Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0065g00940.t01
CDS Infomation

cds chromosome:12X:11:14929249:14964895:-1 gene:VIT_11s0065g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATGATAACGGTGAGAGAAGCTTCTTCCTCTGCCCTCTGCTTCAACCTCAACCTCTCG
AGGTCCTCTCATCCCGCTTCCACTGCCTCTCCAAGACTACGAAACTCCGTCTCAAGAGCC
AGCTTTGCTGTCCACACAAAACCCAACAGCACGCCGAATTCATGGAACCTTGCTCTCTTT
TGCAACAGCTGCAAAGGCCCAGTTTTTGACCCATTGGGCATCGATTCAGATAAATCTTTG
GGTCTCAATGCTACCTGGGAGAGTGCCCTAGGTTTACTGTCACAAACATTTGGGAGTACC
TCAAGTACAAAGAAGGATAAATCAGCTTCAGGTCAAGGAGTGGCAGCTGCAATTGAGGAT
AGTTCCATTGACTTTGGGGACTTCTTCAAAGGGCCATTACCAGGAAAATTTCTAAAGCTT
TTGGGGTTATTGGCCTTATCCCGCCTTGGAGTCTATGTACCTCTTGGTGGTGTAAACAGG
GAGGCCTTTGTTGGCAATTTAGATCAGAACAGTTTGTTGACCACTTTAGATTCATTTTCT
GGAGGCGGCATTGGTCGACTTGGGATATGCTCCCTTGGCATTGTTCCCTTTATCAATGCA
CAGATTGTATTTCAGCTTCTCACTCAAATTTATCCCAAGTTGCAAGACCTTCAGAAAAGA
GAAGGTGAAACAGGAAGAAAAAAAGTTCTTCAGTATACTCGCTATGCTTCAGTAGGTTTT
GCTCTAGTGCAGGCAATTGGGCAAGTACTTTTTCTCCGGCCCTATGTCAATGACTTTAGT
ACACAGTGGGTTCTATCTTCTGTTACTTTATTGACTCTTGGATCAGTACTTACTACATAT
ATTGGGGAAAGGATCTCTGACCTAAAACTTGGAAATGGTACATCCCTTCTAATCTTCACA
AGCATCATCTCCTACTTGCCAGCTTCTTTTGGTAGGACGGTTGCACAGGCATTTCAGGAT
GGTAACTACATTGGACTCGTCATCATCATAATCTCCTTCTTCCTCTTAGTCCTTGGTATT
GTGTATGTTCAGGAAGCAGAGAGGAAAATTCCACTTAATTATGCATCAAGATATACCAAC
AGAACTGGAGGCCTTCAAAAATCTGCTTACCTCCCTTTCAAGGTGAATAGTTCTGGGGTA
ATGCCGATCATATTTTCTACATCATCATTGGCTCTTCCTGGTACTGTGTCACGCTTTACT
GGATTAGCTGCACTAAAGAAGGCTGCATTGGCTTTAAATCCTGGGGGTTCTCTTTATCTC
CCAACCAACATACTTCTGATAGCCTTCTTCAACTACTATTACACTTTCCTACAATTGGAC
CCTGATGATGTGAGTGAACAGTTGAAACGTCAAGGTGCATCAATCCCACTTGTGCGACCC
GGTAAAAGTACAGCTGCATTTATTAAAATGGTACTGAGTCGGATATCAGTTCTTGGATCT
GGGTTTTTGGCAATACTGGCTGCTGGTCCCTCCTTGGTTGAACAAACCACGCACCTGACA
GCATTTCGGGGGTTTGCAGGCACGTCTGTTCTCATCCTTGTTGGTTGTGCTACAGACACA
GCAAGGAAAGTCCAAGCAGAGATAATTTCCCAGAAATATAAGAACATAGAATTTTATGAC
ATTGACAGGTTAGGCCGATAA

Peptide Sequence

PEP ID

VIT_11s0065g00940.t01
PEP Infomation

pep chromosome:12X:11:14929249:14964895:-1 gene:VIT_11s0065g00940 transcript:VIT_11s0065g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MMITVREASSSALCFNLNLSRSSHPASTASPRLRNSVSRASFAVHTKPNSTPNSWNLALF
CNSCKGPVFDPLGIDSDKSLGLNATWESALGLLSQTFGSTSSTKKDKSASGQGVAAAIED
SSIDFGDFFKGPLPGKFLKLLGLLALSRLGVYVPLGGVNREAFVGNLDQNSLLTTLDSFS
GGGIGRLGICSLGIVPFINAQIVFQLLTQIYPKLQDLQKREGETGRKKVLQYTRYASVGF
ALVQAIGQVLFLRPYVNDFSTQWVLSSVTLLTLGSVLTTYIGERISDLKLGNGTSLLIFT
SIISYLPASFGRTVAQAFQDGNYIGLVIIIISFFLLVLGIVYVQEAERKIPLNYASRYTN
RTGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTVSRFTGLAALKKAALALNPGGSLYL
PTNILLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFIKMVLSRISVLGS
GFLAILAAGPSLVEQTTHLTAFRGFAGTSVLILVGCATDTARKVQAEIISQKYKNIEFYD
IDRLGR

