Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00840.t01
CDS Infomation

cds chromosome:12X:11:18415752:18418607:-1 gene:VIT_11s0052g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCTTCTAATCACAATTGGCTCGCCTTCTCTCTCTCCAACAACTCTCTCCCTTCCGAC
TCCTCCCAACTCTGCCTTTTCGAAGCCCTCTCCGCCTCAACCCATCACAATGGGGGTGTT
GATAGAGAGCAGGGTTTTCCGGATCGTGGTGGCAGTGACCTCATCGGCGGCCCCAAGCTG
GAGGACTTCCTCGGTGGAGGTGGAGGTGGAGGTGGAGCGGGTGCAGGTCTCGATCAGTTC
TCGGCTAAAACTCCGGCGGGTTTGTCTGATGCTGAGATATACGAGTCCGAGCTGAAGACC
ATAGCTGCGAGCTTCTTACGTGGGTTTTCTTCAGAGCAAAGCGAGGCTCAGAAGCAGCTG
GCGCTGACGCCGGAGCCGTCGCCGAAGAAGTCCGTCGACACCTTCGGCCAACGGACCTCC
ATTTACAGAGGAGTTACACGACATAGATGGACAGGGAGATATGAAGCCCATCTCTGGGAC
AACAGCTGCAGAAGAGAAGGACAGAGCCGGAAGGGACGACAAGTTTATTTGGGTGGGTAT
GATAAGGAAGAGAAGGCAGCTAGAGCTTATGATCTCGCCGCTCTTAAGTACTGGGGTCCG
ACCACCACCACTAACTTCCCTGTTTCTAACTATGAGAAAGAACTTGAGAATATGAAGAAC
ATGACTAGGCAAGAGTTTGTTGCTTCACTCAGAAGGAAAAGCTCTGGATTCTCGAGAGGA
GCCTCTATTTACAGAGGAGTCACCAGACACCATCAGCATGGGAGATGGCAAGCCAGAATA
GGAAGAGTTGCTGGGAACAAAGATCTCTATCTTGGAACATTCAGCACTCAAGAAGAAGCA
GCCGAAGCCTATGACATTGCTGCAATCAAATTCAGAGGCCTAAATGCAGTAACCAACTTC
GACATGAGCCGATACGATGTCAAAAGCATTGCCAACAGCAATCTCCCCATCGGAGGAGCA
ATAACCACTGGCAAACCAAAAACATCTCCCTCTGATTCTGCTTCCGATAGTGGAAGTCGC
CGGTCTGAGGAGCAGGTTCAGGTTCTCTCTGGCCCATCAAATACACTCATTTTTTCCAAA
CCCCTCAAGCAAGATCACCATCAATCGGTTGATTACTGGTCCGTACTGGGGTACCAGGCC
TCCACATTGAACAGTGTTGTGAAGAACCCCATATTGGAATCCTCCTTTCCATTTCAGACT
TCTAGCAACTTGACCATGGATTTCTCCACAGCTTCTGCAGGCTTCCTCTGCAATGGTGGT
GGGTACATTCAACAACAACAGAGCAACAGTAGTAGCAGCACTGCTTCAAGTTCAAACTCA
ATCCCATATGCAACACCCGTTAATGGTTTAAACAGCAGTACTAGCTATGAGGTCTCTGGG
TACAACAGCTGGGCTGCTGCGACTGCTGCCGCTGCTGCTGCTGCTGCTGCACCATCTCTT
CATTCATTCCAAGCTGCAAAGCCCAGTCTCTCAGTGTTCCAAACCCCGATATTTGGCATG
GAATGA

Peptide Sequence

PEP ID

VIT_11s0052g00840.t01
PEP Infomation

pep chromosome:12X:11:18415752:18418607:-1 gene:VIT_11s0052g00840 transcript:VIT_11s0052g00840.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASNHNWLAFSLSNNSLPSDSSQLCLFEALSASTHHNGGVDREQGFPDRGGSDLIGGPKL
EDFLGGGGGGGGAGAGLDQFSAKTPAGLSDAEIYESELKTIAASFLRGFSSEQSEAQKQL
ALTPEPSPKKSVDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQVYLGGY
DKEEKAARAYDLAALKYWGPTTTTNFPVSNYEKELENMKNMTRQEFVASLRRKSSGFSRG
ASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNF
DMSRYDVKSIANSNLPIGGAITTGKPKTSPSDSASDSGSRRSEEQVQVLSGPSNTLIFSK
PLKQDHHQSVDYWSVLGYQASTLNSVVKNPILESSFPFQTSSNLTMDFSTASAGFLCNGG
GYIQQQQSNSSSSTASSSNSIPYATPVNGLNSSTSYEVSGYNSWAAATAAAAAAAAAPSL
HSFQAAKPSLSVFQTPIFGME

