Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01570.t01
CDS Infomation

cds chromosome:12X:11:19300828:19306424:-1 gene:VIT_11s0052g01570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTCAGTCAATCTCCTAATATGTAGCTTACAGATGATCTCACTAATGTTTGTGGGTCAT
CTGGGAGAGCTAGCTCTCTCTGGTGCTTCCATGGCCACTTCCTTTGCATCAGTCACTGGC
TTCAGCTTGCTGTTAGGAATGGGAAGCGCATTAGATACCTTCTGCGGTCAGTCATTTGGA
GCAAAACAATATCATATGCTTGGTATACATAAGCAAAGAGCCATGGTTGTGCTTCTATTG
GTTAGCATTCCTGTTGCTTTTATTTGGAGCAATACAGGCTATATTCTTGCATCATTGGGA
CAAGATCCAGAAATATCAGCTGAAGCCGGACTTTATGCTCGCTTTATGATACCTAGCATT
TTCGCTTTTGCGCTTCTACAATGTCATATTAGATTCTTACAAGCTCAAAACAATGTAGTT
CCCATGATGATAACCACAGGATTCACAACTCTACTCCATATCCTCACTTGTTGGATACTA
GTCTTCAAATCAGGGCTTCGAAACAAAGGGGCTGCACTTGCAAATGCCATATCTTGTTGG
ATGAATGTCTTGTTGTTAGCGATTTATGTCAGGATCTCCCCTTCTTGCAAGAAAACTTGG
ATGGGTTTTTCAAGGGAAGCAATGCATGATGTGCCAAAGTTTCTGAGACTAGCAATTCCT
TCGGCTGTGATGATATGCTTGGAAATCTGGTCATTTGAAATGATGGTGTTGTTATCTGGT
CTTCTTCCTAATCCAAAGCTTGAGACATCAGCTCTATCAATCAGCCTTAACATAAGTTCA
GTAATTTACATGATACCCCTTGGACTTAGTGGCGCAATAAGTGTAAGAGTTTCAAACGAA
TTAGGGGCTGGACGACCACAATCAGCACGTTTAGCAATATATGTTGTGTTATTCATGGTC
ACTATAGAAGGCGTTTTGGTAGCTACAATCCTGATCTCAGGGCATAAATTTTGGGGCTAT
TCTTACAGTAATGAAGAAAAAGTAGTGAAATATGTTGGAGAAATTATGGTGTTGGTTGCA
GTATCCCACTTTTGGGATGGTATTCAAACGGTGCTTTCAGGCATGGTTAGAGGAAGTGGC
AAGCAAAAGATTGGCGCTTTGATTAACCTAGGAGCTTATTATCTTGTTGGAATTCCATTT
GGTGCATTATTAGCTTTTGTGTATCACATTGGAGGAAAGGGGCTCTGGACAGGAATTATA
GTTTCACTGTTCATGCAGGCAGTATCCCTTGCAATCATAATTTTTTGCACTAATTGGGAG
AGAGAAGCAAAGAAGGCTACTGATAGAGTTCATCATGACTCAATAGTCCCTGTGAATGTA
GCATAA

Peptide Sequence

PEP ID

VIT_11s0052g01570.t01
PEP Infomation

pep chromosome:12X:11:19300828:19306424:-1 gene:VIT_11s0052g01570 transcript:VIT_11s0052g01570.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MSVNLLICSLQMISLMFVGHLGELALSGASMATSFASVTGFSLLLGMGSALDTFCGQSFG
AKQYHMLGIHKQRAMVVLLLVSIPVAFIWSNTGYILASLGQDPEISAEAGLYARFMIPSI
FAFALLQCHIRFLQAQNNVVPMMITTGFTTLLHILTCWILVFKSGLRNKGAALANAISCW
MNVLLLAIYVRISPSCKKTWMGFSREAMHDVPKFLRLAIPSAVMICLEIWSFEMMVLLSG
LLPNPKLETSALSISLNISSVIYMIPLGLSGAISVRVSNELGAGRPQSARLAIYVVLFMV
TIEGVLVATILISGHKFWGYSYSNEEKVVKYVGEIMVLVAVSHFWDGIQTVLSGMVRGSG
KQKIGALINLGAYYLVGIPFGALLAFVYHIGGKGLWTGIIVSLFMQAVSLAIIIFCTNWE
REAKKATDRVHHDSIVPVNVA

