Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00700.t01
CDS Infomation

cds chromosome:12X:11:18219560:18229608:-1 gene:VIT_11s0052g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCCTCGCCTCCTAGCAGAAGGCTGCCGACCACCGCATCATTCTCCAGCTTTATTCTTT
TTCCTAGTAGCAGCAGTTGTGCTTCTAATATTTCTGATTCTCATTTTAGTCTCATGGAAA
TTTAAAAATTTAGCAGAGCTGAAGAAGTTGGTTACAGAAACTAAAAGGCTTCAAGAAGCC
AAAGATTTTTGTAGTGGAAATCTTCGAACAGTAGGCCAATTTGACTTCCGCTCATTAAAG
AAGGCCACAAAGAACTTTCACCCCAGTAATCTTCTAGGAAGAGGTGGATTTGGGCCTGTT
TATCGGGGAAAATTAAGAGATGGAAAGTTGGTGGCTGTAAAGAAATTATCTCTTGACAAG
TCCCAGCAAGGAGAAGCAGAGTTCCTTGCAGAGGTGAAGATGATCACAAGCATCCAACAC
AAGAATCTGGTTCGTCTTCTTGGATGTTGCTCAGATGGGCCTCAAAGGTTGCTTGTGTAT
GAATACATGAAAAATAGGAGCTTGGACCTCATCATATATGAAAGAAATGATCAGTTCCTG
AATTGGAATACTCGATTCCAAATAATACTTGGCATTGCTCGAGGATTGCAGTACCTACAT
GAAGATTCACACCTGAGAATTGTTCACAGAGATATCAAAGCAAGCAACATTCTTCTTGAT
GACAGATTTCAACCAAGGATTGGAGATTTTGGGCTGGCTAGGTTCTTCCCAGAGGACGAG
GCTTATCTCAGCACTGCCTTTGCTGGAACTCTAGGTTATACAGCACCTGAATATGCCATT
AGAGGAGAATTGTCTGAAAAGGCTGACATCTACAGCTTTGGAGTTTTGGTACTTGAAATC
ATCGGCTGCAGGAAAAACACCGATCTTACTTTATCATCAGAAATGCAATATCTCCCTGAA
TATGCTTGGAAGCTATATGAGAAGTCCAGGGTGATTGATCTGGTAGATCCAAGAATTCAA
GAAGATGGGTTTGTGGAGAACCATGTGTTGCAAGTAAACCATGTGTTGCAAGTAATCCAT
GTGGCCTTGTTTTGTCTTCAACCTTATGCAAACTTGAGACCGCCAATGTCAGAGGTCGTA
GCAGTGTTAACATGCAGAGCTGATATGGTTGGAACACCCATGAAACCGGCCTTTTTGGAC
CGCAAGCAGGACAAGAACATCTCTTCGGATACTATTTCAGAGGCTTTCCCTTCTCCTCTG
CACAGTGATTCTCCTTCCTCATCTCAACAGCCAAAGATTTCAGAGGCTTTCCCTTCTCCT
CTGCACAGTGATTCTCCTTCCTCATCTCAACAGCCAAAGATTTCAGAGGCTTTCCCTTCT
CCTCTGCACGGTGATTCTCCTTCCTCATCTCAACAGCCAAAGTGA

Peptide Sequence

PEP ID

VIT_11s0052g00700.t01
PEP Infomation

pep chromosome:12X:11:18219560:18229608:-1 gene:VIT_11s0052g00700 transcript:VIT_11s0052g00700.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MPRLLAEGCRPPHHSPALFFFLVAAVVLLIFLILILVSWKFKNLAELKKLVTETKRLQEA
KDFCSGNLRTVGQFDFRSLKKATKNFHPSNLLGRGGFGPVYRGKLRDGKLVAVKKLSLDK
SQQGEAEFLAEVKMITSIQHKNLVRLLGCCSDGPQRLLVYEYMKNRSLDLIIYERNDQFL
NWNTRFQIILGIARGLQYLHEDSHLRIVHRDIKASNILLDDRFQPRIGDFGLARFFPEDE
AYLSTAFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIIGCRKNTDLTLSSEMQYLPE
YAWKLYEKSRVIDLVDPRIQEDGFVENHVLQVNHVLQVIHVALFCLQPYANLRPPMSEVV
AVLTCRADMVGTPMKPAFLDRKQDKNISSDTISEAFPSPLHSDSPSSSQQPKISEAFPSP
LHSDSPSSSQQPKISEAFPSPLHGDSPSSSQQPK

