Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0065g00160.t01
CDS Infomation

cds chromosome:12X:11:13546517:13555008:-1 gene:VIT_11s0065g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAGAGAATGCTCAACAGGAACGGGGCCGAAGCGCCTCTACAGGAGAGAGACCTGTT
GAACCAGCTAACTTGAGAGAACAGCCAAATTTGCTTGAAGATGAAAGGGTTCCAAGAGTT
GTCGCAGATCAACCGATATCTTTTGATGCAATTGGAGATTTTAATGCTGGTTACCCACAG
GATGCCTATGCTTCTATTAACCGACCTTTTTATTATGGAGGCTATGACAATAGTACCAGT
TATTGGGATGGATATCCTCATTATGTTAATGCTGATAGCATGCAAGTTTTTCCTCCGGTT
ATCTACAATGATAATCCATCTCTTGTGTTTAGTTCGGGTTATGGCTTTAATCCTCAAATG
GCATATGGACAATATACCAATGTTGCTACCCCTCTTCCTTCTCTAATGGTGGATAGGCAG
CTATACTCCCCACATCAAAATCCATTCTCTCAACCTTATTATCCACAATCAATTCCTAGT
GTGCCGAACATATCTTCAGCAGTTTCAGTTCCTCAAACTGAGCTGATGGCACCAGAAAGT
AGCGTCCAAGAGGGTTTCAGTGGCAACATGCGTTCTAGTCAAGGATCAAGTTATGTCATA
CAGTTCGGATCTTTTGGTAGAGGGGGCCTTTCACAAAATTCTGCCTATGGTCCTGGTTCA
TCTAATTTTCAGGGGGAGTTTGTACCACCCAACTTCTTGCCTAATCAATCAAATCTTCCA
GAAGCAGATGTGTCTTTGTCTTCAGTGACGTCTCAGGCAGCTCATCCCCAACCAGTTGGA
ATACTTGGTTCATACGAGCTCAATGTTAGACAGAGAGCAGCACATGGACTGGGATTGGTA
CCAAGTTCCTCTAACATATTCTACCCAGATGGTGGCCTTTATGAGAGCACTAACTTTGGT
GGTGCATCTGTTTCTCCGTTGGGAGCTAATGATCGGAACAGACTCATTCTTGACAAGGGA
AAAATACGAGAAAGGGATCGAAGTTCAGGTGTCTTTTCAACTGATTCGTCTAACTTCTCC
AGTGACCGTAATCGGGGACCAAGGGCTTCAAAGCCAAAGGGCCAGAGCACCTCTGGACAG
GGAGTTTCCTCTTCTTCCAGAAAAAGTGATGCATCAAATTCTGTGGTTCACTTTGATTCA
TACAACCAACCAGATTTTGTTACAGATTACGAGAATGCCAAGTTCTTTATAATCAAGTCT
TACAGTGAAGATAATGTTCACAGAAGTATCAAATACAGCGTTTGGGCCAGCACAGCACTT
GGAAACCGTAAATTGGATGCTGCTTATCAAAAAGCAAAGGAGATAGAGACCAATTGTCCA
ATCTTCCTGTGTTTCTCGGTCAATGCTAGTTCGCAGTTTTGTGGAGTAGCAGAAATGGTT
GGACCTGTAAATTTTGAGAAAGATGCAGAATACTGGCAGCAGGATAGGTGGAGTGGGTTG
TTCCCGGTCAAGTGGCATATTATCAAAGATGTACCTAACAGTCTATTTCGTCACATACTA
CTAGAAAATAATGAAAACAAGCCTGTTACTCACAGCCGAGACACACAAGAGGTGAATTTG
GAACAGGGTATCGAGATGTTAAAAATTTTTAAGTCTTATGATGCACATACATCCATCCTA
GAAGATTTTGATTTCTATGAACAAAGGGAGAGAGCTTCAAAGGAAAGAAAGGCCAGACAG
CAAGCTTGTTCAACAACAAAAAGTCCAGGTTCTGAGGAGTCTGTAAACCATGTTTCCAAT
AGCTTTTCTCAATCCCTCCAGTTGGAAGAGAGTGATAGGGAAGTAATAGCAACTGAATGG
GGTGACAATTCAAGGACAGAATCAGGGGCCCACTGCTTGGAAGAGAGTGGTGAAGCAGTG
GAACCTGAAAGGGGTTGTAGCACTACAACAGGTGCTCTGGTTTCACTTGCTGATGACTCC
ATGAACCAAATGTCTGATAGCTTTGCTCAAACACTACGGTTGGAAGGGAGTATTAAAGAA
TTGAGAGCTGCTTCTAGCTCAGGAACTGATGCTGAGGTTTCACTTGATGATGCCATAACC
CTAATGACTTTAGAATCCAAAAAGAATAATAAAGAACTACCAAGAGCTGGAAGGATTAAC
AGCCCAAGACCAGATGCTTTTGTTTTACTTGTTGATTACCCCAAGGGCCAAATATCTGAT
AGCTCTGTTCAATCCCCACAGTTGGAAGAGAGTAGTAAAGAAGTGTAG

