Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00800.t01
CDS Infomation

cds chromosome:12X:11:18358275:18361493:-1 gene:VIT_11s0052g00800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAGATACATAAGGTCTGGCAGCTTCAAGAGGCTCTTCTCGGCTAAGAGGCGCAGTTTT
GAGGAGGAAAGCCAGACCCCAGGTGGCTGTGCTCATGATGACGGCAATGAGGCCTTCGGG
GTTGGTGGGAATGAAACAAAGCACCCGCAGAAACCCACCTGGAAATGCTTCTCCTATGAG
GAGATTTTTCATGCCACCAGTGGGTTCAGCTCAGATAATTTGGTTGGAAAAGGAGGGTAT
GCAGAGGTGTACAGAGGAACCCTGGAAGATGGTGAGGCTGTTGCTGTGAAAAGGCTGACA
AAAGCTTCCACTGATGAGAGAAAAGAGAAGGAGTTTCTCACAGAGATTGGAACAATTGGT
CATGTATGCCATCCGAATGTCTCCTCACTCTTGGGCTGTTGTATAGACAATGGGCTCTAT
CTCATCTTCCAGTTCTTTTCAAGAGGCTCTGTTTCTTCTGTTCTTCATGATGAGAATTCT
CTGTCATTGGATTGGAAAATAAGGTATAAGATTGCAGTTGGGACAGCCCGGGGCCTCCAT
TATCTGCATAAAGGCTGCCAGAGGAGGATAATTCACCGAGACATCAAGGCCTCCAACGTT
CTATTGACTGCAGATTATGAGCCACAGATATCAGATTTCGGGTTAGCGAAATGGCTTCCA
TCGCAATGGACTCATCATTCAATTGTTCCAATAGAAGGAACATTTGGCCATTTAGCACCC
GAATACTTCATGCATGGGATTGTTGATGAGAAGACCGATGTCTTTGCCTTTGGAGTCTTC
CTCCTGGAGATCATTTCTGGCCGAAAACCGGTTGATGGGTCTCACCAAAGCTTGCATAGC
TGGGCCAGACCTATCCTAAACCAAGGGGAAATTGAGAAGGTTGTGGACCCAAGGCTTGGA
GGGATCTATGATGTTGCCCAGCTGAAGCGACTCACCTTTGCGTCGTCTCTTTGCATTAGG
TCATCATCCATCTGGCGCCCGACCATGAGTGAGGTATTGGAGGCGATGCTGGGAGGGGAG
ATTGACGAAGAGAGGTGGAAGATGCCCGAGGAAGAAGAAGAGCAGGAAGAGTTCTGGGGT
TTTGATGATCTTGAATGTGAAAGTGACTCTTCCTTCTCAACATCCCCACATGACTCAATC
TCAACCCGAAGTATTTCTTAA

Peptide Sequence

PEP ID

VIT_11s0052g00800.t01
PEP Infomation

pep chromosome:12X:11:18358275:18361493:-1 gene:VIT_11s0052g00800 transcript:VIT_11s0052g00800.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MRYIRSGSFKRLFSAKRRSFEEESQTPGGCAHDDGNEAFGVGGNETKHPQKPTWKCFSYE
EIFHATSGFSSDNLVGKGGYAEVYRGTLEDGEAVAVKRLTKASTDERKEKEFLTEIGTIG
HVCHPNVSSLLGCCIDNGLYLIFQFFSRGSVSSVLHDENSLSLDWKIRYKIAVGTARGLH
YLHKGCQRRIIHRDIKASNVLLTADYEPQISDFGLAKWLPSQWTHHSIVPIEGTFGHLAP
EYFMHGIVDEKTDVFAFGVFLLEIISGRKPVDGSHQSLHSWARPILNQGEIEKVVDPRLG
GIYDVAQLKRLTFASSLCIRSSSIWRPTMSEVLEAMLGGEIDEERWKMPEEEEEQEEFWG
FDDLECESDSSFSTSPHDSISTRSIS

Transcript Sequence

Transcript ID

VIT_11s0052g00800.t01
Transcript Infomation

cdna chromosome:12X:11:18358275:18361493:-1 gene:VIT_11s0052g00800 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CTTTTCTTCACTTTCTGGGTACCGTTTTTGTGTGGTCTTTCATGATTTGGAAGTCCCTGC
AATGAGATACATAAGGTCTGGCAGCTTCAAGAGGCTCTTCTCGGCTAAGAGGCGCAGTTT
TGAGGAGGAAAGCCAGACCCCAGGTGGCTGTGCTCATGATGACGGCAATGAGGCCTTCGG
GGTTGGTGGGAATGAAACAAAGCACCCGCAGAAACCCACCTGGAAATGCTTCTCCTATGA
GGAGATTTTTCATGCCACCAGTGGGTTCAGCTCAGATAATTTGGTTGGAAAAGGAGGGTA
TGCAGAGGTGTACAGAGGAACCCTGGAAGATGGTGAGGCTGTTGCTGTGAAAAGGCTGAC
AAAAGCTTCCACTGATGAGAGAAAAGAGAAGGAGTTTCTCACAGAGATTGGAACAATTGG
TCATGTATGCCATCCGAATGTCTCCTCACTCTTGGGCTGTTGTATAGACAATGGGCTCTA
TCTCATCTTCCAGTTCTTTTCAAGAGGCTCTGTTTCTTCTGTTCTTCATGATGAGAATTC
TCTGTCATTGGATTGGAAAATAAGGTATAAGATTGCAGTTGGGACAGCCCGGGGCCTCCA
TTATCTGCATAAAGGCTGCCAGAGGAGGATAATTCACCGAGACATCAAGGCCTCCAACGT
TCTATTGACTGCAGATTATGAGCCACAGATATCAGATTTCGGGTTAGCGAAATGGCTTCC
ATCGCAATGGACTCATCATTCAATTGTTCCAATAGAAGGAACATTTGGCCATTTAGCACC
CGAATACTTCATGCATGGGATTGTTGATGAGAAGACCGATGTCTTTGCCTTTGGAGTCTT
CCTCCTGGAGATCATTTCTGGCCGAAAACCGGTTGATGGGTCTCACCAAAGCTTGCATAG
CTGGGCCAGACCTATCCTAAACCAAGGGGAAATTGAGAAGGTTGTGGACCCAAGGCTTGG
AGGGATCTATGATGTTGCCCAGCTGAAGCGACTCACCTTTGCGTCGTCTCTTTGCATTAG
GTCATCATCCATCTGGCGCCCGACCATGAGTGAGGTATTGGAGGCGATGCTGGGAGGGGA
GATTGACGAAGAGAGGTGGAAGATGCCCGAGGAAGAAGAAGAGCAGGAAGAGTTCTGGGG
TTTTGATGATCTTGAATGTGAAAGTGACTCTTCCTTCTCAACATCCCCACATGACTCAAT
CTCAACCCGAAGTATTTCTTAAAGATCATTTGGTGAATTAGGCGCTTGAGACTGCCTGAT
AATCTCCGTTTTTTTATTGAAATATATATGTATGTACGTATGTATATATATATATATATG
TAAACTTGGCAGGCATACATATAAACGAATATAGAAACAGCTGTTGTAGCAACCCCACTG
GCTTCCAATCAGTGTCTCTATAAGAGAAAATTTTGTGG