTTGGCTCAGAGTTTTGATTACAACTATGGAGACTTCATTCCTTTCCTTAGG
CCATTTTTGAGAGGTTACTTGAACAAGTGCAGGGAGCTGCAGAGCAGAAGGCTTGCATTT
TTCAACAACTACTTTGTTGAGAAAAGAAGGGAAATAATGGCTGCTAATGGAGAGAAGCAC
AAGATCAGGTGTGCCATTGATCACATAATAGATGCTCAACTCAAGGGAGAAATCAGTGAA
GCAAATGTGCTTTACATTGTGGAGAACATAAATGTTGCAGCTATAGAGACCACTCTGTGG
TCCATGGAATGGGCCATTGCTGAACTGGTTAACCATCCACATGTCCAATGCAAAATTCGG
GATGAAATCACCACCATCCTCCAGGGGGATGCAGTCACTGAATCCAACCTCCACCAACTT
CCATACCTACAGGCCACAGTGAAGGAGACCCTCAGGTTACACGCACCAATTCCCCTCCTC
GTACCTCATATGAACCTTGAAGAAGCTAAGCTTGGTGGTTATACCATCCCTAAAGAGTCC
AAGGTGGTGGTTAATGCCTGGTGGCTGGCCAACAACCCCAGTTGGTGGAAGAATCCTGAG
GAGTTCCGCCCAGAGCGCTTCCTGGAAGAGGAGTCTGGCACAGACGCTGTTGCAGGTGGG
AAGGTTGATTTTCGCTTCTTGCCATTTGGGGTGGGTAGGAGGAGTTGTCCAGGGATCATA
CTCGCCCTTCCCATCCTAGCACTTGTGATCGCCAAATTGGTCATGAACTTTGAAATGAGG
CCTCCAATCGGGGTGGAGAAGATTGACGTGTCCGAAAAAGGAGGCCAATTTAGCCTGCAC
ATCGCCAACCATTCTACAGTCGCTTTCACTCCAATCGCCGCATAG

Peptide Sequence

PEP ID

VIT_11s0078g00290.t01
PEP Infomation

pep chromosome:12X:11:12503302:12505054:1 gene:VIT_11s0078g00290 transcript:VIT_11s0078g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAHLLNKPVFFSTLLTIILLSSTRLLASYLSISPPLIASFLPLAPLILYLFYSISKRSAS
LPPGPLSIPLFGNWLQVGNDLNHQLLASMAQKYGPVFLLKLGSKNLAVVSDPELASQVLH
TQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHHYSEMWEE
EMELVVDDLRNKESVKSEGLVIRKRLQLMLYNIMYRMMFDSKFESQEDPLFIQATRFNSE
RSRLAQSFDYNYGDFIPFLRPFLRGYLNKCRELQSRRLAFFNNYFVEKRREIMAANGEKH
KIRCAIDHIIDAQLKGEISEANVLYIVENINVAAIETTLWSMEWAIAELVNHPHVQCKIR
DEITTILQGDAVTESNLHQLPYLQATVKETLRLHAPIPLLVPHMNLEEAKLGGYTIPKES
KVVVNAWWLANNPSWWKNPEEFRPERFLEEESGTDAVAGGKVDFRFLPFGVGRRSCPGII
LALPILALVIAKLVMNFEMRPPIGVEKIDVSEKGGQFSLHIANHSTVAFTPIAA

Transcript Sequence

Transcript ID

VIT_11s0078g00290.t01
Transcript Infomation

cdna chromosome:12X:11:12503302:12505054:1 gene:VIT_11s0078g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGAAGAAAAAACCATGGCCCATCTTCTCAATAAGCCCGTATTTTTCAGTACTCTTCTCAC
AATCATTCTCCTCTCATCCACTAGGTTGTTGGCCTCCTACTTGTCCATTTCTCCCCCCCT
TATAGCTAGTTTTCTCCCTTTGGCTCCTCTAATTCTATACCTTTTCTACTCAATTTCCAA
GCGCTCCGCCTCCCTCCCTCCAGGGCCTCTCTCCATACCACTATTTGGCAATTGGCTCCA
AGTTGGGAATGACCTGAACCACCAGCTATTGGCCTCCATGGCACAAAAGTATGGTCCGGT
TTTCCTACTAAAACTTGGGTCAAAAAACTTGGCAGTGGTGTCGGATCCTGAGTTGGCTAG
CCAGGTGCTGCACACACAAGGTGTGGAGTTTGGATCCCGGCCGCGGAATGTGGTGTTTGA
TATTTTCACGGGGAACGGGCAGGACATGGTGTTCACCGTCTACGGCGACCACTGGCGGAA
AATGCGTCGGATTATGACACTTCCATTCTTCACTAACAAGGTGGTGCACCACTACAGTGA
AATGTGGGAGGAGGAAATGGAGCTAGTGGTTGATGACCTGAGGAACAAGGAGAGTGTGAA
GAGTGAAGGCCTGGTTATCAGGAAGCGTCTGCAGTTGATGCTGTACAATATCATGTACCG
GATGATGTTCGATTCCAAGTTTGAGTCTCAAGAGGATCCGCTGTTCATACAGGCAACGCG
GTTTAACTCTGAAAGAAGCCGGTTGGCTCAGAGTTTTGATTACAACTATGGAGACTTCAT
TCCTTTCCTTAGGCCATTTTTGAGAGGTTACTTGAACAAGTGCAGGGAGCTGCAGAGCAG
AAGGCTTGCATTTTTCAACAACTACTTTGTTGAGAAAAGAAGGGAAATAATGGCTGCTAA
TGGAGAGAAGCACAAGATCAGGTGTGCCATTGATCACATAATAGATGCTCAACTCAAGGG
AGAAATCAGTGAAGCAAATGTGCTTTACATTGTGGAGAACATAAATGTTGCAGCTATAGA
GACCACTCTGTGGTCCATGGAATGGGCCATTGCTGAACTGGTTAACCATCCACATGTCCA
ATGCAAAATTCGGGATGAAATCACCACCATCCTCCAGGGGGATGCAGTCACTGAATCCAA
CCTCCACCAACTTCCATACCTACAGGCCACAGTGAAGGAGACCCTCAGGTTACACGCACC
AATTCCCCTCCTCGTACCTCATATGAACCTTGAAGAAGCTAAGCTTGGTGGTTATACCAT
CCCTAAAGAGTCCAAGGTGGTGGTTAATGCCTGGTGGCTGGCCAACAACCCCAGTTGGTG
GAAGAATCCTGAGGAGTTCCGCCCAGAGCGCTTCCTGGAAGAGGAGTCTGGCACAGACGC
TGTTGCAGGTGGGAAGGTTGATTTTCGCTTCTTGCCATTTGGGGTGGGTAGGAGGAGTTG
TCCAGGGATCATACTCGCCCTTCCCATCCTAGCACTTGTGATCGCCAAATTGGTCATGAA
CTTTGAAATGAGGCCTCCAATCGGGGTGGAGAAGATTGACGTGTCCGAAAAAGGAGGCCA
ATTTAGCCTGCACATCGCCAACCATTCTACAGTCGCTTTCACTCCAATCGCCGCATAGTT
TAGTCAAAA