Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0078g00250.t01
CDS Infomation

cds chromosome:12X:11:12443425:12449276:1 gene:VIT_11s0078g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTTTGAGAACAACAGCTGGATTTGGGAAGGGGTTTACCACTACCCACATCTCTTT
GGAGGTATAATGCTCACGGCCGCTGTGCTCGGGTTGTCGACCAGCTTTTTTGGTGGGATT
AGTGTTCCATCATCGTTGGCCTACTTTTGGCCTGATTTGGGAATTTTTCATAAGAGAAAA
CATGGAAAGAAACGGATTAGAGTTTACATGGATGGATGTTTTGATCTCATGCATTATGGC
CACGCGAATGCGTTGAGGCAGGCAAAGGCTCTAGGAGATGAATTGGTAGTAGGCGTTGTG
AGTGATGAGGAGATCATTGCCAATAAGGGTCCTCCTGTTTTATCCATGGAAGAGAGGCTT
GTTCTTGTAAGTGGGTTGAAGTGGGTAGATGAAGTCATTGCCAATGCTCCTTATGCAATT
ACTGAGCAGTTCATGGACACTCTCTTTAACGAGCACAAGATTGACTATATTATACATGGG
GATGATCCTTGCTTACTTCCAGATGGAACTGATGCTTATGCCTTGGCAAAGAAAGCTGGA
CGCTACAAGCAGATCAAACGCACTGAAGGTGTCTCCAGCACAGATATTGTAGGGAGGATA
CTTTCTTATATAAAAGATACAAAAACTCATGAAGATCATAATGGTAGTACATCTTTGCAT
GGAGAACGTGATAACACAAATGAAGCTGAAGGTGAAAAATGTCAATCCAAAGGTCTCCAC
TTATCTCATTTTCTACCCACATCTCGCCGGATTGTGCAATTTTCAAATGGCAAGGGACCT
GGACCGAACGCTCGTGTTGTATACATTGATGGAGCATTTGATCTCTTTCATGCGGGACAT
GTTGAGATACTCAAGAATGCTAGGCAGCTTGGAGACTTTCTCCTCGTTGGTATCCACACT
GACCAGACTGTTAGTGAACACAGAGGGGCCCACTATCCAATTATGCATCTACATGAGCGC
AGTCTTAGTGTACTGGCCTGCCGTTATGTCGATGAAGTGATCATTGGTGCACCTTGGGAC
GTTACAAAGGATATGATAACGACTTTCAACATATCTTTGGTTGTGCATGGGACAGTTGCT
GAGAGCAACTCTTTCTTAAATGGAGCACGTGATCCTTATGAAGTTCCTAAGAGCATGGGC
ATTTTCCACATGCTAGAAAGCCCCAAAGACATAACAACCACCTCAGTGGCCCAGAGGATA
ATAGCTAATCATGAGGCTTACATGAAACGCAATGTAAAGAAGGCAGAGAGTGAGAAGAAA
TACTATGCAGAGAAGAAATACGTTTCTGGAGAGTGA

Peptide Sequence

PEP ID

VIT_11s0078g00250.t01
PEP Infomation

pep chromosome:12X:11:12443425:12449276:1 gene:VIT_11s0078g00250 transcript:VIT_11s0078g00250.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDFENNSWIWEGVYHYPHLFGGIMLTAAVLGLSTSFFGGISVPSSLAYFWPDLGIFHKRK
HGKKRIRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERL
VLVSGLKWVDEVIANAPYAITEQFMDTLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKAG
RYKQIKRTEGVSSTDIVGRILSYIKDTKTHEDHNGSTSLHGERDNTNEAEGEKCQSKGLH
LSHFLPTSRRIVQFSNGKGPGPNARVVYIDGAFDLFHAGHVEILKNARQLGDFLLVGIHT
DQTVSEHRGAHYPIMHLHERSLSVLACRYVDEVIIGAPWDVTKDMITTFNISLVVHGTVA
ESNSFLNGARDPYEVPKSMGIFHMLESPKDITTTSVAQRIIANHEAYMKRNVKKAESEKK
YYAEKKYVSGE

