Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01320.t01
CDS Infomation

cds chromosome:12X:11:19011166:19012250:1 gene:VIT_11s0052g01320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXD6]
Sequence

ATGGCTTCTACTTCTACTTCAAATCTTTCACCAAAGTTGCTCTTGCTCTCTCTTCTGCTT
GGTTCCTTTGTGGTTGCTTCTGTTGGTAACTTGTACCAAGATTTTGATCTCACTTGGGGT
GATGGCAGAGCCAAGATCCTCAACAATGGACAGCTTCTTACTCTCTCCCTTGACAAAGCC
TCTGGCTCTGGCTTCCAGTCCAAGAATGAGTATCTGTTTGGGAAGATTGATATGCAGCTG
AAGCTTGTGCCTGGAAACTCTGCTGGCACTGTCACTGCCTACTATCTATCTTCACAAGGG
CCTACCCATGATGAGATAGATTTTGAATTCTTGGGGAATCTCAGTGGTGATCCATACATT
CTTCACACTAATGTGTTCAGCCAAGGGAAGGGAAACAGAGAACAGCAGTTCTACCTCTGG
TTTGACCCCACTGCTGATTTCCACACCTATTCCATCCTCTGGAATCCCCAGCGGATTATC
TTCTCTGTGGATGGCACCCCCATCAGAGAGTTCAAGAACTCAGAGTCCATTGGTGTTCCA
TTCCCAAAGAACCAGCCCATGAGGATATACTCGAGTCTCTGGAATGCTGATGACTGGGCA
ACAAGAGGTGGTCTTGTGAAGACAGACTGGACCCAAGCACCCTTCACTGCCTCCTACAGG
AACTTCAATGCCAATGCTTGTGTGTGGTCCTCTCGATCATCTTCTTGCAGTTCCACCTCT
CCATCTTCTACCTCCACCAATGGGGGATGGTACTCACAGGAGCTAGATTCCACAAGCCAA
GAGAGAATGAAATGGGTGCAGAAGAATTACATGATCTACAATTACTGCACAGACACAAAG
AGATTCCCACAGGGCCTTCCCCCTGAATGCACTGCCACCACCACATCCTAA

Peptide Sequence

PEP ID

VIT_11s0052g01320.t01
PEP Infomation

pep chromosome:12X:11:19011166:19012250:1 gene:VIT_11s0052g01320 transcript:VIT_11s0052g01320.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXD6]
Sequence

MASTSTSNLSPKLLLLSLLLGSFVVASVGNLYQDFDLTWGDGRAKILNNGQLLTLSLDKA
SGSGFQSKNEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
LHTNVFSQGKGNREQQFYLWFDPTADFHTYSILWNPQRIIFSVDGTPIREFKNSESIGVP
FPKNQPMRIYSSLWNADDWATRGGLVKTDWTQAPFTASYRNFNANACVWSSRSSSCSSTS
PSSTSTNGGWYSQELDSTSQERMKWVQKNYMIYNYCTDTKRFPQGLPPECTATTTS

Transcript Sequence

Transcript ID

VIT_11s0052g01320.t01
Transcript Infomation

cdna chromosome:12X:11:19011166:19012250:1 gene:VIT_11s0052g01320 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXD6]
Sequence

ATGGCTTCTACTTCTACTTCAAATCTTTCACCAAAGTTGCTCTTGCTCTCTCTTCTGCTT
GGTTCCTTTGTGGTTGCTTCTGTTGGTAACTTGTACCAAGATTTTGATCTCACTTGGGGT
GATGGCAGAGCCAAGATCCTCAACAATGGACAGCTTCTTACTCTCTCCCTTGACAAAGCC
TCTGGCTCTGGCTTCCAGTCCAAGAATGAGTATCTGTTTGGGAAGATTGATATGCAGCTG
AAGCTTGTGCCTGGAAACTCTGCTGGCACTGTCACTGCCTACTATCTATCTTCACAAGGG
CCTACCCATGATGAGATAGATTTTGAATTCTTGGGGAATCTCAGTGGTGATCCATACATT
CTTCACACTAATGTGTTCAGCCAAGGGAAGGGAAACAGAGAACAGCAGTTCTACCTCTGG
TTTGACCCCACTGCTGATTTCCACACCTATTCCATCCTCTGGAATCCCCAGCGGATTATC
TTCTCTGTGGATGGCACCCCCATCAGAGAGTTCAAGAACTCAGAGTCCATTGGTGTTCCA
TTCCCAAAGAACCAGCCCATGAGGATATACTCGAGTCTCTGGAATGCTGATGACTGGGCA
ACAAGAGGTGGTCTTGTGAAGACAGACTGGACCCAAGCACCCTTCACTGCCTCCTACAGG
AACTTCAATGCCAATGCTTGTGTGTGGTCCTCTCGATCATCTTCTTGCAGTTCCACCTCT
CCATCTTCTACCTCCACCAATGGGGGATGGTACTCACAGGAGCTAGATTCCACAAGCCAA
GAGAGAATGAAATGGGTGCAGAAGAATTACATGATCTACAATTACTGCACAGACACAAAG
AGATTCCCACAGGGCCTTCCCCCTGAATGCACTGCCACCACCACATCCTAA