Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00830.t01
CDS Infomation

cds chromosome:12X:11:18377353:18384742:-1 gene:VIT_11s0052g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCTTCTTCTGAGGGCATTGTGTATGATCCATCAAAAATCAATAAGTTGAGTATG
GAGGAAAAGAGAGAACTTGTCTATGCAGTCTCAAAGTGGTCACGTGGTGGCCCTGAAATG
CTACAGTCATGGAGCCGTCAGGAGATTTTACAGATCCTGTGTGCAGAGATGGGAAAAGAA
AGGAAATATACCGGCTTGACAAAGTTGAAAATTATAGAACACCTTCTAAGAGTTGTTTCT
GAAAAGAATTCAGTGGAGCAAGAGGTGGTTACAAACCATGAAATAAATCATGAATCACAG
CCTTCAGCTGCAACTAACCAAAGAACTTCCAAGAGGCAACGGAAAGCTGATCACCCTTCT
CGATTACCTGTTGCGGCAAACAATCATTCAATCAGTAATGGTGATGGTGATTTAGGCAAT
GCTATATACTGCAAAAACTTAGCTTGCAGAGCTAACTTAAGTCGAGAATATGAATTTTGC
AAGAGGTGTTCATGCTGCATTTGTCATCAATACGATGACAACAAGGATCCTAGCTTGTGG
TTAACTTGCAGCTCGGATCCTCCCTTTCAAGGTGTTTCCTGTGGCATGTCATGTCATCTT
GAATGTGCTTTTAAACATGAAAAATCTGGCATTGCAAAGGATGGGCGGCATGTGAGACTA
GATGGGAGCTTTTATTGTGTATCTTGTGGGAAAGTGAATGATATGCTCGGATGCTGGAGA
AAACAATTGATGATGGCAAAAGAAACCAGAAGAGTGGACATACTATGTTACCGAGTCTCC
TTGAGCCAAAAGCTTCTGAATGGAACAAAAAAGTACCAGAAGCTTTACGAAATTGTTGAG
GAAGCTGTCAAGAAGCTTGAAGCAGAAGTGGGTCCTTTAACTGGTCTACCTGTAAAAACA
GCACGGGGCATCGTTAATAGGCTTTCTTCTGGCCCAGAGGTTCAGAGGCTGTGTGCCCTT
GCATTGGAGTCACTGGATTCCGTGCTCTCAAACTCTCACCCGCGTCCAGCACCCGGCCCT
AAGATCCAAGATGCCGGTTTGGTAGCTCCAAGCATCAGATTTGAAGATGTCTGCTCAACA
TCTCTCACTGTGATTTTGGGTTCAGAAGATTCATCGACAGACAATGTGATCAGTTACAAA
TTATGGCATCGCAAGTCTAACGATTTGGAGTATCCTGCCGAACCTGCTTGTACTATGTTG
GCACCCAACAAGAGGTTTACATTCTCTGATTTAACTCCATCCACAGAGTATGTTTTCAAG
GTCGTTTCCTTCCAGGACACAAGAGAGTTAGGCATGGGTGAAGTTCAGTTCTCGACAAGC
AGCAGTGGAGATGACATCCCAAAGAGTTTGGTAGCAGAGAGGAGTCAAAGCCCCGCCACC
AACTGTAGCAGCCTATCCAATCCTTCCTCTGTGGAAGACGAAACTAATAACGTTACTCCC
TACCATGACCAGAATGAGAATAGGGAGGACAATTATCCGGGTTACTGCAAGGGCACTGAC
AAAACTGTTTCTACAAATCTGTCTAATGAAGCAACGAACTGCACTGGCACTGATCAAGAA
GGAAACCCAGCAGATTCAGTTTTTGTGTCAGATGATGAACGCGATCTGAGGGTTGTTGTC
TCAATGCCTAAAGTCCTCAAACCTGACAACAAGACCTCACTCGAATGCCAGATCATAGAG
GAGATGAGCACTGATAAGGAGGCAAATACTCCTGTTCGGACTGGCATGGAATGCGTGCCC
TTCGTGGGTAGCTCGGAAGCTGGCCTGCCCATTACTCCCTGCAAGCTGGAAATCTTCAAG
GACGGTCTGGGGAGGAATGGGAGGCCTAAACCCAGCACCATGGATCTGGACGATGGGTCT
GGAAAGGGAGACGAGCCCCAAGCTGGCAGCTCATCAAAGAAACGAAGCGCAGAAAGACAG
GATGAGGAATGTGCGGCGAATGGACCTTCTGACAGGGACTTTGAGTACTACGTCAAGGTG
ATCAGATGGTTGGAATGCGAGGGTCACGTCGAGAAGAACTTCAGGCAGAAGTTCTTGACC
TGGTACAGCTTGAGAGCAACTCCACAGGAGGTCAGAATTGTGAAGGTGTTTGTTGATACT
CTCATCGAAGATCCAGCATCACTTGCAGAGCAGCTCATCGATACCTTCTCGGAGACCATC
TCAAGCAAGAGATCATCTGTCGTGCCTGCCGGCTTCTGTATGAAGCTGTGGCATTGA

