Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01850.t01
CDS Infomation

cds chromosome:12X:11:19782573:19815971:-1 gene:VIT_11s0052g01850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGCGTTGAACCATTCAATAGGTTGGTGAAGCTTGCAGCTAGAGCATTTTATGACGAT
ATAACAACCAAAGGAGACAACCAGCCCAAGACTGGGAGGAGTGATAACCGGGGCATTGCT
GTAGTGGTGCTTGATGCTCTCACAAGACGACAATGGGTTAGAGAAGAAGATTTGGCAAAG
GACTTAAAGCTTCACTCAAAGCAGCTTCGTCGGACTCTACGATTTTTTGAAGAAGAAAAA
TTAGTTACCCGGGATCATAGGAGAGAGACAGCTAAGGGTGCAAAAATATATAGTGCTGCA
ATAGCTGCCACAGGTGATGGACAACAGACTAAGGAGGGAGATGAAAAGATAAAGCTGCAT
ACTCACTCTTACTGTTGCTTAGATTATGCGCAGATTTATGATGTTGTAAGATATAGATTG
CATCGTATGAAGAAAAAACTAAAAGATGAACTGGAGGACAAGAACACAGTTCAGGAGTAT
ATATGCCCCAATTGTGGCAAAAGATACAATGCTTTAGATGCACTGCGACTGATATCTATG
GAAGATGAATATTTTCATTGTGAAAGTTGCAATGGGGAACTTGTAGCGGAGAGTGACAAG
TTAGCTTCTCAAGAGATAGGTGATGGGGATGACAATGCCAGGAGGCGGCGACGTGAAAAG
TTGAAAGACATGCTTCAAAAAATGGAGGTACAGCTTAAGCCATTAATGGACCAACTCAGC
AGAGTAAAAGATTTGCCTGTTCCTGAATTTGGAAGTCTTCAAGCGTGGGAAGCACGAGCC
AATGCTGCTGGACGTGCAGCTAATGGTGATTCTAATGCTAACGATTCCTCCAAATCTTCT
CAAGGGCTAGGATTTGGTGGAACACCAATGCCTTTTGTTGGAGAGACAAAGGTCGAAGTT
GCTTTTTCTGGTGTCGGAGTTAAGGAAGAGGATAGTAAATCTGAAATTGCAAACGCCAGT
TTGAAAGTCTTGCCACCCTGGATGATCAAGGAAGGGATGAACCTTACAAAAGAGCAACGA
GGAGAGATCAAGCAAGAGTCTAAAATGGGGAGCAGTTCAGCACCTCTAGGATCTTCAGAT
GACAAAAAATCAACCACTAACAAAGATGAAGAGAAAAATTTACAGGATGAGTATGTTAAA
GCTTATTATGCTGCTATACTTAAGAGGCAACAAGAACAAGAAGAAGCTGCCAAGAAGCAA
CTGGAGCTGTCAAATGCACATATCTCCAATAGTGTTTTGGGTACATCTTCTAATCGTCAA
GTTGGCATGAAGTCCAAACGGGATGAAGATGAGGGAGATGATGACTTTGAATGGGAAGAG
GCTCCAACTGCTGGCAATAAAAGTGAAAGTTTCAAGGTTAATGACTTGAATGTTCAAGCT
GATGCTTCAGGAGATGATGAGGATGATATAGACTGGGAAGAGGGTTGA

Peptide Sequence

PEP ID

VIT_11s0052g01850.t01
PEP Infomation

pep chromosome:12X:11:19782573:19815971:-1 gene:VIT_11s0052g01850 transcript:VIT_11s0052g01850.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVEPFNRLVKLAARAFYDDITTKGDNQPKTGRSDNRGIAVVVLDALTRRQWVREEDLAK
DLKLHSKQLRRTLRFFEEEKLVTRDHRRETAKGAKIYSAAIAATGDGQQTKEGDEKIKLH
THSYCCLDYAQIYDVVRYRLHRMKKKLKDELEDKNTVQEYICPNCGKRYNALDALRLISM
EDEYFHCESCNGELVAESDKLASQEIGDGDDNARRRRREKLKDMLQKMEVQLKPLMDQLS
RVKDLPVPEFGSLQAWEARANAAGRAANGDSNANDSSKSSQGLGFGGTPMPFVGETKVEV
AFSGVGVKEEDSKSEIANASLKVLPPWMIKEGMNLTKEQRGEIKQESKMGSSSAPLGSSD
DKKSTTNKDEEKNLQDEYVKAYYAAILKRQQEQEEAAKKQLELSNAHISNSVLGTSSNRQ
VGMKSKRDEDEGDDDFEWEEAPTAGNKSESFKVNDLNVQADASGDDEDDIDWEEG

