Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01130.t01
CDS Infomation

cds chromosome:12X:11:18874225:18902406:-1 gene:VIT_11s0052g01130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGAGAAGCCAGCGCGCTCTATGAAACGCCCACTCTCAGCAGATGATGTCCTCAAC
AAGCCCCCAATGCAGAAGAGAGTGAAATTTCCGAAGGGTAAAAAGGTGAAACCAGGAGAT
GAAGTTTTAAATGCAGGAAAAGATGAAGATGTCCCAAGTGAGTTGAAAGATCCACGTCTC
GCTGCGAAAGAACGTGCAAAACATCGGACTCAGATTACTGCTGAACTCTTCAGTGAAGAA
AGTAGGGGGATTTTTCATGACATCTCAGCTGCAGAAATGAACTATGAGGGTGATGAGAAC
TTTGATGATGATGGGATTCAAATAGAACCTTTTAATCTGAATCAAGAGAGGGAAGAAGGC
TACTTTGATTCAGAGGGAAATTTTGTGGAATATGTAAACGAGAAAGAAATTAAGGATGCA
TGGCTTGATAGTGTTGATCTTGAACCAAAATTTGACAAAAGAAATATGGTGACAAAAGTT
GAAGATGACACCCAAGACCTTACAACAGCAGCTATTGGAAAAATAAAGAGACGTATTGCC
GACCTGCTTGAGCCAGGAGAAACGGTTTTACAAGCTTTGAGAAGATTGAAAGGAACTTCA
AATAACAGGAAGGAGAAGATGTCAGCAGAAACAAAGCTTCTTTTTGACCAGTTAACTGAA
GATGCTATGAAGCTGTTGGAGAATGGTGAATTCAATGTATACCATGAAAAGCAGGAGGTT
TTTGAGCGTGAGGCAGAAGGTTATGAGAGGTTAGCTCAAGCAAAGGGAGAGGGCACATCC
ATGGGTGCAGTTCAAGGAGCATCTGGTTCTGTTATGGAACGGGACTTGTTCTCTGTAACA
TATCTTGGAGCAGCTGCTTCCATACTGCCTGAGACAGCTGCAGGTTCTTCAAACCTGAAT
GGATCTACTACTGAAATTTCAAACAATGATAATGATGCATTTGATATGTTTGGAGAAGAT
GATGAACCTGCTCCTGCTAATTTATCCTCTGATGGTGGTAATTTAGCTACTGTTCCTAAT
TCTGATATGATCGATCAACCACTTTCAGAAGTCCAAGGCACAAGTTCTGAAACTGGAGCT
TTGCAAAATGATTATGTCTATGACGAGTCTTCTGGGTACTACTATAGCAGCAGTTTGGGC
TACTATTATGACCCATCTTCAGGACTGTATTGCTCTGCAGCATCTGGCCAATGGTACTCA
TTCAACGAGGAGACAGGCACATATGATGAAATTCATGAGGTTGCATCCAACACAAGTTAA

Peptide Sequence

PEP ID

VIT_11s0052g01130.t01
PEP Infomation

pep chromosome:12X:11:18874225:18902406:-1 gene:VIT_11s0052g01130 transcript:VIT_11s0052g01130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEEKPARSMKRPLSADDVLNKPPMQKRVKFPKGKKVKPGDEVLNAGKDEDVPSELKDPRL
AAKERAKHRTQITAELFSEESRGIFHDISAAEMNYEGDENFDDDGIQIEPFNLNQEREEG
YFDSEGNFVEYVNEKEIKDAWLDSVDLEPKFDKRNMVTKVEDDTQDLTTAAIGKIKRRIA
DLLEPGETVLQALRRLKGTSNNRKEKMSAETKLLFDQLTEDAMKLLENGEFNVYHEKQEV
FEREAEGYERLAQAKGEGTSMGAVQGASGSVMERDLFSVTYLGAAASILPETAAGSSNLN
GSTTEISNNDNDAFDMFGEDDEPAPANLSSDGGNLATVPNSDMIDQPLSEVQGTSSETGA
LQNDYVYDESSGYYYSSSLGYYYDPSSGLYCSAASGQWYSFNEETGTYDEIHEVASNTS