Transcript Sequence

Transcript ID

VIT_11s0065g00940.t01
Transcript Infomation

cdna chromosome:12X:11:14929249:14964895:-1 gene:VIT_11s0065g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAGACAGTGCGAGTGAACTTGGGGAGTAAATAATGATGATAACGGTGAGAGAAGCTTC
TTCCTCTGCCCTCTGCTTCAACCTCAACCTCTCGAGGTCCTCTCATCCCGCTTCCACTGC
CTCTCCAAGACTACGAAACTCCGTCTCAAGAGCCAGCTTTGCTGTCCACACAAAACCCAA
CAGCACGCCGAATTCATGGAACCTTGCTCTCTTTTGCAACAGCTGCAAAGGCCCAGTTTT
TGACCCATTGGGCATCGATTCAGATAAATCTTTGGGTCTCAATGCTACCTGGGAGAGTGC
CCTAGGTTTACTGTCACAAACATTTGGGAGTACCTCAAGTACAAAGAAGGATAAATCAGC
TTCAGGTCAAGGAGTGGCAGCTGCAATTGAGGATAGTTCCATTGACTTTGGGGACTTCTT
CAAAGGGCCATTACCAGGAAAATTTCTAAAGCTTTTGGGGTTATTGGCCTTATCCCGCCT
TGGAGTCTATGTACCTCTTGGTGGTGTAAACAGGGAGGCCTTTGTTGGCAATTTAGATCA
GAACAGTTTGTTGACCACTTTAGATTCATTTTCTGGAGGCGGCATTGGTCGACTTGGGAT
ATGCTCCCTTGGCATTGTTCCCTTTATCAATGCACAGATTGTATTTCAGCTTCTCACTCA
AATTTATCCCAAGTTGCAAGACCTTCAGAAAAGAGAAGGTGAAACAGGAAGAAAAAAAGT
TCTTCAGTATACTCGCTATGCTTCAGTAGGTTTTGCTCTAGTGCAGGCAATTGGGCAAGT
ACTTTTTCTCCGGCCCTATGTCAATGACTTTAGTACACAGTGGGTTCTATCTTCTGTTAC
TTTATTGACTCTTGGATCAGTACTTACTACATATATTGGGGAAAGGATCTCTGACCTAAA
ACTTGGAAATGGTACATCCCTTCTAATCTTCACAAGCATCATCTCCTACTTGCCAGCTTC
TTTTGGTAGGACGGTTGCACAGGCATTTCAGGATGGTAACTACATTGGACTCGTCATCAT
CATAATCTCCTTCTTCCTCTTAGTCCTTGGTATTGTGTATGTTCAGGAAGCAGAGAGGAA
AATTCCACTTAATTATGCATCAAGATATACCAACAGAACTGGAGGCCTTCAAAAATCTGC
TTACCTCCCTTTCAAGGTGAATAGTTCTGGGGTAATGCCGATCATATTTTCTACATCATC
ATTGGCTCTTCCTGGTACTGTGTCACGCTTTACTGGATTAGCTGCACTAAAGAAGGCTGC
ATTGGCTTTAAATCCTGGGGGTTCTCTTTATCTCCCAACCAACATACTTCTGATAGCCTT
CTTCAACTACTATTACACTTTCCTACAATTGGACCCTGATGATGTGAGTGAACAGTTGAA
ACGTCAAGGTGCATCAATCCCACTTGTGCGACCCGGTAAAAGTACAGCTGCATTTATTAA
AATGGTACTGAGTCGGATATCAGTTCTTGGATCTGGGTTTTTGGCAATACTGGCTGCTGG
TCCCTCCTTGGTTGAACAAACCACGCACCTGACAGCATTTCGGGGGTTTGCAGGCACGTC
TGTTCTCATCCTTGTTGGTTGTGCTACAGACACAGCAAGGAAAGTCCAAGCAGAGATAAT
TTCCCAGAAATATAAGAACATAGAATTTTATGACATTGACAGGTTAGGCCGATAAAAGGA
TCCAAGTAGAGGAGTTTTCCATGTAGATGGATAATTTCCTATTGCCTTCCAAAGCCTCTG
TATTTGGCATTTTTGTTTTTATTTTATTTATTTATTTACAATTTACAATGGTTTAATGGG
GCATCCAGCTTTGAATATGGTGAC