Transcript Sequence

Transcript ID

VIT_11s0052g01850.t01
Transcript Infomation

cdna chromosome:12X:11:19782573:19815971:-1 gene:VIT_11s0052g01850 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCTCTCTCTCTCCTTTGATTTTTAGTGTCCACGGGATTTTTTGGGTTTAAAGACATCATT
TGTTTTTGTCTAGTCATCTCAGCAACAAAAGCAGCTCTGAGGCTTTCCCCTCAAGCTCCG
GCGAGTTGAAGGCGCACTGGAAGCGCGCCTTAGATACGCTTGGACTCTAGAGGCATACGC
TTTTTGAAAAATCCCGATCGTGCTGTACAAATTGATGAACAAACATGAGCGTTGAACCAT
TCAATAGGTTGGTGAAGCTTGCAGCTAGAGCATTTTATGACGATATAACAACCAAAGGAG
ACAACCAGCCCAAGACTGGGAGGAGTGATAACCGGGGCATTGCTGTAGTGGTGCTTGATG
CTCTCACAAGACGACAATGGGTTAGAGAAGAAGATTTGGCAAAGGACTTAAAGCTTCACT
CAAAGCAGCTTCGTCGGACTCTACGATTTTTTGAAGAAGAAAAATTAGTTACCCGGGATC
ATAGGAGAGAGACAGCTAAGGGTGCAAAAATATATAGTGCTGCAATAGCTGCCACAGGTG
ATGGACAACAGACTAAGGAGGGAGATGAAAAGATAAAGCTGCATACTCACTCTTACTGTT
GCTTAGATTATGCGCAGATTTATGATGTTGTAAGATATAGATTGCATCGTATGAAGAAAA
AACTAAAAGATGAACTGGAGGACAAGAACACAGTTCAGGAGTATATATGCCCCAATTGTG
GCAAAAGATACAATGCTTTAGATGCACTGCGACTGATATCTATGGAAGATGAATATTTTC
ATTGTGAAAGTTGCAATGGGGAACTTGTAGCGGAGAGTGACAAGTTAGCTTCTCAAGAGA
TAGGTGATGGGGATGACAATGCCAGGAGGCGGCGACGTGAAAAGTTGAAAGACATGCTTC
AAAAAATGGAGGTACAGCTTAAGCCATTAATGGACCAACTCAGCAGAGTAAAAGATTTGC
CTGTTCCTGAATTTGGAAGTCTTCAAGCGTGGGAAGCACGAGCCAATGCTGCTGGACGTG
CAGCTAATGGTGATTCTAATGCTAACGATTCCTCCAAATCTTCTCAAGGGCTAGGATTTG
GTGGAACACCAATGCCTTTTGTTGGAGAGACAAAGGTCGAAGTTGCTTTTTCTGGTGTCG
GAGTTAAGGAAGAGGATAGTAAATCTGAAATTGCAAACGCCAGTTTGAAAGTCTTGCCAC
CCTGGATGATCAAGGAAGGGATGAACCTTACAAAAGAGCAACGAGGAGAGATCAAGCAAG
AGTCTAAAATGGGGAGCAGTTCAGCACCTCTAGGATCTTCAGATGACAAAAAATCAACCA
CTAACAAAGATGAAGAGAAAAATTTACAGGATGAGTATGTTAAAGCTTATTATGCTGCTA
TACTTAAGAGGCAACAAGAACAAGAAGAAGCTGCCAAGAAGCAACTGGAGCTGTCAAATG
CACATATCTCCAATAGTGTTTTGGGTACATCTTCTAATCGTCAAGTTGGCATGAAGTCCA
AACGGGATGAAGATGAGGGAGATGATGACTTTGAATGGGAAGAGGCTCCAACTGCTGGCA
ATAAAAGTGAAAGTTTCAAGGTTAATGACTTGAATGTTCAAGCTGATGCTTCAGGAGATG
ATGAGGATGATATAGACTGGGAAGAGGGTTGAGTGGTTTTCTCCGGACCTTCTGTCAAGT
TATGCTGGTGTATAAGTAGAAGAGCGCTCGAACCATTATAAAATGCCAATTTTTGTTTGT
TTTGTTTACGTCTTTGATGACACAGAAATAGGTTTTTTCTGCGTATAAATACATATTGGA
AACTTGAACCCAGGCCAACTAATTCCTACTCTCCAATTCTTAAGGCTTTTTTTATTTATT
TATTTTTTTTGGGGGGGGGGCTCTTTTTATCAACTACTGTAATTCTTTTGTTATTGTCAT
TATAAGAGGGAGCCCTTGGGAGTCGGCCGGCAACGACTAAAGTTGATGTCGGTGCATTAT
AGTGTTGAATACAATGTACATGGCAGGTTTTGGTCAAAGGATGATATTATTTCAGTTTAA
ATCAAC