Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g01110.t01
CDS Infomation

cds chromosome:12X:11:18842882:18848139:-1 gene:VIT_11s0052g01110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGCCACACAGGAGTTCATTTACCGATCGAAACTTCCCGACATCAACATCCCGAGT
CATCTCCCATTACATTCGTATTGCTTCCAGCACATATCCAAATTCAGCTCCAATCCATGC
CTCATCAACGCCGGCAATGGCAACATCTACACTTACGCTGATGTCCATCTCACCGCACGT
AAAGTGGCTGCCGGCCTTAACAGGCTAGGCATCCGACAAGGTGATGCTATCATGCTTTTA
CTCCAAAACTGCCCGGAATTTGTCTTCTCATTTCTCGGCGCCTCTTATCTCGGTGCAACT
AGCACGACGGCGAACCCCTTTTACACGCCGGCCGAGATTGAGAAGCAAGCCACTGCATCA
AGCGCTAGAATTATAATCACTCAAGCTTGTTTTGCCGAGAAAGTGAAGAAATTCGCTGAA
GAAAACGATGTGAAAATCATCTGCATTGACGAGCCGGTGGCGGGTTGTTTGCATTTTTCG
GAGTTGTCACAGGCCGACGAGAATGACATCCCGGATGTTAACATCAGCCCCGACGATGTT
GTCGCGCTGCCTTATTCATCCGGGACGGTGGGGCTTCCAAAAGGGGTGATGCTAACTCAC
AAAAGCATGATCACCAGTGTCGCTCAGCAGGTCGATGGCGAAAACCCTAATCTGTATTTC
CACCTGGACGATGTGATTTTATGCGTGTTACCCATGTTTCACATATATTCCCTGAGCTCA
GTTGTGCTTTGTGGCCTTAGAGTTGGGGCTGCAATTCTGATTATGCAGAAGTTTGAGATA
AACACACTCATGGAACTTGTTCAGAAACATAAGGTGACTATTGCACCATTTGTTCCTCCA
ATTCTCTTGGCTATCGCAAAGAGCCCGGTCGCTCACCAGTATGATCTTTCGTCGATTCGG
ACTGTGATCTCCGGTGCCGCTCCGATGGGGAAGGAGCTTGAAGACAGCCTTGGGTCAAAG
CTGCCCAATGCCGTAATTGGACAGGGGTATGGGATGACTGAAGCTGGACCTGTACTATCG
ATGTGCTTAGCATTTGCAAAGGAACCATTTGAGATAAAATCAGGGGCTTGTGGGACTGTG
GTTAGAAATGCAGAGATGAAGATCATCAACCCTGAGACTGGTGCTTCTCTTCCTCCAAAT
CAAGCAGGAGAGATTTGCATAAGAGGTGACCAAATCATGAAAGGTTATCTTAATGATATT
GAGGCCACTAAAGAAGCCATAGACGAAGAAAAATGGCTACACACAGGTGATATCGGATAC
ATAGATGATAATGATGAGCTCTTCATTGTCGATCGATTGAAGGAGATAATTAAAAATAGA
GGATTTCAAGTGGCTCCAGCTGAACTTGAAGCAATCTTGATTGCTCATCCTAATATTGTT
GATGCTGCGGTTGTACCGATGAAAGATGAAGCTGCGGGAGAGGTTCCAATTGCATTCATT
GTGAGATCAAATGGTTTTGAAATCACCGAGGATGAAATAAAGGAATACATCGCAAAACAA
GTTGTATATTATAAGAGAATTAAAAGGGTTTTCTTCATTGAGACAATTCCTAAGGCTCCA
TCTGGTAAAATCCTCAGAAAAGACCTCAAAGCAAAGCTGGCCGCTGGCTTTTCCAATTAA

Peptide Sequence

PEP ID

VIT_11s0052g01110.t01
PEP Infomation

pep chromosome:12X:11:18842882:18848139:-1 gene:VIT_11s0052g01110 transcript:VIT_11s0052g01110.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEATQEFIYRSKLPDINIPSHLPLHSYCFQHISKFSSNPCLINAGNGNIYTYADVHLTAR
KVAAGLNRLGIRQGDAIMLLLQNCPEFVFSFLGASYLGATSTTANPFYTPAEIEKQATAS
SARIIITQACFAEKVKKFAEENDVKIICIDEPVAGCLHFSELSQADENDIPDVNISPDDV
VALPYSSGTVGLPKGVMLTHKSMITSVAQQVDGENPNLYFHLDDVILCVLPMFHIYSLSS
VVLCGLRVGAAILIMQKFEINTLMELVQKHKVTIAPFVPPILLAIAKSPVAHQYDLSSIR
TVISGAAPMGKELEDSLGSKLPNAVIGQGYGMTEAGPVLSMCLAFAKEPFEIKSGACGTV
VRNAEMKIINPETGASLPPNQAGEICIRGDQIMKGYLNDIEATKEAIDEEKWLHTGDIGY
IDDNDELFIVDRLKEIIKNRGFQVAPAELEAILIAHPNIVDAAVVPMKDEAAGEVPIAFI
VRSNGFEITEDEIKEYIAKQVVYYKRIKRVFFIETIPKAPSGKILRKDLKAKLAAGFSN

