Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01240.t01
CDS Infomation

cds chromosome:12X:11:18968097:18972989:1 gene:VIT_11s0052g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTTGTAGTGTTCTCAAAGGGAATTTCTCCCCCATGCTTCATTCTCAAGATGGG
TTTTCTCTTTCGAGGTTGTCAACTTCTCTCCATTGCAAGAAGTGGAAGCTGAATGTTGTA
GCAAGTGCCGAAGACCATAATGCAGATGAAGACAAGACTAATCCTGGAGCCATGAGTAGT
GGTCAGCAAAAGCAAGAGAAACTGAAAGTCAAAAGGGCCCTCAATTTCTCTGGAGAAAAG
CCTTCTACTTCCATCTTAGATACCATCAACCACCCAAAGCATATGAAGAATCTCTCCATT
GAGGAACTGGAGATGTTGGCTGATGAACTCCGGGAAGAGCTGGTTTATGTAGTCTCAAAG
ACTGGTGGGCATCTCAGTGCAAGCCTAGGAGTGGCTGAGCTCACAGTTGCCCTTCATCAT
GTCTTCAACACCCCAGATGATAAGATCATTTGGGATGTTGGACATCAGGCATATCCGCAT
AAGATATTGACTGCCAGGAGATCAAGAATGCATACCATTCGACAGACTAGTGGGCTTGCT
GGCTTCCCCAAGAGGGACGAGAGTGTGCATGATGCCTTTGGAGCTGGCCATAGCTCTACC
AGCATTTCAGCTGGCTTAGGGATGGCAGTTGCTAGAGACTTGTTAAGGAAGAACAACCAT
GTGATTGCGGTGATCGGGGATGGAGCCATGACAGCAGGACAGGCATATGAGGCAATGAAC
AATGCAGGTTATCTCGATTCAAACCTTATCATCATCCTCAATGACAACAATCAAGTCTCT
CTGCCCACTGCCACCGCTGACGGCCCTGCTCCTCCCGTTGGAGCTCTAAGCAAAGCCCTA
AAGAGGCTTCAGTCCAGTAGAAAATTTCAGCAGCTCCATCAAACCGCAAAGGCCATCACC
GAGCGAGTTGGAGGCCAGGCCCATGAAATTGCTGCCAAAGTAGACTTGTACCTGAGAGGG
ATGATCAATGGGTTAGGAGCCTGCTTCTTTGAAGAGCTTGGATTGCACTATATTGGTCCA
GTGGATGGCCATAATATGGAAGAACTTGTCCATATATTGAAGGTGGTTAAGGCCATTCCT
GGGCAGGGAGCTGTTCTAATCCATATTGTTACTGAGAAAGGAAAAGGATATGCTCCTGCT
GAAGCTGCCCCTGATAAGATGCATGGCGTCGTTAAATTCGATCCCCATTCAGGAAAACAG
TTGAAGTCGAAATCGAGCACACTCTCATACACCCAATACTTTGCAGAGTCTTTGATTGCA
GAAGCAGAAAGAGATGACAAGATTGTAGCAATCCATGCTGCAATGGGGGGAGGCACTGGA
CTTAATCTATTCCAGAAACGCTTCCCCAATAGATGCTTTGATGTTGGGATTGCAGAGCAA
CATGCTGTCACCTTTGCTGCTGGTCTAGCTACTGAAGGCCTCAAGCCTTTTTGTGCTATT
TATTCTTCTTTTCTGCAAAGAGCTTTTGATCAGGTAGTTCATGATGTGGATCTTCAAAAG
CTTCCAGTGAGATTTGCAATGGACAGGGCTGGCCTTGTTGGTGCGGATGGTCCGACCCAT
TGCGGGGCCTTTGACACTACTTTCATGGCTTGTTTACCTAACATGGTGGTCATGGCCCCT
TCGTGTGAACGCGAGCTCATGAACATGGTGGCCACAGCTGCAGCCATTGACGACAGACCC
AGTTGCTTTAGGTACCCTAGAGGAAACGGCATTGGTTCTATTATCCCTCCCTTCAACAAA
GGGACACCTTTAGAGGTTGGTAAGGGAAGGGTGCTGGAGGAGGGAACCAGGGTGGCTATA
CTGGGCTATGGCACAATTGTACAAAGCTGTGTGGCAGCATCACATCTACTTCAAAGGTTC
GGCATATCAGCAACAGTGGTCGATGCACGATTCTGCAAGCCTCTTGATGGAGATTTGATC
AGGCAGCTGGCTCGAGAGCATGAGGTCCTCCTCACTGTTGAAGAAGGATCCATTGGAGGT
TTTGGCTCTCACGTCTCCCATTTCTTGGCCTTGAATGGATTGCTGGATGGAACTCTTAAG
TGGAGGGCTATGATGCTACCCGATAGATACATCGATCATGGATCACAGAGGGAGCAGATT
GAGGAGGCTGGGCTGACCTCGAAGCACATTGCGGCCACAGTTTTAGCTTTAATAGGTGAA
AACAAGGATGCCCTTCACCAACTCAAATTAAAATAG

