Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00860.t01
CDS Infomation

cds chromosome:12X:11:18435079:18444982:1 gene:VIT_11s0052g00860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCACCCAAAACTTCAATCTCTCATGTCATCTTCGACATGGACGGCCTCTTGCTCGAC
ACAGAGAAGTTTTATACTGAGGTCCAGGAAATTATACTTGCTAGGTATAATAAAACTTTT
GATTGGTCCCTCAAGGCAAAGATGATGGGAAAGAAGGCAATAGAAGCTGCTCGGGTCTTT
GTTGAAGAGACTGGAATTAGTGACTCTCTTTCAGCTGAGGACTTTCTTGTGGAAAGAGAG
GAGATGCTACGGAAATTGTTTCCAACAAGTGAGCTCATGCCAGGGGCCAGCCGTTTGGTG
AAACATCTTCATGCAAGTGGAATACCGATTTGTGTGGCAACAGGTTCTCACAGACGGCAT
TTTGAATTGAAAACACAAAGACATGGTGAAGTTTTTTCATTGATGCATCATGTAGTTCTT
GGTGATGATCCAGAAGTTAAACAGGGAAAACCATCTCCAGATATATTCCTTGCAGCTGCC
AGAAGATTTGAGGGTGGTCCGGTAGATTCACAAAAAATTCTTGTGTTTGAAGACGCACCT
TCTGGAGTTGGTGCTGCTAAGAATGCTGGGATGTATGCAGTTATGGTTCCAGATCCAAGG
CTTGATATCTCTTTTCACGAAGCTGCAGACCAAGTTCTGAGCTCCCTACTGGATTTCAAT
CCAAATGATTGGGGTTTGCCTCCATTCCCAGACACCACAATCTAA

Peptide Sequence

PEP ID

VIT_11s0052g00860.t01
PEP Infomation

pep chromosome:12X:11:18435079:18444982:1 gene:VIT_11s0052g00860 transcript:VIT_11s0052g00860.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAPKTSISHVIFDMDGLLLDTEKFYTEVQEIILARYNKTFDWSLKAKMMGKKAIEAARVF
VEETGISDSLSAEDFLVEREEMLRKLFPTSELMPGASRLVKHLHASGIPICVATGSHRRH
FELKTQRHGEVFSLMHHVVLGDDPEVKQGKPSPDIFLAAARRFEGGPVDSQKILVFEDAP
SGVGAAKNAGMYAVMVPDPRLDISFHEAADQVLSSLLDFNPNDWGLPPFPDTTI

Transcript Sequence

Transcript ID

VIT_11s0052g00860.t01
Transcript Infomation

cdna chromosome:12X:11:18435079:18444982:1 gene:VIT_11s0052g00860 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGAGGAAATCGTGGATGCTTGGGATCAGAATCCCAATTGGAGTTTGGAGAAACGCTACA
CCTTTTCGTCCTCCAACCCTCAGATTCCGGGCGATCGCTTTCTCCATGGCACCCAAAACT
TCAATCTCTCATGTCATCTTCGACATGGACGGCCTCTTGCTCGACACAGAGAAGTTTTAT
ACTGAGGTCCAGGAAATTATACTTGCTAGGTATAATAAAACTTTTGATTGGTCCCTCAAG
GCAAAGATGATGGGAAAGAAGGCAATAGAAGCTGCTCGGGTCTTTGTTGAAGAGACTGGA
ATTAGTGACTCTCTTTCAGCTGAGGACTTTCTTGTGGAAAGAGAGGAGATGCTACGGAAA
TTGTTTCCAACAAGTGAGCTCATGCCAGGGGCCAGCCGTTTGGTGAAACATCTTCATGCA
AGTGGAATACCGATTTGTGTGGCAACAGGTTCTCACAGACGGCATTTTGAATTGAAAACA
CAAAGACATGGTGAAGTTTTTTCATTGATGCATCATGTAGTTCTTGGTGATGATCCAGAA
GTTAAACAGGGAAAACCATCTCCAGATATATTCCTTGCAGCTGCCAGAAGATTTGAGGGT
GGTCCGGTAGATTCACAAAAAATTCTTGTGTTTGAAGACGCACCTTCTGGAGTTGGTGCT
GCTAAGAATGCTGGGATGTATGCAGTTATGGTTCCAGATCCAAGGCTTGATATCTCTTTT
CACGAAGCTGCAGACCAAGTTCTGAGCTCCCTACTGGATTTCAATCCAAATGATTGGGGT
TTGCCTCCATTCCCAGACACCACAATCTAAACTTGCAGATCCATCAACACGACAATTGAT
TCAAAGAAGTTCTGGATTTGGGATTGCTGTAGAAGAGA