Transcript Sequence

Transcript ID

VIT_11s0052g01570.t01
Transcript Infomation

cdna chromosome:12X:11:19300828:19306424:-1 gene:VIT_11s0052g01570 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAAAAGAGAGGAGATCTTGGGTGAAGTGAAGAAACAGTTGAAGCTAGCAGGGCCTTTGAT
GTCAGTCAATCTCCTAATATGTAGCTTACAGATGATCTCACTAATGTTTGTGGGTCATCT
GGGAGAGCTAGCTCTCTCTGGTGCTTCCATGGCCACTTCCTTTGCATCAGTCACTGGCTT
CAGCTTGCTGTTAGGAATGGGAAGCGCATTAGATACCTTCTGCGGTCAGTCATTTGGAGC
AAAACAATATCATATGCTTGGTATACATAAGCAAAGAGCCATGGTTGTGCTTCTATTGGT
TAGCATTCCTGTTGCTTTTATTTGGAGCAATACAGGCTATATTCTTGCATCATTGGGACA
AGATCCAGAAATATCAGCTGAAGCCGGACTTTATGCTCGCTTTATGATACCTAGCATTTT
CGCTTTTGCGCTTCTACAATGTCATATTAGATTCTTACAAGCTCAAAACAATGTAGTTCC
CATGATGATAACCACAGGATTCACAACTCTACTCCATATCCTCACTTGTTGGATACTAGT
CTTCAAATCAGGGCTTCGAAACAAAGGGGCTGCACTTGCAAATGCCATATCTTGTTGGAT
GAATGTCTTGTTGTTAGCGATTTATGTCAGGATCTCCCCTTCTTGCAAGAAAACTTGGAT
GGGTTTTTCAAGGGAAGCAATGCATGATGTGCCAAAGTTTCTGAGACTAGCAATTCCTTC
GGCTGTGATGATATGCTTGGAAATCTGGTCATTTGAAATGATGGTGTTGTTATCTGGTCT
TCTTCCTAATCCAAAGCTTGAGACATCAGCTCTATCAATCAGCCTTAACATAAGTTCAGT
AATTTACATGATACCCCTTGGACTTAGTGGCGCAATAAGTGTAAGAGTTTCAAACGAATT
AGGGGCTGGACGACCACAATCAGCACGTTTAGCAATATATGTTGTGTTATTCATGGTCAC
TATAGAAGGCGTTTTGGTAGCTACAATCCTGATCTCAGGGCATAAATTTTGGGGCTATTC
TTACAGTAATGAAGAAAAAGTAGTGAAATATGTTGGAGAAATTATGGTGTTGGTTGCAGT
ATCCCACTTTTGGGATGGTATTCAAACGGTGCTTTCAGGCATGGTTAGAGGAAGTGGCAA
GCAAAAGATTGGCGCTTTGATTAACCTAGGAGCTTATTATCTTGTTGGAATTCCATTTGG
TGCATTATTAGCTTTTGTGTATCACATTGGAGGAAAGGGGCTCTGGACAGGAATTATAGT
TTCACTGTTCATGCAGGCAGTATCCCTTGCAATCATAATTTTTTGCACTAATTGGGAGAG
AGAAGCAAAGAAGGCTACTGATAGAGTTCATCATGACTCAATAGTCCCTGTGAATGTAGC
ATAATAAAGTTCACATTGAAGTAATATTGCTTATCCGATAAAAATCATGCCCAATCGTAT
ATTCCGTTTCTTTGAGATTTGTGATTTGTATTCCGCGTGGTGATAACAGGGACAAGCCCT
ATCTCCATGGATGGGGAAGACCAGAAACCAAGTCTGGAATCACCATTGATTTCTCAAGAA
GCTGTCTCTCACTCCAGGAATGGAGCAAAAAGAGAGGAGATCTTGGGTGAAGTGAAGAAA
CAGTTGAAGCTAGCAGGGCCTTTGATGTCAGTCAATGTTCTACTATATAGCTTACAGGCG
ATTTCAGTA