Peptide Sequence

PEP ID

VIT_11s0052g01240.t01
PEP Infomation

pep chromosome:12X:11:18968097:18972989:1 gene:VIT_11s0052g01240 transcript:VIT_11s0052g01240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASCSVLKGNFSPMLHSQDGFSLSRLSTSLHCKKWKLNVVASAEDHNADEDKTNPGAMSS
GQQKQEKLKVKRALNFSGEKPSTSILDTINHPKHMKNLSIEELEMLADELREELVYVVSK
TGGHLSASLGVAELTVALHHVFNTPDDKIIWDVGHQAYPHKILTARRSRMHTIRQTSGLA
GFPKRDESVHDAFGAGHSSTSISAGLGMAVARDLLRKNNHVIAVIGDGAMTAGQAYEAMN
NAGYLDSNLIIILNDNNQVSLPTATADGPAPPVGALSKALKRLQSSRKFQQLHQTAKAIT
ERVGGQAHEIAAKVDLYLRGMINGLGACFFEELGLHYIGPVDGHNMEELVHILKVVKAIP
GQGAVLIHIVTEKGKGYAPAEAAPDKMHGVVKFDPHSGKQLKSKSSTLSYTQYFAESLIA
EAERDDKIVAIHAAMGGGTGLNLFQKRFPNRCFDVGIAEQHAVTFAAGLATEGLKPFCAI
YSSFLQRAFDQVVHDVDLQKLPVRFAMDRAGLVGADGPTHCGAFDTTFMACLPNMVVMAP
SCERELMNMVATAAAIDDRPSCFRYPRGNGIGSIIPPFNKGTPLEVGKGRVLEEGTRVAI
LGYGTIVQSCVAASHLLQRFGISATVVDARFCKPLDGDLIRQLAREHEVLLTVEEGSIGG
FGSHVSHFLALNGLLDGTLKWRAMMLPDRYIDHGSQREQIEEAGLTSKHIAATVLALIGE
NKDALHQLKLK

