Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01260.t01
CDS Infomation

cds chromosome:12X:11:18989158:18990290:1 gene:VIT_11s0052g01260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXE2]
Sequence

ATGGCTTCTCCTTCTACTTCAAATCTTTCACCAAAGTTGCTCTTGCTCTCTCTTCTGTTT
GGTTCCTTTGTGGTTGCTTCTGTTGGTAACTTGTACCAAGATTTGGATATCACTTGGGGT
GATGGCAGAGCCAAGATCCTCGACAATGGACAGCTTCTTACTCTCTCCCTTGACAAAGCC
TCTGGCTCTGGCTTCCAGTCCCAGGATGAATATCTGTTTGGGAAGATTGATATGCAGCTG
AAGCTTGTGCCTGGTAACTCTGCTGGCACAGTCACTGCCTACTATCTATCTTCACAAGGG
CCTACCCATGATGAGATAGATTTTGAATTCTTGGGGAATCTCAGTGGGGATCCATACATT
CTTCACACTAATGTGTTCAGCCAAGGCAAGGGAAACAGAGAGCAGCAGTTCTACCTCTGG
TTCGACCCTACTGCCGATTTCCACACATATTCTGTTCTCTGGAATCCTCAGCGCATTATC
TTCTCTGTGGATGGCACCCCCATCAGAGAGTTCAAGAACTCAGAGTCCATAGGTGTTCCA
TACCCCAAGAACCAGCCCATGAGGATATACTCCAGTCTCTGGAATGCTGATGACTGGGCA
ACAAGAGGTGGGCTGGTGAAGACAGACTGGAGCCTAGCCCCCTTCACAGCCTCCTACAGG
AACTTCAATGCCAATGCATGTGTTTGGTCCTCTGGATCATCTTCTTGCAGTTCAAACTCT
CCATCTTCTACCTCCACCAATGGTGGATGGTACTCACAGGAGCTTGATTCCACAAGCCAA
GAGAGAATGAAATGGGTGCAGAAGAACTACATGATCTACAATTACTGCACAGACACAAAG
CGATTCCCACAAGGCCTTCCTCTTGAATGCACTGCCACTACCACGTCCTAG

Peptide Sequence

PEP ID

VIT_11s0052g01260.t01
PEP Infomation

pep chromosome:12X:11:18989158:18990290:1 gene:VIT_11s0052g01260 transcript:VIT_11s0052g01260.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXE2]
Sequence

MASPSTSNLSPKLLLLSLLFGSFVVASVGNLYQDLDITWGDGRAKILDNGQLLTLSLDKA
SGSGFQSQDEYLFGKIDMQLKLVPGNSAGTVTAYYLSSQGPTHDEIDFEFLGNLSGDPYI
LHTNVFSQGKGNREQQFYLWFDPTADFHTYSVLWNPQRIIFSVDGTPIREFKNSESIGVP
YPKNQPMRIYSSLWNADDWATRGGLVKTDWSLAPFTASYRNFNANACVWSSGSSSCSSNS
PSSTSTNGGWYSQELDSTSQERMKWVQKNYMIYNYCTDTKRFPQGLPLECTATTTS

Transcript Sequence

Transcript ID

VIT_11s0052g01260.t01
Transcript Infomation

cdna chromosome:12X:11:18989158:18990290:1 gene:VIT_11s0052g01260 gene_biotype:protein_coding transcript_biotype:protein_coding description:Xyloglucan endotransglucosylase/hydrolase [Source:UniProtKB/TrEMBL;Acc:F6GXE2]
Sequence

TTCCATACTCGAGCTGTTTTTCATTTCTCATCTCTATATTCGCATTCAATGGCTTCTCCT
TCTACTTCAAATCTTTCACCAAAGTTGCTCTTGCTCTCTCTTCTGTTTGGTTCCTTTGTG
GTTGCTTCTGTTGGTAACTTGTACCAAGATTTGGATATCACTTGGGGTGATGGCAGAGCC
AAGATCCTCGACAATGGACAGCTTCTTACTCTCTCCCTTGACAAAGCCTCTGGCTCTGGC
TTCCAGTCCCAGGATGAATATCTGTTTGGGAAGATTGATATGCAGCTGAAGCTTGTGCCT
GGTAACTCTGCTGGCACAGTCACTGCCTACTATCTATCTTCACAAGGGCCTACCCATGAT
GAGATAGATTTTGAATTCTTGGGGAATCTCAGTGGGGATCCATACATTCTTCACACTAAT
GTGTTCAGCCAAGGCAAGGGAAACAGAGAGCAGCAGTTCTACCTCTGGTTCGACCCTACT
GCCGATTTCCACACATATTCTGTTCTCTGGAATCCTCAGCGCATTATCTTCTCTGTGGAT
GGCACCCCCATCAGAGAGTTCAAGAACTCAGAGTCCATAGGTGTTCCATACCCCAAGAAC
CAGCCCATGAGGATATACTCCAGTCTCTGGAATGCTGATGACTGGGCAACAAGAGGTGGG
CTGGTGAAGACAGACTGGAGCCTAGCCCCCTTCACAGCCTCCTACAGGAACTTCAATGCC
AATGCATGTGTTTGGTCCTCTGGATCATCTTCTTGCAGTTCAAACTCTCCATCTTCTACC
TCCACCAATGGTGGATGGTACTCACAGGAGCTTGATTCCACAAGCCAAGAGAGAATGAAA
TGGGTGCAGAAGAACTACATGATCTACAATTACTGCACAGACACAAAGCGATTCCCACAA
GGCCTTCCTCTTGAATGCACTGCCACTACCACGTCCTAG