Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0065g00290.t01
CDS Infomation

cds chromosome:12X:11:13921828:13939838:1 gene:VIT_11s0065g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACTGGGACAACAATGTTCCATCACATGCCCCAGGCCCAGAGAACAATATTGACATT
GTTTATATGGCTATGTGTCATCCATCTCTTGCAGCCAGCTGGTTGGAATTTAAAAAAGGA
GTATCTACCTGCAGGTTGGCTCTGTTTGGAAAAATTGGATATGGGACATTTAGTGAAGCT
CTAGCATATAAGTTACCATTTGTCTTTGTACGCAGAGATTATTTTAATGAAGAACCATTT
TTAAGAAATATGCTCGAGTACTACCAAGGTGGAATTGAGATGATTAGGAGAGACTTTCTC
ACTGGACGTTGGATACCATATCTTGAACGTGCTATTAGTTTGAAACCATGCTATCAGGGA
GGCAGCAATGGTGGTGAGGTTGCTGCTTGCATACTGCAGGATACAGCTGTTGGAAAACAT
TATGCTTCTGATAAGTTTAGTGGAGCAAGGAGACTGCAAGACGCAATTGTGCTTGGGTAT
CAATTACAAAGAGCTGTTGGTAAAGATATTTGCATCCCATACTGGTATAGCCTTGCAGCA
AATGAGCTTAGTCTTCATACTGCATTGCCAACTATTGAAACAACCAAAACAACCTCCATA
ACAGAAGTATGCACAGAAAACTTTGAAATTCTTCATGGAGATATTCATGGTCTTTCAGAT
ACTGCTAGTTTCTTAAAAAGCTTGGCAAGATTAGATGCTTCATATGACTCAGGGAAGAAC
ACTAAGTGCCAAATGCGGGAACGTGTGGCTGCTGCTGCATTATTTAACTGGGAGGAGGAA
ATCTTTGTAGCAAGAGCGCCTGGGAGATTAGATGTAATGGGAGGGATTGCAGACTATTCA
GGAAGCCTTGTTTTGCAGATGCCTATCAGAGAAGCATGCCATGTTGCAGTACAGAAAAAT
GATCCAAGCAAGCAGAAGCTATGGAAACATGTCCAGGCTAGGCAGCATATTGATGGACAA
GGACCAAAGCCCATTCTTCAAATTGTATCATTTGGGTCTGAATTGAGTAATCGTGGACCA
ACATTTGACATGGATTTATCTGATTTTCTGCAAGGCGAGCAACCAATATCATATAAGAAG
GCAAAGGAGTACTTTGCTCGAGATCCAGCCCAGAAATGGGCCGCATATGTCGCAGGGACA
ATTCTGGTGTTAATGAGAGAGTTGGGTGTTCGTTTTGAAAACAGTATTAGTATTGTGGTT
TCTTCTGCAGTTCCAGAAGGCAAAGGTGTATCTTCTTCTGCTGCAGTAGAGGTTGCTAGC
ATGTCTGCTATTGCTGCCTCTCATGGGTTAAACATTGCCCCAAGAGACCTTGCTTTACTT
TGTCAAAAGGCATGTATATGCCTCATATCTTTTGTGGAGAATCACATTGTTGGAGCTCCA
TGTGGGGTGATGGACCAGATGGCTTCTGTGTGTGGTGAAGCAAACAAGCTTCTCGCAATG
GTGTGCCAGCCTGCTGAGGTGCTGGGACTCGTGGAAATCCCTTCACATATACAATTTTGG
GGAATTGATTCCGGAATACGACACAGATTTGGAAAGGATGAACAGATGAAACTCATCTGT
GATAACCAGGCCGCATTACATATTGCATCCAATCCCGTCTTTCATGAAAGGACCAAGCAT
ATTGAAGTTGACTGTCATTTTATTAGAGAGAAGATCGCATCAGGATGTATTGCTACAAGT
TTTGTCAATTCAAATGATCAACTAGCAGACATCTTCACTAAATCTCTCAGAGGTCCTAGG
ATTAAATATATTTGTAACAAGCTTGGTGCATATGACGTATATGCTCCAGCTTGA