Peptide Sequence

PEP ID

VIT_11s0052g00830.t01
PEP Infomation

pep chromosome:12X:11:18377353:18384742:-1 gene:VIT_11s0052g00830 transcript:VIT_11s0052g00830.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSSSEGIVYDPSKINKLSMEEKRELVYAVSKWSRGGPEMLQSWSRQEILQILCAEMGKE
RKYTGLTKLKIIEHLLRVVSEKNSVEQEVVTNHEINHESQPSAATNQRTSKRQRKADHPS
RLPVAANNHSISNGDGDLGNAIYCKNLACRANLSREYEFCKRCSCCICHQYDDNKDPSLW
LTCSSDPPFQGVSCGMSCHLECAFKHEKSGIAKDGRHVRLDGSFYCVSCGKVNDMLGCWR
KQLMMAKETRRVDILCYRVSLSQKLLNGTKKYQKLYEIVEEAVKKLEAEVGPLTGLPVKT
ARGIVNRLSSGPEVQRLCALALESLDSVLSNSHPRPAPGPKIQDAGLVAPSIRFEDVCST
SLTVILGSEDSSTDNVISYKLWHRKSNDLEYPAEPACTMLAPNKRFTFSDLTPSTEYVFK
VVSFQDTRELGMGEVQFSTSSSGDDIPKSLVAERSQSPATNCSSLSNPSSVEDETNNVTP
YHDQNENREDNYPGYCKGTDKTVSTNLSNEATNCTGTDQEGNPADSVFVSDDERDLRVVV
SMPKVLKPDNKTSLECQIIEEMSTDKEANTPVRTGMECVPFVGSSEAGLPITPCKLEIFK
DGLGRNGRPKPSTMDLDDGSGKGDEPQAGSSSKKRSAERQDEECAANGPSDRDFEYYVKV
IRWLECEGHVEKNFRQKFLTWYSLRATPQEVRIVKVFVDTLIEDPASLAEQLIDTFSETI
SSKRSSVVPAGFCMKLWH

