Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00890.t01
CDS Infomation

cds chromosome:12X:11:18496266:18519550:1 gene:VIT_11s0052g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCCGCCACTGACACAGATTTCGATCTCAGATCTTCGTCTCAGTCCGCTTTCGGAATC
GGGGAGTGCGCCTTCGCGGATGCGGGAAACTTGGAGCATTGTGCCAAGTATTTGAACCAG
ACGCTCGTGACGTTCGGATTCCCGGCCTCGCTCGATCTGTTCGCCGGCGATCCGGTTTCG
ATTGCGCGGACCTGTAATTGCATTTACTCTCTGCTGCAGCAGAGGCAGCGTGATGTTGAA
TTTAGGGAGTCTGCTAATGAGCAGAGACAGCGACTTCTATCTGACATATCGAGATTGGAG
GCCAAAGTTGAGAGGCTTGAGTCACAGTTACAAGCAAAAGATAGGGAGATTGCAACCATG
ACCCGGACGGAAGCAAAAGCTACAGCAGCTTTTAAGGCTCAAATAGAAAAATTGCAGCAG
GAGCGGGATGAATTTCAAAGGATGGTTATTGGTAATCAGCAAGTGAGGACTCAACAAATT
CATGAGATGAAGAAAAAAGAGAAGGAATACATAAAATTGCAGGAGAGGCTTAACCAAGTT
TTGATGGAGAAAAAGAAGGAATCGAGGTCTGGCATGGAGATAATGAATCTTCTTCAGAAA
GAAGGGCGACAACGTGGGACATGGAATGGAAAGAAGACTGACAATGATTTCTATAAAAAA
ATTGTGGATGCCTATGAGGCAAAAAATCAAGAGCTGATGGCAGAAAATACTGATTTGAGG
GCATTATTACGGTCAATGCAGGTAGATATGCGTGATTTCTTGAATGCTCCAAATGGGTTG
TCCAAGCAATCTTTGGTTGTCAATGAAAGATTTGATACAGATGCCTCACAGTCCCCATTG
GGTGGGAGGACGGATGTCTTTGATTTGCCGTTCCACATGGCTAGAGATCAAATAGAAGAA
AGTCTCAGAAATAAGATGACCTCTATAAAGGAGCGCATGGTTCAATTACAAGATGCACAG
AAAGGGGCAGAGGTTACTTCTGAAGCAACTGAGAGGGAGCTTGAGCTTGAAGCTCAACTT
GTTGAGGCACGGAGCATAATCCAGGAGCAGGCGTCGATAATGTCTAAACATCTTGCTAAG
TCTGAGAGGCCAAGGGAGTCTATCATATCATCACCAGCTGAGACATTTGTTGTTATTCAG
GGCGTATGA

Peptide Sequence

PEP ID

VIT_11s0052g00890.t01
PEP Infomation

pep chromosome:12X:11:18496266:18519550:1 gene:VIT_11s0052g00890 transcript:VIT_11s0052g00890.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPATDTDFDLRSSSQSAFGIGECAFADAGNLEHCAKYLNQTLVTFGFPASLDLFAGDPVS
IARTCNCIYSLLQQRQRDVEFRESANEQRQRLLSDISRLEAKVERLESQLQAKDREIATM
TRTEAKATAAFKAQIEKLQQERDEFQRMVIGNQQVRTQQIHEMKKKEKEYIKLQERLNQV
LMEKKKESRSGMEIMNLLQKEGRQRGTWNGKKTDNDFYKKIVDAYEAKNQELMAENTDLR
ALLRSMQVDMRDFLNAPNGLSKQSLVVNERFDTDASQSPLGGRTDVFDLPFHMARDQIEE
SLRNKMTSIKERMVQLQDAQKGAEVTSEATERELELEAQLVEARSIIQEQASIMSKHLAK
SERPRESIISSPAETFVVIQGV

Transcript Sequence

Transcript ID

VIT_11s0052g00890.t01
Transcript Infomation

cdna chromosome:12X:11:18496266:18519550:1 gene:VIT_11s0052g00890 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTCCGAGGTGAAAGGAGGAAGCCACTGTCGAGCAAAAAGCCAAAAAGGACCCCCTTCTTT
AATACCTTTTAACATCTTCAAACTTCAAATTTTGTTTTAAACTTCCCCACCGTTTCCAGA
TCTATCATCACCTAATATCTACTCAATATCTCCTCCTCCTCCTGTTCTTCGTCTTCTTTC
TCATCCGCCACTGTCGCCACACCGAAGCTCTCTCCAAGAACAATGCCCGCCACTGACACA
GATTTCGATCTCAGATCTTCGTCTCAGTCCGCTTTCGGAATCGGGGAGTGCGCCTTCGCG
GATGCGGGAAACTTGGAGCATTGTGCCAAGTATTTGAACCAGACGCTCGTGACGTTCGGA
TTCCCGGCCTCGCTCGATCTGTTCGCCGGCGATCCGGTTTCGATTGCGCGGACCTGTAAT
TGCATTTACTCTCTGCTGCAGCAGAGGCAGCGTGATGTTGAATTTAGGGAGTCTGCTAAT
GAGCAGAGACAGCGACTTCTATCTGACATATCGAGATTGGAGGCCAAAGTTGAGAGGCTT
GAGTCACAGTTACAAGCAAAAGATAGGGAGATTGCAACCATGACCCGGACGGAAGCAAAA
GCTACAGCAGCTTTTAAGGCTCAAATAGAAAAATTGCAGCAGGAGCGGGATGAATTTCAA
AGGATGGTTATTGGTAATCAGCAAGTGAGGACTCAACAAATTCATGAGATGAAGAAAAAA
GAGAAGGAATACATAAAATTGCAGGAGAGGCTTAACCAAGTTTTGATGGAGAAAAAGAAG
GAATCGAGGTCTGGCATGGAGATAATGAATCTTCTTCAGAAAGAAGGGCGACAACGTGGG
ACATGGAATGGAAAGAAGACTGACAATGATTTCTATAAAAAAATTGTGGATGCCTATGAG
GCAAAAAATCAAGAGCTGATGGCAGAAAATACTGATTTGAGGGCATTATTACGGTCAATG
CAGGTAGATATGCGTGATTTCTTGAATGCTCCAAATGGGTTGTCCAAGCAATCTTTGGTT
GTCAATGAAAGATTTGATACAGATGCCTCACAGTCCCCATTGGGTGGGAGGACGGATGTC
TTTGATTTGCCGTTCCACATGGCTAGAGATCAAATAGAAGAAAGTCTCAGAAATAAGATG
ACCTCTATAAAGGAGCGCATGGTTCAATTACAAGATGCACAGAAAGGGGCAGAGGTTACT
TCTGAAGCAACTGAGAGGGAGCTTGAGCTTGAAGCTCAACTTGTTGAGGCACGGAGCATA
ATCCAGGAGCAGGCGTCGATAATGTCTAAACATCTTGCTAAGTCTGAGAGGCCAAGGGAG
TCTATCATATCATCACCAGCTGAGACATTTGTTGTTATTCAGGGCGTATGA