Transcript Sequence

Transcript ID

VIT_11s0078g00250.t01
Transcript Infomation

cdna chromosome:12X:11:12443425:12449276:1 gene:VIT_11s0078g00250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGCTTTGTGTCTCCTCTTGAGGACAGAGGCCAGAGGGCAGCCTAGAACAAGAGAAGAGT
GGTGGGATCAATGGATTTTGAGAACAACAGCTGGATTTGGGAAGGGGTTTACCACTACCC
ACATCTCTTTGGAGGTATAATGCTCACGGCCGCTGTGCTCGGGTTGTCGACCAGCTTTTT
TGGTGGGATTAGTGTTCCATCATCGTTGGCCTACTTTTGGCCTGATTTGGGAATTTTTCA
TAAGAGAAAACATGGAAAGAAACGGATTAGAGTTTACATGGATGGATGTTTTGATCTCAT
GCATTATGGCCACGCGAATGCGTTGAGGCAGGCAAAGGCTCTAGGAGATGAATTGGTAGT
AGGCGTTGTGAGTGATGAGGAGATCATTGCCAATAAGGGTCCTCCTGTTTTATCCATGGA
AGAGAGGCTTGTTCTTGTAAGTGGGTTGAAGTGGGTAGATGAAGTCATTGCCAATGCTCC
TTATGCAATTACTGAGCAGTTCATGGACACTCTCTTTAACGAGCACAAGATTGACTATAT
TATACATGGGGATGATCCTTGCTTACTTCCAGATGGAACTGATGCTTATGCCTTGGCAAA
GAAAGCTGGACGCTACAAGCAGATCAAACGCACTGAAGGTGTCTCCAGCACAGATATTGT
AGGGAGGATACTTTCTTATATAAAAGATACAAAAACTCATGAAGATCATAATGGTAGTAC
ATCTTTGCATGGAGAACGTGATAACACAAATGAAGCTGAAGGTGAAAAATGTCAATCCAA
AGGTCTCCACTTATCTCATTTTCTACCCACATCTCGCCGGATTGTGCAATTTTCAAATGG
CAAGGGACCTGGACCGAACGCTCGTGTTGTATACATTGATGGAGCATTTGATCTCTTTCA
TGCGGGACATGTTGAGATACTCAAGAATGCTAGGCAGCTTGGAGACTTTCTCCTCGTTGG
TATCCACACTGACCAGACTGTTAGTGAACACAGAGGGGCCCACTATCCAATTATGCATCT
ACATGAGCGCAGTCTTAGTGTACTGGCCTGCCGTTATGTCGATGAAGTGATCATTGGTGC
ACCTTGGGACGTTACAAAGGATATGATAACGACTTTCAACATATCTTTGGTTGTGCATGG
GACAGTTGCTGAGAGCAACTCTTTCTTAAATGGAGCACGTGATCCTTATGAAGTTCCTAA
GAGCATGGGCATTTTCCACATGCTAGAAAGCCCCAAAGACATAACAACCACCTCAGTGGC
CCAGAGGATAATAGCTAATCATGAGGCTTACATGAAACGCAATGTAAAGAAGGCAGAGAG
TGAGAAGAAATACTATGCAGAGAAGAAATACGTTTCTGGAGAGTGAAGGCTCAAACTTGA
TACCCTATAAATTACCTCTCTACTTTTGCTATTGAAGGATGGAACGAGAAGGTAGCCGTA
GAAAGAAAGAGAACAGAGGCTTTAGATGATGCTCATTTTCGTCCTACTTCTTGTTGTATC
TTCTCCCTCAGAATAGAGATACCGATACAATAATTTATGCTAACCTTGACATGCTATCCC
TGCGTGTTTTTGAACAAACCATACTTTTTCTCTCCCTCCCTCCCTGTCTCTGCTCATTTT
TTGAAGGCATTTGTTATTCTGAT