Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00940.t01
CDS Infomation

cds chromosome:12X:11:18570410:18571470:1 gene:VIT_11s0052g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTCCACAAAACCTCCTTCAAAACCCGCTCGCTCTCACCACCCAGAAGTGCACTCTC
GGCTGCCCCATCCTCGATCGCTGCCTCGCCGGTGGCGTTCCCTGCAACTCCATCACCGAG
CTAGTCGCAGAGAGCGGCTCCGGCAAGACCCAGCTCTGTCTCCAGCTCGTTCTTTCCGCC
CAGCTCCCCACCTCCCTCGGCGGCCTCGCCGCCTCCTCCCTCTACATCCACTCCGAGTTC
CCATTCCCCTCTCGCCGCCTTCAACAGCTCTCTCAATCTTTTCGCTCTTCCTACTCCCAC
GTTCTGGATTCCGAGTATAATCCGCTTGATTTCGTGTTAGTGCGCGGAGTTCAGTCTGCG
GACCAATTGTTTGATGTTTTGCTCAAGATGGATTCGGTTCTTTTGCGTCCGCCGACCCAG
TTGCCTGTTAGGCTGATTGTGATTGATTCTATTGCGGCTCTGTTCAGGGGTGAATTTGAG
AACACCCCTTTTGATCTAAAGCGGAGGTCGTCACTGTTTTTCAAGATTTCGGGGAAGTTG
AAGGCTCTGGCTGAGAGGTTTGGGTTGGCGGTGGTGGTGACGAATCAGGTGGTTGATTTT
GTGGGGCAAGCTGGGGGCTTGAATGGGCTCAGGGTTGGGAATTTGGGGAGTTTGTGGTCA
TCTGGGAGGAGGGTTTGTGCGGCTTTAGGGCTGTCTTGGGCCAATTGTGTGAACTCGAGG
TTGTTCTTGTCGAGGAATGAGGAGATTGTGGGAGAAGTGACTGGTTTGGGGGGTGTGGGA
GCTGGGGATACGGTTAGTAGGCTAACTAGGCGGCACCTTCATGTTATTTTTGCACCTCAT
TTGCCCGAATCGTCTTGTGAGTTTGTGATCTCAAGAGAAGGGGTTCTCGGAGTTGAGAGA
TAG

Peptide Sequence

PEP ID

VIT_11s0052g00940.t01
PEP Infomation

pep chromosome:12X:11:18570410:18571470:1 gene:VIT_11s0052g00940 transcript:VIT_11s0052g00940.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MIPQNLLQNPLALTTQKCTLGCPILDRCLAGGVPCNSITELVAESGSGKTQLCLQLVLSA
QLPTSLGGLAASSLYIHSEFPFPSRRLQQLSQSFRSSYSHVLDSEYNPLDFVLVRGVQSA
DQLFDVLLKMDSVLLRPPTQLPVRLIVIDSIAALFRGEFENTPFDLKRRSSLFFKISGKL
KALAERFGLAVVVTNQVVDFVGQAGGLNGLRVGNLGSLWSSGRRVCAALGLSWANCVNSR
LFLSRNEEIVGEVTGLGGVGAGDTVSRLTRRHLHVIFAPHLPESSCEFVISREGVLGVER

Transcript Sequence

Transcript ID

VIT_11s0052g00940.t01
Transcript Infomation

cdna chromosome:12X:11:18570410:18571470:1 gene:VIT_11s0052g00940 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGATTCCACAAAACCTCCTTCAAAACCCGCTCGCTCTCACCACCCAGAAGTGCACTCTC
GGCTGCCCCATCCTCGATCGCTGCCTCGCCGGTGGCGTTCCCTGCAACTCCATCACCGAG
CTAGTCGCAGAGAGCGGCTCCGGCAAGACCCAGCTCTGTCTCCAGCTCGTTCTTTCCGCC
CAGCTCCCCACCTCCCTCGGCGGCCTCGCCGCCTCCTCCCTCTACATCCACTCCGAGTTC
CCATTCCCCTCTCGCCGCCTTCAACAGCTCTCTCAATCTTTTCGCTCTTCCTACTCCCAC
GTTCTGGATTCCGAGTATAATCCGCTTGATTTCGTGTTAGTGCGCGGAGTTCAGTCTGCG
GACCAATTGTTTGATGTTTTGCTCAAGATGGATTCGGTTCTTTTGCGTCCGCCGACCCAG
TTGCCTGTTAGGCTGATTGTGATTGATTCTATTGCGGCTCTGTTCAGGGGTGAATTTGAG
AACACCCCTTTTGATCTAAAGCGGAGGTCGTCACTGTTTTTCAAGATTTCGGGGAAGTTG
AAGGCTCTGGCTGAGAGGTTTGGGTTGGCGGTGGTGGTGACGAATCAGGTGGTTGATTTT
GTGGGGCAAGCTGGGGGCTTGAATGGGCTCAGGGTTGGGAATTTGGGGAGTTTGTGGTCA
TCTGGGAGGAGGGTTTGTGCGGCTTTAGGGCTGTCTTGGGCCAATTGTGTGAACTCGAGG
TTGTTCTTGTCGAGGAATGAGGAGATTGTGGGAGAAGTGACTGGTTTGGGGGGTGTGGGA
GCTGGGGATACGGTTAGTAGGCTAACTAGGCGGCACCTTCATGTTATTTTTGCACCTCAT
TTGCCCGAATCGTCTTGTGAGTTTGTGATCTCAAGAGAAGGGGTTCTCGGAGTTGAGAGA
TAGTGATCACTTTTTGAAAGGGATGGCATCAGAAGAGACAAAAGACGTGGACTCGTTTTT
TTAACTTCATTTCAATTATTTAAATGGGGTTCTGGAGGAGAAGAATATTGGGAATTGTAT
GTTTTTTTTTCCCTTTTCAACACAGCCTTCCTCCATTTTGG