Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00970.t01
CDS Infomation

cds chromosome:12X:11:18601367:18603333:-1 gene:VIT_11s0052g00970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGAGTTTTGGTCGTCTCTTGCGTCCCTTCTGGGGGTGCTGGCCTTCTGCCAGAGC
ATCCTCCACGCCGTGTTCCCGCCGGAGCTCCGGTTTGCAGTGCTGAAGCTCTTCAAACGC
CTCTTCAACTGCTCCTCCTACTGCTACTTCGATATCACTGAAATCGATGGCGTCAACACC
AACGAGCTCTACAACGCTGTCCAGCTCTACCTGAGCTCCTCCGCCTCCATCACCGGCAGC
AGGCTGAGCCTCACCCGGGCCTTGAATTCCTCGTCCACCACCTTCGGCCTCTCCAACAAC
GACTCCCTGGTGGACACCTTCAACGGGGTCTCCGTCCTCTGGGAGCACGTCGTGACGCAG
CGGCAGTCACAGACCTTCTCGTGGCGGCCGCTGCCGGAGGAGAAGCGGGGGTTCACTCTG
CGAATCAAGAAGGGGGACAAGCACCTCATCCTCAACTCCTACCTCGACTACATCACTGAG
AAGGCCAACGATATCAGGAGAAAAAACCAGGAGAGGTTCCTGTACACCAACTCCCGCGGC
GGATCTCTGGATTCCAGGGGCCACCCGTGGGAGTCGGTGCCGTTCAAGCATCCGAGCACG
TTCGACACCTTGGCTATGGATCCCACCACAAAAAAGGAGATCATGGACGATCTCAGAGAC
TTTTCAAACGGCCAGACATTCTACCAGAAGACCGGCCGCGCCTGGAAGAGAGGTTACCTC
CTGTACGGACCTCCCGGCACCGGGAAATCCAGTATGATCGCCGCCATGGCCAATTTTCTC
GGCTACGACGTGTACGATTTGGAATTGACGGAGGTGCACACCAATTCCGAGCTGCGGAAG
CTCCTGATGAAAACCAGTTCCAAATCGATAATCGTGATCGAGGACATCGACTGCTCCATC
AACCTCGGCAACAGGAAGAAGAGCAATTCGGGCGGGAGGCAGGGCTACGACGGCACCCCC
CATGAAATGCGCGGTGGAGGCGGCGCCGGCGCCGGCGAGGATGGTGTGAACTCGATCACG
CTCTCCGGCCTCCTGAACTTCACTGACGGGCTGTGGTCGTGCTGCGGGAGCGAGAGGATT
TTCGTGTTCACCACCAACCACATTGAGAAGCTCGACCCTGCATTGCTCCGGAGCGGCCGG
ATGGACATGCACATATTCATGAGCTACTGCACCTTCCCGGCATTGAAGATTCTGCTCCAG
AATTACCTGGGGTTCAGCGAACCCGACATGGGGTTGCAGATAATGGAGGAGATAGAAGCG
GTAATAGACAAAGCCCAGATGACTCCGGCGGATATCAGTGAAGTGCTGATAAAGAACCGG
CGGCACAAAGACAAGGCCTTGAGCGAGCTGCTGGAGGCATTGAGGAACATGGCGGAGAGG
AGGAAGAAGGAGAATTGGAGGAGTGCAAGGGAGAAGAACTCAACAGAAGTGGAAGAGGAA
GAGCAGGAGAAGAGGGCTCTAGAGAATCCCAAACAAGGGTGTGATGAGGAGTTTGAGGAA
AGCTGCAAGAAAGAAGAAGAAGATGATGAAGAGAAGCTAAACTGA

Peptide Sequence

PEP ID

VIT_11s0052g00970.t01
PEP Infomation

pep chromosome:12X:11:18601367:18603333:-1 gene:VIT_11s0052g00970 transcript:VIT_11s0052g00970.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKEFWSSLASLLGVLAFCQSILHAVFPPELRFAVLKLFKRLFNCSSYCYFDITEIDGVNT
NELYNAVQLYLSSSASITGSRLSLTRALNSSSTTFGLSNNDSLVDTFNGVSVLWEHVVTQ
RQSQTFSWRPLPEEKRGFTLRIKKGDKHLILNSYLDYITEKANDIRRKNQERFLYTNSRG
GSLDSRGHPWESVPFKHPSTFDTLAMDPTTKKEIMDDLRDFSNGQTFYQKTGRAWKRGYL
LYGPPGTGKSSMIAAMANFLGYDVYDLELTEVHTNSELRKLLMKTSSKSIIVIEDIDCSI
NLGNRKKSNSGGRQGYDGTPHEMRGGGGAGAGEDGVNSITLSGLLNFTDGLWSCCGSERI
FVFTTNHIEKLDPALLRSGRMDMHIFMSYCTFPALKILLQNYLGFSEPDMGLQIMEEIEA
VIDKAQMTPADISEVLIKNRRHKDKALSELLEALRNMAERRKKENWRSAREKNSTEVEEE
EQEKRALENPKQGCDEEFEESCKKEEEDDEEKLN