Transcript Sequence

Transcript ID

VIT_11s0052g00840.t01
Transcript Infomation

cdna chromosome:12X:11:18415752:18418607:-1 gene:VIT_11s0052g00840 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AAGTAGGAATCACCTCTCTTGCTTTTCACCATGGCTTCTAATCACAATTGGCTCGCCTTC
TCTCTCTCCAACAACTCTCTCCCTTCCGACTCCTCCCAACTCTGCCTTTTCGAAGCCCTC
TCCGCCTCAACCCATCACAATGGGGGTGTTGATAGAGAGCAGGGTTTTCCGGATCGTGGT
GGCAGTGACCTCATCGGCGGCCCCAAGCTGGAGGACTTCCTCGGTGGAGGTGGAGGTGGA
GGTGGAGCGGGTGCAGGTCTCGATCAGTTCTCGGCTAAAACTCCGGCGGGTTTGTCTGAT
GCTGAGATATACGAGTCCGAGCTGAAGACCATAGCTGCGAGCTTCTTACGTGGGTTTTCT
TCAGAGCAAAGCGAGGCTCAGAAGCAGCTGGCGCTGACGCCGGAGCCGTCGCCGAAGAAG
TCCGTCGACACCTTCGGCCAACGGACCTCCATTTACAGAGGAGTTACACGACATAGATGG
ACAGGGAGATATGAAGCCCATCTCTGGGACAACAGCTGCAGAAGAGAAGGACAGAGCCGG
AAGGGACGACAAGTTTATTTGGGTGGGTATGATAAGGAAGAGAAGGCAGCTAGAGCTTAT
GATCTCGCCGCTCTTAAGTACTGGGGTCCGACCACCACCACTAACTTCCCTGTTTCTAAC
TATGAGAAAGAACTTGAGAATATGAAGAACATGACTAGGCAAGAGTTTGTTGCTTCACTC
AGAAGGAAAAGCTCTGGATTCTCGAGAGGAGCCTCTATTTACAGAGGAGTCACCAGACAC
CATCAGCATGGGAGATGGCAAGCCAGAATAGGAAGAGTTGCTGGGAACAAAGATCTCTAT
CTTGGAACATTCAGCACTCAAGAAGAAGCAGCCGAAGCCTATGACATTGCTGCAATCAAA
TTCAGAGGCCTAAATGCAGTAACCAACTTCGACATGAGCCGATACGATGTCAAAAGCATT
GCCAACAGCAATCTCCCCATCGGAGGAGCAATAACCACTGGCAAACCAAAAACATCTCCC
TCTGATTCTGCTTCCGATAGTGGAAGTCGCCGGTCTGAGGAGCAGGTTCAGGTTCTCTCT
GGCCCATCAAATACACTCATTTTTTCCAAACCCCTCAAGCAAGATCACCATCAATCGGTT
GATTACTGGTCCGTACTGGGGTACCAGGCCTCCACATTGAACAGTGTTGTGAAGAACCCC
ATATTGGAATCCTCCTTTCCATTTCAGACTTCTAGCAACTTGACCATGGATTTCTCCACA
GCTTCTGCAGGCTTCCTCTGCAATGGTGGTGGGTACATTCAACAACAACAGAGCAACAGT
AGTAGCAGCACTGCTTCAAGTTCAAACTCAATCCCATATGCAACACCCGTTAATGGTTTA
AACAGCAGTACTAGCTATGAGGTCTCTGGGTACAACAGCTGGGCTGCTGCGACTGCTGCC
GCTGCTGCTGCTGCTGCTGCACCATCTCTTCATTCATTCCAAGCTGCAAAGCCCAGTCTC
TCAGTGTTCCAAACCCCGATATTTGGCATGGAATGAGGTCCTGGAACAGGGTATTGAAGG
GCAAATCATGAAGTTGGTAAAACATATAGTTTTGGACAGAGGAGAGATGGACTGACAATG
GTTTCACAGATGAGGTAGCTAGCTACCAGAGCTGACTGGAGAGAGAGAGTAGTACTAACT
GAGGTTTTTTGTGGAGTTCATGCTTTGTTTTCTTTTGTCTTCTTCTACTCATCTTGACTG
ACATGATTTACAAAATGGGTATAATGGGAAACAAAATCCTTTTGTAATCCTTCATATATT
TTTCTCAGTATGAATGTGAATAGTACTCTTCCTCTATA