Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0065g00360.t01
CDS Infomation

cds chromosome:12X:11:14110808:14125975:1 gene:VIT_11s0065g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGACGACCATGAATGTTTGCAAATCTGTAATCTCGCCTCCAGGTTTATTTGTGGGG
ACACCTCAAGGAATCAGGAGTTCTCAATGTAGTTTTATGGTGGGAAAGAAGGTGAACTTT
CCTAGGCAAGTAGCTCAGGTTGCACGAGTTCGCAGTAAGTCTAAGAAACATGGGGGAGCT
CTAGGTGCTACATGTCGTAATGACAAAATCCTGGTGGCAAACAGAGGAGAAATTGCTGTG
CGTGTGATTCGAACAGCTCATGAGATGGGGATACCTTGTGTTGCAGTTTACTCAACCATA
GACAGGGATGCGCTTCATGTAAAATTGGCTGATGAATCAGTTTGCATAGGTGAAGCACCA
AGCAGTCAATCGTATTTATTGATCCCAAATGTTCTATCAGCTGCAATAAGTCATGGATGT
ACAATGCTTCACCCTGGATATGGGTTCCTTGCTGAAAATGCAACTTTTGTTGAAATGTGC
AGAGAGCATGGAATCAACTTTATTGGACCTAATCCTGACAGTATTCGTGTTATGGGTGAC
AAATCAACTGCTAGAGACACAATGAAGAATGCCGGAGTTCCTACTGTACCAGGAAGTGAA
GGATTGTTAAAGAGCACAGAAGAAGGTATCAAGCTTGCCAATGAGATTGGCTATCCTGTG
ATGATCAAGGCAACAGCTGGTGGTGGAGGACGTGGAATGCGCCTTGCTAAAGAACCTGAT
GAGTTTGTGAAATTGTTACAGCAAGCAAAGAGTGAAGCTGCAGCTGCATTTGGAAATGAT
GGAGTTTATCTGGAAAAATACATTCAAAATCCAAGGCACATTGAGTTCCAGGTTCTTGCA
GATAAGTTTGGAAATGTGGTCCACTTTGGAGAGCGTGATTGCAGCATTCAGAGAAGGAAC
CAGAAGCTCTTGGAAGAAGCACCGTCTCCTGCATTGACCTCAGAGTTGCGGAAAGCCATG
GGTGATGCAGCAGTTGCAGCAGCAGCATCCATAGGTTATATTGGTGTTGGAACGGTTGAG
TTCCTTTTGGATGAAAGAGGTTCCTTTTACTTTATGGAAATGAATACTAGGATCCAGGTT
GAGCATCCTGTGACAGAAATGATTTCGTCTGTTGACTTGATTGAGGAACAAATTCGTGTA
GCTATGGGAGAGAAACTTCACTACAAACAGGAAGACATTGTGCTTAGAGGTCATTCAATT
GAATGCCGTATTAATGCTGAGGATGCTTTTAAAAACTTCAGACCTGGGCCAGGGAGAATA
ACAGCATACTTGCCGGCTGGAGGCCCATTTGTGAGAATGGATAGCCATGTTTATCCTGAT
TATGTGGTTCCCCCAAGCTATGATTCCCTTCTTGGAAAGCTTATTGTATGGGCTCCAACA
AGGGAGAGGGCAATTGAACGCATGAAAAGGGCTCTTAATGATACTGTTATTACAGGGGTT
CCTACAACCATTGATTACCATAAACTTATACTTGATATTGAGGACTTCAGAAATGGCAAG
GTTGATACAGCCTTTATTCCTAAGCATGAGGAGGAGTTAGCAGCGCCCCTAGCAATTGTG
AATGCGACAGTAGCTTGA

Peptide Sequence

PEP ID

VIT_11s0065g00360.t01
PEP Infomation

pep chromosome:12X:11:14110808:14125975:1 gene:VIT_11s0065g00360 transcript:VIT_11s0065g00360.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

METTMNVCKSVISPPGLFVGTPQGIRSSQCSFMVGKKVNFPRQVAQVARVRSKSKKHGGA
LGATCRNDKILVANRGEIAVRVIRTAHEMGIPCVAVYSTIDRDALHVKLADESVCIGEAP
SSQSYLLIPNVLSAAISHGCTMLHPGYGFLAENATFVEMCREHGINFIGPNPDSIRVMGD
KSTARDTMKNAGVPTVPGSEGLLKSTEEGIKLANEIGYPVMIKATAGGGGRGMRLAKEPD
EFVKLLQQAKSEAAAAFGNDGVYLEKYIQNPRHIEFQVLADKFGNVVHFGERDCSIQRRN
QKLLEEAPSPALTSELRKAMGDAAVAAAASIGYIGVGTVEFLLDERGSFYFMEMNTRIQV
EHPVTEMISSVDLIEEQIRVAMGEKLHYKQEDIVLRGHSIECRINAEDAFKNFRPGPGRI
TAYLPAGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTRERAIERMKRALNDTVITGV
PTTIDYHKLILDIEDFRNGKVDTAFIPKHEEELAAPLAIVNATVA

