Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00870.t01
CDS Infomation

cds chromosome:12X:11:18451732:18452628:-1 gene:VIT_11s0052g00870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7SQA8]
Sequence

ATGAACACCTTTCGCTTCCAACATCAAACCCAGGACTCCTTCGATTCAAGAAGATGGTCT
CAAAACCACCGTCCCTCTTCCGCCGGCTTCTACGCCAGGCGGGCCGCAGCGCCTCCGCAG
CCCTCTTCTTCTTCCATCCAAACCTTCCCAGGCCTCGCGGACGATGACCTCGTCGCCGCC
GTGGTGCCGCCGGTTACCGTCGTGCTCGAGGGCCGCTCGATCTGCCACCGCATCAGCCTC
CACAGCCACGCCAGCTACCAGAGCCTCGCCAGGGCTCTCCGCCAGATGTTCGTCGACGGC
AGCAGCGCCGACGTCGGCGCTGCTGGAGGCGACCACGAGCTCGATCTGTCCAACGCTGTT
CCCGGCCACCTCATTGCCTACGAGGACATGGAAAACGATCTTCTCCTCGCCGGCGACCTT
AATTGGAAAGATTTTGTGCGCGTTGCCAAAAGAATTCGGATTTTGCCGGCGAAGAGGAAT
TCAAGGAAGGGAAGAGGAGGGGTATAG

Peptide Sequence

PEP ID

VIT_11s0052g00870.t01
PEP Infomation

pep chromosome:12X:11:18451732:18452628:-1 gene:VIT_11s0052g00870 transcript:VIT_11s0052g00870.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7SQA8]
Sequence

MNTFRFQHQTQDSFDSRRWSQNHRPSSAGFYARRAAAPPQPSSSSIQTFPGLADDDLVAA
VVPPVTVVLEGRSICHRISLHSHASYQSLARALRQMFVDGSSADVGAAGGDHELDLSNAV
PGHLIAYEDMENDLLLAGDLNWKDFVRVAKRIRILPAKRNSRKGRGGV

Transcript Sequence

Transcript ID

VIT_11s0052g00870.t01
Transcript Infomation

cdna chromosome:12X:11:18451732:18452628:-1 gene:VIT_11s0052g00870 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7SQA8]
Sequence

CAATGAACACCTTTCGCTTCCAACATCAAACCCAGGACTCCTTCGATTCAAGAAGATGGT
CTCAAAACCACCGTCCCTCTTCCGCCGGCTTCTACGCCAGGCGGGCCGCAGCGCCTCCGC
AGCCCTCTTCTTCTTCCATCCAAACCTTCCCAGGCCTCGCGGACGATGACCTCGTCGCCG
CCGTGGTGCCGCCGGTTACCGTCGTGCTCGAGGGCCGCTCGATCTGCCACCGCATCAGCC
TCCACAGCCACGCCAGCTACCAGAGCCTCGCCAGGGCTCTCCGCCAGATGTTCGTCGACG
GCAGCAGCGCCGACGTCGGCGCTGCTGGAGGCGACCACGAGCTCGATCTGTCCAACGCTG
TTCCCGGCCACCTCATTGCCTACGAGGACATGGAAAACGATCTTCTCCTCGCCGGCGACC
TTAATTGGAAAGATTTTGTGCGCGTTGCCAAAAGAATTCGGATTTTGCCGGCGAAGAGGA
ATTCAAGGAAGGGAAGAGGAGGGGTATAGGCAGCTGCCTGAGCTAGGAAGGTGATGGTGG
TGGTGGAAGAAGAGGAAGTTATAAACTTACAACGAATCTAAATCAAGAAAAGTGGGCATT
TATTTGTGTAAAGTTTTTGGTTGTATCACTATTCCTTGTACGATGAAGAAAGATGAAACA
TTTCTTGGCTTCTGTTTTTTATTATTTCTATCTAATCATCCTCTACTAGTGTTGATGTAA
GATGATTTTTTGTGAAGACAATATGAAGATCAAGATTATTGCAAAAGTTGAGGTGATGAA
TAG