Transcript Sequence

Transcript ID

VIT_11s0052g00970.t01
Transcript Infomation

cdna chromosome:12X:11:18601367:18603333:-1 gene:VIT_11s0052g00970 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCCCACTTCCCACAAGCTCTCCCTATTTCTCTCCCATTGCTTTCTCTATTTTTTCTATC
AAACAATCCAAGCCCATCTCCCTTGGATTGAAAGAGATGTGCTTGTTTCTTCATCTTTGG
TGTTAATCTTTTTGCTTTTGTTGTAACTTTTTGTTTTTGAGGAAGGGAGAGAATGAAGGA
GTTTTGGTCGTCTCTTGCGTCCCTTCTGGGGGTGCTGGCCTTCTGCCAGAGCATCCTCCA
CGCCGTGTTCCCGCCGGAGCTCCGGTTTGCAGTGCTGAAGCTCTTCAAACGCCTCTTCAA
CTGCTCCTCCTACTGCTACTTCGATATCACTGAAATCGATGGCGTCAACACCAACGAGCT
CTACAACGCTGTCCAGCTCTACCTGAGCTCCTCCGCCTCCATCACCGGCAGCAGGCTGAG
CCTCACCCGGGCCTTGAATTCCTCGTCCACCACCTTCGGCCTCTCCAACAACGACTCCCT
GGTGGACACCTTCAACGGGGTCTCCGTCCTCTGGGAGCACGTCGTGACGCAGCGGCAGTC
ACAGACCTTCTCGTGGCGGCCGCTGCCGGAGGAGAAGCGGGGGTTCACTCTGCGAATCAA
GAAGGGGGACAAGCACCTCATCCTCAACTCCTACCTCGACTACATCACTGAGAAGGCCAA
CGATATCAGGAGAAAAAACCAGGAGAGGTTCCTGTACACCAACTCCCGCGGCGGATCTCT
GGATTCCAGGGGCCACCCGTGGGAGTCGGTGCCGTTCAAGCATCCGAGCACGTTCGACAC
CTTGGCTATGGATCCCACCACAAAAAAGGAGATCATGGACGATCTCAGAGACTTTTCAAA
CGGCCAGACATTCTACCAGAAGACCGGCCGCGCCTGGAAGAGAGGTTACCTCCTGTACGG
ACCTCCCGGCACCGGGAAATCCAGTATGATCGCCGCCATGGCCAATTTTCTCGGCTACGA
CGTGTACGATTTGGAATTGACGGAGGTGCACACCAATTCCGAGCTGCGGAAGCTCCTGAT
GAAAACCAGTTCCAAATCGATAATCGTGATCGAGGACATCGACTGCTCCATCAACCTCGG
CAACAGGAAGAAGAGCAATTCGGGCGGGAGGCAGGGCTACGACGGCACCCCCCATGAAAT
GCGCGGTGGAGGCGGCGCCGGCGCCGGCGAGGATGGTGTGAACTCGATCACGCTCTCCGG
CCTCCTGAACTTCACTGACGGGCTGTGGTCGTGCTGCGGGAGCGAGAGGATTTTCGTGTT
CACCACCAACCACATTGAGAAGCTCGACCCTGCATTGCTCCGGAGCGGCCGGATGGACAT
GCACATATTCATGAGCTACTGCACCTTCCCGGCATTGAAGATTCTGCTCCAGAATTACCT
GGGGTTCAGCGAACCCGACATGGGGTTGCAGATAATGGAGGAGATAGAAGCGGTAATAGA
CAAAGCCCAGATGACTCCGGCGGATATCAGTGAAGTGCTGATAAAGAACCGGCGGCACAA
AGACAAGGCCTTGAGCGAGCTGCTGGAGGCATTGAGGAACATGGCGGAGAGGAGGAAGAA
GGAGAATTGGAGGAGTGCAAGGGAGAAGAACTCAACAGAAGTGGAAGAGGAAGAGCAGGA
GAAGAGGGCTCTAGAGAATCCCAAACAAGGGTGTGATGAGGAGTTTGAGGAAAGCTGCAA
GAAAGAAGAAGAAGATGATGAAGAGAAGCTAAACTGATAATCTGATAATATCCATATCGA
TTGGTACTTAATTTTTTTTTCCTTTCTTTTTTTGGGTTTATGGGTCTTTGGTTTAATTTA
TTTTTGGTGCAGAGAGAGAGAGAGAGAGACAGAGATGAGAGATGAGAGAACACAGACAGA
CATACTGCTGTTTGGAGTACCAAATCCCAAAGCTTTGCTGGTGAAAAAAATGAACCTTTT
TTTTTAAAGCGATACACTTTTCTCATTTCATTTATTATGTGAGGGTA