Transcript Sequence

Transcript ID

VIT_11s0052g00700.t01
Transcript Infomation

cdna chromosome:12X:11:18219560:18229608:-1 gene:VIT_11s0052g00700 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCTATACGATCATATCAATATTCTATTGCTTGCCGAGAAGTTTCCAGTTACCACGGTTTC
CAGCTTATCCCCAGCAATTGTGGCAACAAGAAAGCATCCCATAGCCGTCTCCAAGGAAGA
CATTTGTCTCTGTCCCGTCCTTTCTCTCTTCATCTCCGTCTCTACCAAAGAAAACAAACT
CCGCGTCTTCCAAACTCCAAATTCCATCGATTATTCCCATGCTCCACCCTCATTCTCTAT
CTCACTGTTTCCCAAGTCACCAAAGAACAAGAAAAAAAAAAAGGAAAAAAAAAAAAGAAG
GAAAGATAGGAAGATAGAAATAGGAAATGGTGGCTGCCTTTTGTTGAAGCTACTGCACCT
TTCGTCACTGCACCCAACATCAGTGCTGTGCTTGATGGTTGAGGATGCCTCGCCTCCTAG
CAGAAGGCTGCCGACCACCGCATCATTCTCCAGCTTTATTCTTTTTCCTAGTAGCAGCAG
TTGTGCTTCTAATATTTCTGATTCTCATTTTAGTCTCATGGAAATTTAAAAATTTAGCAG
AGCTGAAGAAGTTGGTTACAGAAACTAAAAGGCTTCAAGAAGCCAAAGATTTTTGTAGTG
GAAATCTTCGAACAGTAGGCCAATTTGACTTCCGCTCATTAAAGAAGGCCACAAAGAACT
TTCACCCCAGTAATCTTCTAGGAAGAGGTGGATTTGGGCCTGTTTATCGGGGAAAATTAA
GAGATGGAAAGTTGGTGGCTGTAAAGAAATTATCTCTTGACAAGTCCCAGCAAGGAGAAG
CAGAGTTCCTTGCAGAGGTGAAGATGATCACAAGCATCCAACACAAGAATCTGGTTCGTC
TTCTTGGATGTTGCTCAGATGGGCCTCAAAGGTTGCTTGTGTATGAATACATGAAAAATA
GGAGCTTGGACCTCATCATATATGAAAGAAATGATCAGTTCCTGAATTGGAATACTCGAT
TCCAAATAATACTTGGCATTGCTCGAGGATTGCAGTACCTACATGAAGATTCACACCTGA
GAATTGTTCACAGAGATATCAAAGCAAGCAACATTCTTCTTGATGACAGATTTCAACCAA
GGATTGGAGATTTTGGGCTGGCTAGGTTCTTCCCAGAGGACGAGGCTTATCTCAGCACTG
CCTTTGCTGGAACTCTAGGTTATACAGCACCTGAATATGCCATTAGAGGAGAATTGTCTG
AAAAGGCTGACATCTACAGCTTTGGAGTTTTGGTACTTGAAATCATCGGCTGCAGGAAAA
ACACCGATCTTACTTTATCATCAGAAATGCAATATCTCCCTGAATATGCTTGGAAGCTAT
ATGAGAAGTCCAGGGTGATTGATCTGGTAGATCCAAGAATTCAAGAAGATGGGTTTGTGG
AGAACCATGTGTTGCAAGTAAACCATGTGTTGCAAGTAATCCATGTGGCCTTGTTTTGTC
TTCAACCTTATGCAAACTTGAGACCGCCAATGTCAGAGGTCGTAGCAGTGTTAACATGCA
GAGCTGATATGGTTGGAACACCCATGAAACCGGCCTTTTTGGACCGCAAGCAGGACAAGA
ACATCTCTTCGGATACTATTTCAGAGGCTTTCCCTTCTCCTCTGCACAGTGATTCTCCTT
CCTCATCTCAACAGCCAAAGATTTCAGAGGCTTTCCCTTCTCCTCTGCACAGTGATTCTC
CTTCCTCATCTCAACAGCCAAAGATTTCAGAGGCTTTCCCTTCTCCTCTGCACGGTGATT
CTCCTTCCTCATCTCAACAGCCAAAGTGAGGCCACTTCGCACTTCCCATCTTAATATAGC
TCCTACGATTTGAGTCTGATTCCAACTTCCCTCTGGTTTCTTGCGGCTAGTGCTAGTTTC
CTTTCCCATGTCAACACAGAAAAAGGATTGAGACCCACCATATGATGTCAAGGGCATACT
CTGTTCTGTTGGCTCTTCTTTCTTTTTCAATGTAATATGGTGAGATTATAATCCAACTTG
GAAGAAGCTGAAAACAACGGCAAGGGACGACCCTGACCAATCCATATTTATAACTTCTGC
AGAAATAGCTGAAGATTTTCCTGTTCAAAATTCATTTGGTGATCATTTCATCAAAATTCT
AGTTAGAAATGTAGACGTGTTCAAAAACGGTTGCAGGGTATCTATTCTTTTTGTGGTTGC
AGTCTGAGATTTCGCCCTGTGGTCTTTACTTTTGTGAAGTTTTGCATGATATGCCGTATG
AGAATCTATCATGTATCTTCAAGAGAATAAAAAATAAACTTTCCCTTGT