Peptide Sequence

PEP ID

VIT_11s0065g00290.t01
PEP Infomation

pep chromosome:12X:11:13921828:13939838:1 gene:VIT_11s0065g00290 transcript:VIT_11s0065g00290.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDWDNNVPSHAPGPENNIDIVYMAMCHPSLAASWLEFKKGVSTCRLALFGKIGYGTFSEA
LAYKLPFVFVRRDYFNEEPFLRNMLEYYQGGIEMIRRDFLTGRWIPYLERAISLKPCYQG
GSNGGEVAACILQDTAVGKHYASDKFSGARRLQDAIVLGYQLQRAVGKDICIPYWYSLAA
NELSLHTALPTIETTKTTSITEVCTENFEILHGDIHGLSDTASFLKSLARLDASYDSGKN
TKCQMRERVAAAALFNWEEEIFVARAPGRLDVMGGIADYSGSLVLQMPIREACHVAVQKN
DPSKQKLWKHVQARQHIDGQGPKPILQIVSFGSELSNRGPTFDMDLSDFLQGEQPISYKK
AKEYFARDPAQKWAAYVAGTILVLMRELGVRFENSISIVVSSAVPEGKGVSSSAAVEVAS
MSAIAASHGLNIAPRDLALLCQKACICLISFVENHIVGAPCGVMDQMASVCGEANKLLAM
VCQPAEVLGLVEIPSHIQFWGIDSGIRHRFGKDEQMKLICDNQAALHIASNPVFHERTKH
IEVDCHFIREKIASGCIATSFVNSNDQLADIFTKSLRGPRIKYICNKLGAYDVYAPA

Transcript Sequence

Transcript ID

VIT_11s0065g00290.t01
Transcript Infomation

cdna chromosome:12X:11:13921828:13939838:1 gene:VIT_11s0065g00290 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGACTGGGACAACAATGTTCCATCACATGCCCCAGGCCCAGAGAACAATATTGACATT
GTTTATATGGCTATGTGTCATCCATCTCTTGCAGCCAGCTGGTTGGAATTTAAAAAAGGA
GTATCTACCTGCAGGTTGGCTCTGTTTGGAAAAATTGGATATGGGACATTTAGTGAAGCT
CTAGCATATAAGTTACCATTTGTCTTTGTACGCAGAGATTATTTTAATGAAGAACCATTT
TTAAGAAATATGCTCGAGTACTACCAAGGTGGAATTGAGATGATTAGGAGAGACTTTCTC
ACTGGACGTTGGATACCATATCTTGAACGTGCTATTAGTTTGAAACCATGCTATCAGGGA
GGCAGCAATGGTGGTGAGGTTGCTGCTTGCATACTGCAGGATACAGCTGTTGGAAAACAT
TATGCTTCTGATAAGTTTAGTGGAGCAAGGAGACTGCAAGACGCAATTGTGCTTGGGTAT
CAATTACAAAGAGCTGTTGGTAAAGATATTTGCATCCCATACTGGTATAGCCTTGCAGCA
AATGAGCTTAGTCTTCATACTGCATTGCCAACTATTGAAACAACCAAAACAACCTCCATA
ACAGAAGTATGCACAGAAAACTTTGAAATTCTTCATGGAGATATTCATGGTCTTTCAGAT
ACTGCTAGTTTCTTAAAAAGCTTGGCAAGATTAGATGCTTCATATGACTCAGGGAAGAAC
ACTAAGTGCCAAATGCGGGAACGTGTGGCTGCTGCTGCATTATTTAACTGGGAGGAGGAA
ATCTTTGTAGCAAGAGCGCCTGGGAGATTAGATGTAATGGGAGGGATTGCAGACTATTCA
GGAAGCCTTGTTTTGCAGATGCCTATCAGAGAAGCATGCCATGTTGCAGTACAGAAAAAT
GATCCAAGCAAGCAGAAGCTATGGAAACATGTCCAGGCTAGGCAGCATATTGATGGACAA
GGACCAAAGCCCATTCTTCAAATTGTATCATTTGGGTCTGAATTGAGTAATCGTGGACCA
ACATTTGACATGGATTTATCTGATTTTCTGCAAGGCGAGCAACCAATATCATATAAGAAG
GCAAAGGAGTACTTTGCTCGAGATCCAGCCCAGAAATGGGCCGCATATGTCGCAGGGACA
ATTCTGGTGTTAATGAGAGAGTTGGGTGTTCGTTTTGAAAACAGTATTAGTATTGTGGTT
TCTTCTGCAGTTCCAGAAGGCAAAGGTGTATCTTCTTCTGCTGCAGTAGAGGTTGCTAGC
ATGTCTGCTATTGCTGCCTCTCATGGGTTAAACATTGCCCCAAGAGACCTTGCTTTACTT
TGTCAAAAGGCATGTATATGCCTCATATCTTTTGTGGAGAATCACATTGTTGGAGCTCCA
TGTGGGGTGATGGACCAGATGGCTTCTGTGTGTGGTGAAGCAAACAAGCTTCTCGCAATG
GTGTGCCAGCCTGCTGAGGTGCTGGGACTCGTGGAAATCCCTTCACATATACAATTTTGG
GGAATTGATTCCGGAATACGACACAGATTTGGAAAGGATGAACAGATGAAACTCATCTGT
GATAACCAGGCCGCATTACATATTGCATCCAATCCCGTCTTTCATGAAAGGACCAAGCAT
ATTGAAGTTGACTGTCATTTTATTAGAGAGAAGATCGCATCAGGATGTATTGCTACAAGT
TTTGTCAATTCAAATGATCAACTAGCAGACATCTTCACTAAATCTCTCAGAGGTCCTAGG
ATTAAATATATTTGTAACAAGCTTGGTGCATATGACGTATATGCTCCAGCTTGA