Transcript Sequence

Transcript ID

VIT_11s0052g01130.t01
Transcript Infomation

cdna chromosome:12X:11:18874225:18902406:-1 gene:VIT_11s0052g01130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGACTTTCCCCGGAAAGGGGTTCCTCGAGCCTCTTCCTCCTCTCCGACTTCAGCTACTCA
TTACGTTCGGTTTGTTTCGCGAGAAAATGTGTAAAATATAAAAGATATGGAAGCTTTCAT
GCCTGTTCGTTCATTGTAACCCCAGTAAAGAATATACTCCACCCAGGATTGGTTGGTTGC
TCTTATGGAGGAGAAGCCAGCGCGCTCTATGAAACGCCCACTCTCAGCAGATGATGTCCT
CAACAAGCCCCCAATGCAGAAGAGAGTGAAATTTCCGAAGGGTAAAAAGGTGAAACCAGG
AGATGAAGTTTTAAATGCAGGAAAAGATGAAGATGTCCCAAGTGAGTTGAAAGATCCACG
TCTCGCTGCGAAAGAACGTGCAAAACATCGGACTCAGATTACTGCTGAACTCTTCAGTGA
AGAAAGTAGGGGGATTTTTCATGACATCTCAGCTGCAGAAATGAACTATGAGGGTGATGA
GAACTTTGATGATGATGGGATTCAAATAGAACCTTTTAATCTGAATCAAGAGAGGGAAGA
AGGCTACTTTGATTCAGAGGGAAATTTTGTGGAATATGTAAACGAGAAAGAAATTAAGGA
TGCATGGCTTGATAGTGTTGATCTTGAACCAAAATTTGACAAAAGAAATATGGTGACAAA
AGTTGAAGATGACACCCAAGACCTTACAACAGCAGCTATTGGAAAAATAAAGAGACGTAT
TGCCGACCTGCTTGAGCCAGGAGAAACGGTTTTACAAGCTTTGAGAAGATTGAAAGGAAC
TTCAAATAACAGGAAGGAGAAGATGTCAGCAGAAACAAAGCTTCTTTTTGACCAGTTAAC
TGAAGATGCTATGAAGCTGTTGGAGAATGGTGAATTCAATGTATACCATGAAAAGCAGGA
GGTTTTTGAGCGTGAGGCAGAAGGTTATGAGAGGTTAGCTCAAGCAAAGGGAGAGGGCAC
ATCCATGGGTGCAGTTCAAGGAGCATCTGGTTCTGTTATGGAACGGGACTTGTTCTCTGT
AACATATCTTGGAGCAGCTGCTTCCATACTGCCTGAGACAGCTGCAGGTTCTTCAAACCT
GAATGGATCTACTACTGAAATTTCAAACAATGATAATGATGCATTTGATATGTTTGGAGA
AGATGATGAACCTGCTCCTGCTAATTTATCCTCTGATGGTGGTAATTTAGCTACTGTTCC
TAATTCTGATATGATCGATCAACCACTTTCAGAAGTCCAAGGCACAAGTTCTGAAACTGG
AGCTTTGCAAAATGATTATGTCTATGACGAGTCTTCTGGGTACTACTATAGCAGCAGTTT
GGGCTACTATTATGACCCATCTTCAGGACTGTATTGCTCTGCAGCATCTGGCCAATGGTA
CTCATTCAACGAGGAGACAGGCACATATGATGAAATTCATGAGGTTGCATCCAACACAAG
TTAAAGCTGAGACAGTTTTTTGAGGTAGCAATTGAGGAGGTTTGTACAGAGCAGATATCT
GTAGTGTGAAAAAGGGATAGTGGAAGGTTTATACGTACATGGTGAGTACGTTTTCTTTAG
TTGAAAGCTTGACCTTTTACTGGGTTTCTTACTCCAGATCTCCTGAACTTTCTCTGTACC
ATGTTTCAACTCAATATGTTGCTGGTTGATTACTTGAGAGACAAAGAAATCATGTTCCCT
ATCAGTTTTGGGCGACTGTGGAGGCAACTGTCCTTTGTGAAATATATCATGTCTTAGGCA
ATTCAATCTGCACTTTCTATTATTATTTTTCTGAAGGTTCCATGTTAT