Transcript Sequence

Transcript ID

VIT_11s0052g01110.t01
Transcript Infomation

cdna chromosome:12X:11:18842882:18848139:-1 gene:VIT_11s0052g01110 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAATTCAAACCCCATGGAGGCCACACAGGAGTTCATTTACCGATCGAAACTTCCCGACAT
CAACATCCCGAGTCATCTCCCATTACATTCGTATTGCTTCCAGCACATATCCAAATTCAG
CTCCAATCCATGCCTCATCAACGCCGGCAATGGCAACATCTACACTTACGCTGATGTCCA
TCTCACCGCACGTAAAGTGGCTGCCGGCCTTAACAGGCTAGGCATCCGACAAGGTGATGC
TATCATGCTTTTACTCCAAAACTGCCCGGAATTTGTCTTCTCATTTCTCGGCGCCTCTTA
TCTCGGTGCAACTAGCACGACGGCGAACCCCTTTTACACGCCGGCCGAGATTGAGAAGCA
AGCCACTGCATCAAGCGCTAGAATTATAATCACTCAAGCTTGTTTTGCCGAGAAAGTGAA
GAAATTCGCTGAAGAAAACGATGTGAAAATCATCTGCATTGACGAGCCGGTGGCGGGTTG
TTTGCATTTTTCGGAGTTGTCACAGGCCGACGAGAATGACATCCCGGATGTTAACATCAG
CCCCGACGATGTTGTCGCGCTGCCTTATTCATCCGGGACGGTGGGGCTTCCAAAAGGGGT
GATGCTAACTCACAAAAGCATGATCACCAGTGTCGCTCAGCAGGTCGATGGCGAAAACCC
TAATCTGTATTTCCACCTGGACGATGTGATTTTATGCGTGTTACCCATGTTTCACATATA
TTCCCTGAGCTCAGTTGTGCTTTGTGGCCTTAGAGTTGGGGCTGCAATTCTGATTATGCA
GAAGTTTGAGATAAACACACTCATGGAACTTGTTCAGAAACATAAGGTGACTATTGCACC
ATTTGTTCCTCCAATTCTCTTGGCTATCGCAAAGAGCCCGGTCGCTCACCAGTATGATCT
TTCGTCGATTCGGACTGTGATCTCCGGTGCCGCTCCGATGGGGAAGGAGCTTGAAGACAG
CCTTGGGTCAAAGCTGCCCAATGCCGTAATTGGACAGGGGTATGGGATGACTGAAGCTGG
ACCTGTACTATCGATGTGCTTAGCATTTGCAAAGGAACCATTTGAGATAAAATCAGGGGC
TTGTGGGACTGTGGTTAGAAATGCAGAGATGAAGATCATCAACCCTGAGACTGGTGCTTC
TCTTCCTCCAAATCAAGCAGGAGAGATTTGCATAAGAGGTGACCAAATCATGAAAGGTTA
TCTTAATGATATTGAGGCCACTAAAGAAGCCATAGACGAAGAAAAATGGCTACACACAGG
TGATATCGGATACATAGATGATAATGATGAGCTCTTCATTGTCGATCGATTGAAGGAGAT
AATTAAAAATAGAGGATTTCAAGTGGCTCCAGCTGAACTTGAAGCAATCTTGATTGCTCA
TCCTAATATTGTTGATGCTGCGGTTGTACCGATGAAAGATGAAGCTGCGGGAGAGGTTCC
AATTGCATTCATTGTGAGATCAAATGGTTTTGAAATCACCGAGGATGAAATAAAGGAATA
CATCGCAAAACAAGTTGTATATTATAAGAGAATTAAAAGGGTTTTCTTCATTGAGACAAT
TCCTAAGGCTCCATCTGGTAAAATCCTCAGAAAAGACCTCAAAGCAAAGCTGGCCGCTGG
CTTTTCCAATTAATC