Peptide Sequence

PEP ID

VIT_11s0065g00160.t01
PEP Infomation

pep chromosome:12X:11:13546517:13555008:-1 gene:VIT_11s0065g00160 transcript:VIT_11s0065g00160.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAENAQQERGRSASTGERPVEPANLREQPNLLEDERVPRVVADQPISFDAIGDFNAGYPQ
DAYASINRPFYYGGYDNSTSYWDGYPHYVNADSMQVFPPVIYNDNPSLVFSSGYGFNPQM
AYGQYTNVATPLPSLMVDRQLYSPHQNPFSQPYYPQSIPSVPNISSAVSVPQTELMAPES
SVQEGFSGNMRSSQGSSYVIQFGSFGRGGLSQNSAYGPGSSNFQGEFVPPNFLPNQSNLP
EADVSLSSVTSQAAHPQPVGILGSYELNVRQRAAHGLGLVPSSSNIFYPDGGLYESTNFG
GASVSPLGANDRNRLILDKGKIRERDRSSGVFSTDSSNFSSDRNRGPRASKPKGQSTSGQ
GVSSSSRKSDASNSVVHFDSYNQPDFVTDYENAKFFIIKSYSEDNVHRSIKYSVWASTAL
GNRKLDAAYQKAKEIETNCPIFLCFSVNASSQFCGVAEMVGPVNFEKDAEYWQQDRWSGL
FPVKWHIIKDVPNSLFRHILLENNENKPVTHSRDTQEVNLEQGIEMLKIFKSYDAHTSIL
EDFDFYEQRERASKERKARQQACSTTKSPGSEESVNHVSNSFSQSLQLEESDREVIATEW
GDNSRTESGAHCLEESGEAVEPERGCSTTTGALVSLADDSMNQMSDSFAQTLRLEGSIKE
LRAASSSGTDAEVSLDDAITLMTLESKKNNKELPRAGRINSPRPDAFVLLVDYPKGQISD
SSVQSPQLEESSKEV