Transcript Sequence

Transcript ID

VIT_11s0065g00360.t01
Transcript Infomation

cdna chromosome:12X:11:14110808:14125975:1 gene:VIT_11s0065g00360 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGGCGGAGCATTCAATCTCCCACTCTCCTCGTTCTTATCGACGCTTTCTTCTTCAAATCT
CAACCCCCCTTTCTCTCTCTCTATCTGCATTTCTTCTCTCAAACCTTCCATTGTTCTCTG
CATTTCCATTGGGTTTTGGTTCGGAGATGGAGACGACCATGAATGTTTGCAAATCTGTAA
TCTCGCCTCCAGGTTTATTTGTGGGGACACCTCAAGGAATCAGGAGTTCTCAATGTAGTT
TTATGGTGGGAAAGAAGGTGAACTTTCCTAGGCAAGTAGCTCAGGTTGCACGAGTTCGCA
GTAAGTCTAAGAAACATGGGGGAGCTCTAGGTGCTACATGTCGTAATGACAAAATCCTGG
TGGCAAACAGAGGAGAAATTGCTGTGCGTGTGATTCGAACAGCTCATGAGATGGGGATAC
CTTGTGTTGCAGTTTACTCAACCATAGACAGGGATGCGCTTCATGTAAAATTGGCTGATG
AATCAGTTTGCATAGGTGAAGCACCAAGCAGTCAATCGTATTTATTGATCCCAAATGTTC
TATCAGCTGCAATAAGTCATGGATGTACAATGCTTCACCCTGGATATGGGTTCCTTGCTG
AAAATGCAACTTTTGTTGAAATGTGCAGAGAGCATGGAATCAACTTTATTGGACCTAATC
CTGACAGTATTCGTGTTATGGGTGACAAATCAACTGCTAGAGACACAATGAAGAATGCCG
GAGTTCCTACTGTACCAGGAAGTGAAGGATTGTTAAAGAGCACAGAAGAAGGTATCAAGC
TTGCCAATGAGATTGGCTATCCTGTGATGATCAAGGCAACAGCTGGTGGTGGAGGACGTG
GAATGCGCCTTGCTAAAGAACCTGATGAGTTTGTGAAATTGTTACAGCAAGCAAAGAGTG
AAGCTGCAGCTGCATTTGGAAATGATGGAGTTTATCTGGAAAAATACATTCAAAATCCAA
GGCACATTGAGTTCCAGGTTCTTGCAGATAAGTTTGGAAATGTGGTCCACTTTGGAGAGC
GTGATTGCAGCATTCAGAGAAGGAACCAGAAGCTCTTGGAAGAAGCACCGTCTCCTGCAT
TGACCTCAGAGTTGCGGAAAGCCATGGGTGATGCAGCAGTTGCAGCAGCAGCATCCATAG
GTTATATTGGTGTTGGAACGGTTGAGTTCCTTTTGGATGAAAGAGGTTCCTTTTACTTTA
TGGAAATGAATACTAGGATCCAGGTTGAGCATCCTGTGACAGAAATGATTTCGTCTGTTG
ACTTGATTGAGGAACAAATTCGTGTAGCTATGGGAGAGAAACTTCACTACAAACAGGAAG
ACATTGTGCTTAGAGGTCATTCAATTGAATGCCGTATTAATGCTGAGGATGCTTTTAAAA
ACTTCAGACCTGGGCCAGGGAGAATAACAGCATACTTGCCGGCTGGAGGCCCATTTGTGA
GAATGGATAGCCATGTTTATCCTGATTATGTGGTTCCCCCAAGCTATGATTCCCTTCTTG
GAAAGCTTATTGTATGGGCTCCAACAAGGGAGAGGGCAATTGAACGCATGAAAAGGGCTC
TTAATGATACTGTTATTACAGGGGTTCCTACAACCATTGATTACCATAAACTTATACTTG
ATATTGAGGACTTCAGAAATGGCAAGGTTGATACAGCCTTTATTCCTAAGCATGAGGAGG
AGTTAGCAGCGCCCCTAGCAATTGTGAATGCGACAGTAGCTTGAATTTATAGGCGGGATC
TGTCGTAGTTGAAGCAGAGTCATGTTGGAATTGGTAGAACGTTTACAACAGGAAACATTG
TTGCTTTCACGGTCTCATTTTTTCCTTTAGAATAAGAAGCTTTTGTTTATTTAGTACAGT
GAATTGTAAGAGGATGTTTGTTTTATGTTTGGGGAAAAAGAAAATTGGTGTGTTGTTGAA
ATGAAAATGATTTTGACGAGGTTAGCCGTGCTGCCA