Transcript Sequence

Transcript ID

VIT_11s0052g00830.t01
Transcript Infomation

cdna chromosome:12X:11:18377353:18384742:-1 gene:VIT_11s0052g00830 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTCTAGGCCTCTTCGAATCTCCCTTTGCTGCTTCGGGTCCTGAAAACCCCATCATCAGGA
CCCATTTTTTTTTCATGGATTCCATCTTGGTATTTGTTCACAAAAGTTGGGGTCTTGGTG
GTAATGTGGTGGGCTGAGTGTGGTGGTGTTCTACGGCTATGGATTCTTCTTCTGAGGGCA
TTGTGTATGATCCATCAAAAATCAATAAGTTGAGTATGGAGGAAAAGAGAGAACTTGTCT
ATGCAGTCTCAAAGTGGTCACGTGGTGGCCCTGAAATGCTACAGTCATGGAGCCGTCAGG
AGATTTTACAGATCCTGTGTGCAGAGATGGGAAAAGAAAGGAAATATACCGGCTTGACAA
AGTTGAAAATTATAGAACACCTTCTAAGAGTTGTTTCTGAAAAGAATTCAGTGGAGCAAG
AGGTGGTTACAAACCATGAAATAAATCATGAATCACAGCCTTCAGCTGCAACTAACCAAA
GAACTTCCAAGAGGCAACGGAAAGCTGATCACCCTTCTCGATTACCTGTTGCGGCAAACA
ATCATTCAATCAGTAATGGTGATGGTGATTTAGGCAATGCTATATACTGCAAAAACTTAG
CTTGCAGAGCTAACTTAAGTCGAGAATATGAATTTTGCAAGAGGTGTTCATGCTGCATTT
GTCATCAATACGATGACAACAAGGATCCTAGCTTGTGGTTAACTTGCAGCTCGGATCCTC
CCTTTCAAGGTGTTTCCTGTGGCATGTCATGTCATCTTGAATGTGCTTTTAAACATGAAA
AATCTGGCATTGCAAAGGATGGGCGGCATGTGAGACTAGATGGGAGCTTTTATTGTGTAT
CTTGTGGGAAAGTGAATGATATGCTCGGATGCTGGAGAAAACAATTGATGATGGCAAAAG
AAACCAGAAGAGTGGACATACTATGTTACCGAGTCTCCTTGAGCCAAAAGCTTCTGAATG
GAACAAAAAAGTACCAGAAGCTTTACGAAATTGTTGAGGAAGCTGTCAAGAAGCTTGAAG
CAGAAGTGGGTCCTTTAACTGGTCTACCTGTAAAAACAGCACGGGGCATCGTTAATAGGC
TTTCTTCTGGCCCAGAGGTTCAGAGGCTGTGTGCCCTTGCATTGGAGTCACTGGATTCCG
TGCTCTCAAACTCTCACCCGCGTCCAGCACCCGGCCCTAAGATCCAAGATGCCGGTTTGG
TAGCTCCAAGCATCAGATTTGAAGATGTCTGCTCAACATCTCTCACTGTGATTTTGGGTT
CAGAAGATTCATCGACAGACAATGTGATCAGTTACAAATTATGGCATCGCAAGTCTAACG
ATTTGGAGTATCCTGCCGAACCTGCTTGTACTATGTTGGCACCCAACAAGAGGTTTACAT
TCTCTGATTTAACTCCATCCACAGAGTATGTTTTCAAGGTCGTTTCCTTCCAGGACACAA
GAGAGTTAGGCATGGGTGAAGTTCAGTTCTCGACAAGCAGCAGTGGAGATGACATCCCAA
AGAGTTTGGTAGCAGAGAGGAGTCAAAGCCCCGCCACCAACTGTAGCAGCCTATCCAATC
CTTCCTCTGTGGAAGACGAAACTAATAACGTTACTCCCTACCATGACCAGAATGAGAATA
GGGAGGACAATTATCCGGGTTACTGCAAGGGCACTGACAAAACTGTTTCTACAAATCTGT
CTAATGAAGCAACGAACTGCACTGGCACTGATCAAGAAGGAAACCCAGCAGATTCAGTTT
TTGTGTCAGATGATGAACGCGATCTGAGGGTTGTTGTCTCAATGCCTAAAGTCCTCAAAC
CTGACAACAAGACCTCACTCGAATGCCAGATCATAGAGGAGATGAGCACTGATAAGGAGG
CAAATACTCCTGTTCGGACTGGCATGGAATGCGTGCCCTTCGTGGGTAGCTCGGAAGCTG
GCCTGCCCATTACTCCCTGCAAGCTGGAAATCTTCAAGGACGGTCTGGGGAGGAATGGGA
GGCCTAAACCCAGCACCATGGATCTGGACGATGGGTCTGGAAAGGGAGACGAGCCCCAAG
CTGGCAGCTCATCAAAGAAACGAAGCGCAGAAAGACAGGATGAGGAATGTGCGGCGAATG
GACCTTCTGACAGGGACTTTGAGTACTACGTCAAGGTGATCAGATGGTTGGAATGCGAGG
GTCACGTCGAGAAGAACTTCAGGCAGAAGTTCTTGACCTGGTACAGCTTGAGAGCAACTC
CACAGGAGGTCAGAATTGTGAAGGTGTTTGTTGATACTCTCATCGAAGATCCAGCATCAC
TTGCAGAGCAGCTCATCGATACCTTCTCGGAGACCATCTCAAGCAAGAGATCATCTGTCG
TGCCTGCCGGCTTCTGTATGAAGCTGTGGCATTGACAGGTTCAGAATTGGGTCCTGCAAT
TGCATTCAATGATTTTTAAGCACAAATCCAAGCAGGGTTTGTGTAGTAGTTGTGATTCTT
TGGATCCCCAGAAAATGTTTTCTAACATTTCTTCATTTAGACTTATCATTATTTATATTG
ATCATTGTCCTTTGCCATTTTTATTTTGATGTAAGAATCTTTAGAGCTAATTCTATTTTA
TAGAGCAGTTGGCTGTCTCATTCAAAGATAA