Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01450.t01
CDS Infomation

cds chromosome:12X:11:19167892:19168803:-1 gene:VIT_11s0052g01450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTCCTATCACATCTCATGCAAATGGTGAAAACCCATCTCCATTTGAGTTTATCAAG
GATCTTGAGGGATGTCAAAAGGGACACAAAGTTAAAGACATCCATAAGCTCAAGAAGTAC
CTTCAACAGTTTGGTTACTTGAGCTATAGCCATTCCGAATACCAAACCCATGCCGACAAT
GATGATTTTGATGATCTCTTAGAGTTTGCCATCAAAACCTACCAGACCAATTACTACCTC
AAGGCCAGTGGAAATCTAGACTCTGAAACAGTGTCCGTGATGGTGAAGCCTCGCTGTGGC
GTAGCAGATATCATCAATGGCACGAGCAGAATGAGGTCGGGAAGCAGAAGCTATCCGCAT
GGCTATGGATCTCTCCATACAGTAGCTCATTATTCCTTCTTCGCAGGATCCCCAAGATGG
CCACCTTCCAATACCCATCTCACCTATGCATTTCTTTCCGGCACCTCAAGTACGACCATG
AGCGCTGTGACGAGAGCTTTTGGCCAGTGGGCTTCTGCAACGGACTTCACCTTTGCAGAG
ACTCAAGACTACACGAATGCTGACATGAAAATTGGTTTTCAGAGGGGTGATCATGGAGAT
GGATTCCCGTTTGATGGCCCCGGTGGAACCATAGCTCATTCTTTTTCCCCAACTGATGGA
AGGCTTCATTTTGATGGGGATGAATCATGGGTAGTAGGTGCTGTTGCTGGTGCATTTGAC
GTGGAGACTGTTGCCTTGCATGAGATAGGTCATCTTCTTGGACTTGGTCATAGTTCAGTT
GAAGGCGCTATCATTTTTCCCACCATTGCCTTTGGAGTGACTAAGGGTTTGAATGAGGAT
GACATTCAAGGAATTCAGGCTCTGTACAACTTTAGGACTAGAACTGGCTCTTGCTCTTAT
GAAATTATGTAG

Peptide Sequence

PEP ID

VIT_11s0052g01450.t01
PEP Infomation

pep chromosome:12X:11:19167892:19168803:-1 gene:VIT_11s0052g01450 transcript:VIT_11s0052g01450.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFPITSHANGENPSPFEFIKDLEGCQKGHKVKDIHKLKKYLQQFGYLSYSHSEYQTHADN
DDFDDLLEFAIKTYQTNYYLKASGNLDSETVSVMVKPRCGVADIINGTSRMRSGSRSYPH
GYGSLHTVAHYSFFAGSPRWPPSNTHLTYAFLSGTSSTTMSAVTRAFGQWASATDFTFAE
TQDYTNADMKIGFQRGDHGDGFPFDGPGGTIAHSFSPTDGRLHFDGDESWVVGAVAGAFD
VETVALHEIGHLLGLGHSSVEGAIIFPTIAFGVTKGLNEDDIQGIQALYNFRTRTGSCSY
EIM

Transcript Sequence

Transcript ID

VIT_11s0052g01450.t01
Transcript Infomation

cdna chromosome:12X:11:19167892:19168803:-1 gene:VIT_11s0052g01450 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTTCCTATCACATCTCATGCAAATGGTGAAAACCCATCTCCATTTGAGTTTATCAAG
GATCTTGAGGGATGTCAAAAGGGACACAAAGTTAAAGACATCCATAAGCTCAAGAAGTAC
CTTCAACAGTTTGGTTACTTGAGCTATAGCCATTCCGAATACCAAACCCATGCCGACAAT
GATGATTTTGATGATCTCTTAGAGTTTGCCATCAAAACCTACCAGACCAATTACTACCTC
AAGGCCAGTGGAAATCTAGACTCTGAAACAGTGTCCGTGATGGTGAAGCCTCGCTGTGGC
GTAGCAGATATCATCAATGGCACGAGCAGAATGAGGTCGGGAAGCAGAAGCTATCCGCAT
GGCTATGGATCTCTCCATACAGTAGCTCATTATTCCTTCTTCGCAGGATCCCCAAGATGG
CCACCTTCCAATACCCATCTCACCTATGCATTTCTTTCCGGCACCTCAAGTACGACCATG
AGCGCTGTGACGAGAGCTTTTGGCCAGTGGGCTTCTGCAACGGACTTCACCTTTGCAGAG
ACTCAAGACTACACGAATGCTGACATGAAAATTGGTTTTCAGAGGGGTGATCATGGAGAT
GGATTCCCGTTTGATGGCCCCGGTGGAACCATAGCTCATTCTTTTTCCCCAACTGATGGA
AGGCTTCATTTTGATGGGGATGAATCATGGGTAGTAGGTGCTGTTGCTGGTGCATTTGAC
GTGGAGACTGTTGCCTTGCATGAGATAGGTCATCTTCTTGGACTTGGTCATAGTTCAGTT
GAAGGCGCTATCATTTTTCCCACCATTGCCTTTGGAGTGACTAAGGGTTTGAATGAGGAT
GACATTCAAGGAATTCAGGCTCTGTACAACTTTAGGACTAGAACTGGCTCTTGCTCTTAT
GAAATTATGTAG