Transcript Sequence

Transcript ID

VIT_11s0052g01240.t01
Transcript Infomation

cdna chromosome:12X:11:18968097:18972989:1 gene:VIT_11s0052g01240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTTGTAGTGTTCTCAAAGGGAATTTCTCCCCCATGCTTCATTCTCAAGATGGG
TTTTCTCTTTCGAGGTTGTCAACTTCTCTCCATTGCAAGAAGTGGAAGCTGAATGTTGTA
GCAAGTGCCGAAGACCATAATGCAGATGAAGACAAGACTAATCCTGGAGCCATGAGTAGT
GGTCAGCAAAAGCAAGAGAAACTGAAAGTCAAAAGGGCCCTCAATTTCTCTGGAGAAAAG
CCTTCTACTTCCATCTTAGATACCATCAACCACCCAAAGCATATGAAGAATCTCTCCATT
GAGGAACTGGAGATGTTGGCTGATGAACTCCGGGAAGAGCTGGTTTATGTAGTCTCAAAG
ACTGGTGGGCATCTCAGTGCAAGCCTAGGAGTGGCTGAGCTCACAGTTGCCCTTCATCAT
GTCTTCAACACCCCAGATGATAAGATCATTTGGGATGTTGGACATCAGGCATATCCGCAT
AAGATATTGACTGCCAGGAGATCAAGAATGCATACCATTCGACAGACTAGTGGGCTTGCT
GGCTTCCCCAAGAGGGACGAGAGTGTGCATGATGCCTTTGGAGCTGGCCATAGCTCTACC
AGCATTTCAGCTGGCTTAGGGATGGCAGTTGCTAGAGACTTGTTAAGGAAGAACAACCAT
GTGATTGCGGTGATCGGGGATGGAGCCATGACAGCAGGACAGGCATATGAGGCAATGAAC
AATGCAGGTTATCTCGATTCAAACCTTATCATCATCCTCAATGACAACAATCAAGTCTCT
CTGCCCACTGCCACCGCTGACGGCCCTGCTCCTCCCGTTGGAGCTCTAAGCAAAGCCCTA
AAGAGGCTTCAGTCCAGTAGAAAATTTCAGCAGCTCCATCAAACCGCAAAGGCCATCACC
GAGCGAGTTGGAGGCCAGGCCCATGAAATTGCTGCCAAAGTAGACTTGTACCTGAGAGGG
ATGATCAATGGGTTAGGAGCCTGCTTCTTTGAAGAGCTTGGATTGCACTATATTGGTCCA
GTGGATGGCCATAATATGGAAGAACTTGTCCATATATTGAAGGTGGTTAAGGCCATTCCT
GGGCAGGGAGCTGTTCTAATCCATATTGTTACTGAGAAAGGAAAAGGATATGCTCCTGCT
GAAGCTGCCCCTGATAAGATGCATGGCGTCGTTAAATTCGATCCCCATTCAGGAAAACAG
TTGAAGTCGAAATCGAGCACACTCTCATACACCCAATACTTTGCAGAGTCTTTGATTGCA
GAAGCAGAAAGAGATGACAAGATTGTAGCAATCCATGCTGCAATGGGGGGAGGCACTGGA
CTTAATCTATTCCAGAAACGCTTCCCCAATAGATGCTTTGATGTTGGGATTGCAGAGCAA
CATGCTGTCACCTTTGCTGCTGGTCTAGCTACTGAAGGCCTCAAGCCTTTTTGTGCTATT
TATTCTTCTTTTCTGCAAAGAGCTTTTGATCAGGTAGTTCATGATGTGGATCTTCAAAAG
CTTCCAGTGAGATTTGCAATGGACAGGGCTGGCCTTGTTGGTGCGGATGGTCCGACCCAT
TGCGGGGCCTTTGACACTACTTTCATGGCTTGTTTACCTAACATGGTGGTCATGGCCCCT
TCGTGTGAACGCGAGCTCATGAACATGGTGGCCACAGCTGCAGCCATTGACGACAGACCC
AGTTGCTTTAGGTACCCTAGAGGAAACGGCATTGGTTCTATTATCCCTCCCTTCAACAAA
GGGACACCTTTAGAGGTTGGTAAGGGAAGGGTGCTGGAGGAGGGAACCAGGGTGGCTATA
CTGGGCTATGGCACAATTGTACAAAGCTGTGTGGCAGCATCACATCTACTTCAAAGGTTC
GGCATATCAGCAACAGTGGTCGATGCACGATTCTGCAAGCCTCTTGATGGAGATTTGATC
AGGCAGCTGGCTCGAGAGCATGAGGTCCTCCTCACTGTTGAAGAAGGATCCATTGGAGGT
TTTGGCTCTCACGTCTCCCATTTCTTGGCCTTGAATGGATTGCTGGATGGAACTCTTAAG
TGGAGGGCTATGATGCTACCCGATAGATACATCGATCATGGATCACAGAGGGAGCAGATT
GAGGAGGCTGGGCTGACCTCGAAGCACATTGCGGCCACAGTTTTAGCTTTAATAGGTGAA
AACAAGGATGCCCTTCACCAACTCAAATTAAAATAG