Transcript Sequence

Transcript ID

VIT_11s0065g00160.t01
Transcript Infomation

cdna chromosome:12X:11:13546517:13555008:-1 gene:VIT_11s0065g00160 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAAAACCCTCTCCTGCTGTTGCTGTTGCTGTTGCTTCTTCTCTTTCTCTGTTTTATTTTC
TACCAACTTCGAAATCGAAATTTGGCCGGGATTCCATTTTGATTTGCTTTGTTTTTTCTG
GGCTGGAATTGCATTCCCATTGAATCTTGCAGATCTTTGTTTCTCGCTGATTTATGGCAG
AGAATGCTCAACAGGAACGGGGCCGAAGCGCCTCTACAGGAGAGAGACCTGTTGAACCAG
CTAACTTGAGAGAACAGCCAAATTTGCTTGAAGATGAAAGGGTTCCAAGAGTTGTCGCAG
ATCAACCGATATCTTTTGATGCAATTGGAGATTTTAATGCTGGTTACCCACAGGATGCCT
ATGCTTCTATTAACCGACCTTTTTATTATGGAGGCTATGACAATAGTACCAGTTATTGGG
ATGGATATCCTCATTATGTTAATGCTGATAGCATGCAAGTTTTTCCTCCGGTTATCTACA
ATGATAATCCATCTCTTGTGTTTAGTTCGGGTTATGGCTTTAATCCTCAAATGGCATATG
GACAATATACCAATGTTGCTACCCCTCTTCCTTCTCTAATGGTGGATAGGCAGCTATACT
CCCCACATCAAAATCCATTCTCTCAACCTTATTATCCACAATCAATTCCTAGTGTGCCGA
ACATATCTTCAGCAGTTTCAGTTCCTCAAACTGAGCTGATGGCACCAGAAAGTAGCGTCC
AAGAGGGTTTCAGTGGCAACATGCGTTCTAGTCAAGGATCAAGTTATGTCATACAGTTCG
GATCTTTTGGTAGAGGGGGCCTTTCACAAAATTCTGCCTATGGTCCTGGTTCATCTAATT
TTCAGGGGGAGTTTGTACCACCCAACTTCTTGCCTAATCAATCAAATCTTCCAGAAGCAG
ATGTGTCTTTGTCTTCAGTGACGTCTCAGGCAGCTCATCCCCAACCAGTTGGAATACTTG
GTTCATACGAGCTCAATGTTAGACAGAGAGCAGCACATGGACTGGGATTGGTACCAAGTT
CCTCTAACATATTCTACCCAGATGGTGGCCTTTATGAGAGCACTAACTTTGGTGGTGCAT
CTGTTTCTCCGTTGGGAGCTAATGATCGGAACAGACTCATTCTTGACAAGGGAAAAATAC
GAGAAAGGGATCGAAGTTCAGGTGTCTTTTCAACTGATTCGTCTAACTTCTCCAGTGACC
GTAATCGGGGACCAAGGGCTTCAAAGCCAAAGGGCCAGAGCACCTCTGGACAGGGAGTTT
CCTCTTCTTCCAGAAAAAGTGATGCATCAAATTCTGTGGTTCACTTTGATTCATACAACC
AACCAGATTTTGTTACAGATTACGAGAATGCCAAGTTCTTTATAATCAAGTCTTACAGTG
AAGATAATGTTCACAGAAGTATCAAATACAGCGTTTGGGCCAGCACAGCACTTGGAAACC
GTAAATTGGATGCTGCTTATCAAAAAGCAAAGGAGATAGAGACCAATTGTCCAATCTTCC
TGTGTTTCTCGGTCAATGCTAGTTCGCAGTTTTGTGGAGTAGCAGAAATGGTTGGACCTG
TAAATTTTGAGAAAGATGCAGAATACTGGCAGCAGGATAGGTGGAGTGGGTTGTTCCCGG
TCAAGTGGCATATTATCAAAGATGTACCTAACAGTCTATTTCGTCACATACTACTAGAAA
ATAATGAAAACAAGCCTGTTACTCACAGCCGAGACACACAAGAGGTGAATTTGGAACAGG
GTATCGAGATGTTAAAAATTTTTAAGTCTTATGATGCACATACATCCATCCTAGAAGATT
TTGATTTCTATGAACAAAGGGAGAGAGCTTCAAAGGAAAGAAAGGCCAGACAGCAAGCTT
GTTCAACAACAAAAAGTCCAGGTTCTGAGGAGTCTGTAAACCATGTTTCCAATAGCTTTT
CTCAATCCCTCCAGTTGGAAGAGAGTGATAGGGAAGTAATAGCAACTGAATGGGGTGACA
ATTCAAGGACAGAATCAGGGGCCCACTGCTTGGAAGAGAGTGGTGAAGCAGTGGAACCTG
AAAGGGGTTGTAGCACTACAACAGGTGCTCTGGTTTCACTTGCTGATGACTCCATGAACC
AAATGTCTGATAGCTTTGCTCAAACACTACGGTTGGAAGGGAGTATTAAAGAATTGAGAG
CTGCTTCTAGCTCAGGAACTGATGCTGAGGTTTCACTTGATGATGCCATAACCCTAATGA
CTTTAGAATCCAAAAAGAATAATAAAGAACTACCAAGAGCTGGAAGGATTAACAGCCCAA
GACCAGATGCTTTTGTTTTACTTGTTGATTACCCCAAGGGCCAAATATCTGATAGCTCTG
TTCAATCCCCACAGTTGGAAGAGAGTAGTAAAGAAGTGTAGACAACTAGAAGGCTTGGGT
ATCAGAATTAATCCTGTCAACCTGATGGTAACAGTTGTATTGACTGGTCAAAGTGGTGGT
GTAGCTGTAGTGGGCATCCCAGGAGTGGTTGCATGCATCTTGGACATGCTGCTGTAACCT
AACATATTCCTTGTTCTCTTTGTGACTCTAGTCTTCGTCTGCTGACTACATTTGAGGTGG
TATTTTGGACACCCAAGTGACCCGGATGTTTTCCATATAAGATGTTGGTTTTTGTGTTTT
TTTCGTTTTTTTCTCTTTCCATTTATAGTTCTGTTGATTGTTTGGAGCAGAGAGCCAGTA
ACATTCAGGCAGGGCTTTGGATGCAGATGGTGTGGAATTCAATACTCATTAGCCCGTCTT
TTCCAGAGTTGTTTCCTATGAAGGAAGGTGGTGTTGAGCATATTGAAGTAACAGGTGTGG
GGTGTTCCGCTCAAGAAGATTATGACCCTGATTCCATTCTGGTTGTAATGGTGGGATTTT
TGTTTTAATGGTTTGTATGAAGGCAGTTGGGTGTTGTAATCTGCTTCTTGATAAAAAGGA
GTTGTAAACATCCCCAATTTGGGATGATAAATTGTAAAAGAATGTTACAGATGCATCCAA
GAATTGTGTAAAATCTTTGTTTGAGGTGCATGGGAAGGCAATATGGAGTGAGATGGTTTT