Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00610.t01
CDS Infomation

cds chromosome:12X:11:18056319:18065859:1 gene:VIT_11s0052g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGATTCTATGCTTATTGGGTCCTTTCCGCGACCTTGTTCCTCTTATGTTTCCAGTGAT
GACTGGAGAACTGTCAAATTCAAGCTGGGCCATTCTCCAAGTTCCTATGTTCCAGTCCAG
ATTTCGAGGAATGGAGCAGGAAGATCTTATACTGTGAGCTTCCAGCAGCATCTTACAAAG
CATCATGTTAGAGGTATTCAGGAAGGATGCACATTCTACAAGAGATGGAATACAAAGTGT
GTTGTGAATGCAGCCTCTGGACAACCTCTTGAATCTGAGCCTGGAGCTTCTAGTCCAAAG
AGCACTTTGACACCTGTGAAAAATGCCTTAGATGCTTTCTACAGGTTTTCACGGCCTCAC
ACAGTGATAGGCACAGCATTAAGCATAATCTCAGTTTCCCTCCTCGCAGTCGAGAAACTT
TCAGACTTTTCTCCGTTATTCTTTACTGGGGTCTTGGAGGCAGTGGTAGCTGCCCTCTTA
ATGAATATTTACATTGTTGGTTTAAATCAGATATCTGACATAGAGATAGACAAGGTTAAC
AAGCCATATCTTCCATTGGCATCAGGGGAATATTCTGTTGGAACTGGTGTTGGAATTGTC
ACATCTTTTGCCTTTATGAGTTTTTTGGTCGGATGGATTGTTGGTTCATGGCCGCTATTT
TGGGCTCTTTTTGTTAGTTTTGTGCTTGGAACTGCATATTCCATTGATTTGCCACTCTTG
AGATGGAAGAGATTTGCTCTGGTCGCAGCAATGTGCATCCTTGCTGTTCGGGCAGTGATC
GTTCAAATTGCATTTTATATGCACGTGCAGACTTTCGTGTATGGAAGACCAGCAGTCTTT
TCAAGGCCTCTGATTTTTGCCACCGCATTCATGAGCTTCTTCTCAGTTGTTATAGCCTTG
TTTAAGGATATACCTGATATTGAAGGGGACAGGATATTCGGCATCCGGTCGTTTAGTGTA
CGTTTGGGTCAGAAGCGGGTGTTTTGGATTTGTATTTTGTTACTTCAAATGGCTTATGGT
GCTGCAGTTTCAGTTGGAGCAACATCTTCCTGCCTTTGGAGCAAACTCGTCACGGTGTTG
GGACACGCTGTTTTGGCTTCTATTCTTTGGACCCGAGCCAAGTCTGTTGATCTAAAGAGC
AAGGCTGCAATAACATCCTTCTACATGTTTATATGGCAGCTCTTTTATGCTGAGTATTTT
CTGATTCCACTTGTAAGGTGA

Peptide Sequence

PEP ID

VIT_11s0052g00610.t01
PEP Infomation

pep chromosome:12X:11:18056319:18065859:1 gene:VIT_11s0052g00610 transcript:VIT_11s0052g00610.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MDSMLIGSFPRPCSSYVSSDDWRTVKFKLGHSPSSYVPVQISRNGAGRSYTVSFQQHLTK
HHVRGIQEGCTFYKRWNTKCVVNAASGQPLESEPGASSPKSTLTPVKNALDAFYRFSRPH
TVIGTALSIISVSLLAVEKLSDFSPLFFTGVLEAVVAALLMNIYIVGLNQISDIEIDKVN
KPYLPLASGEYSVGTGVGIVTSFAFMSFLVGWIVGSWPLFWALFVSFVLGTAYSIDLPLL
RWKRFALVAAMCILAVRAVIVQIAFYMHVQTFVYGRPAVFSRPLIFATAFMSFFSVVIAL
FKDIPDIEGDRIFGIRSFSVRLGQKRVFWICILLLQMAYGAAVSVGATSSCLWSKLVTVL
GHAVLASILWTRAKSVDLKSKAAITSFYMFIWQLFYAEYFLIPLVR

Transcript Sequence

Transcript ID

VIT_11s0052g00610.t01
Transcript Infomation

cdna chromosome:12X:11:18056319:18065859:1 gene:VIT_11s0052g00610 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TCGTCTTATAATTTAGTAACAAATACATCCAAGGAGGCCAGGACCCAGATTAGAGAGACT
TTTTGTTTTCTGGGTCTTGTTATAAAGAGTGAAAACTGGTGGGAATCTCCGTTGCATTCA
CTTTTGAAGAGACCCATGGATTCTATGCTTATTGGGTCCTTTCCGCGACCTTGTTCCTCT
TATGTTTCCAGTGATGACTGGAGAACTGTCAAATTCAAGCTGGGCCATTCTCCAAGTTCC
TATGTTCCAGTCCAGATTTCGAGGAATGGAGCAGGAAGATCTTATACTGTGAGCTTCCAG
CAGCATCTTACAAAGCATCATGTTAGAGGTATTCAGGAAGGATGCACATTCTACAAGAGA
TGGAATACAAAGTGTGTTGTGAATGCAGCCTCTGGACAACCTCTTGAATCTGAGCCTGGA
GCTTCTAGTCCAAAGAGCACTTTGACACCTGTGAAAAATGCCTTAGATGCTTTCTACAGG
TTTTCACGGCCTCACACAGTGATAGGCACAGCATTAAGCATAATCTCAGTTTCCCTCCTC
GCAGTCGAGAAACTTTCAGACTTTTCTCCGTTATTCTTTACTGGGGTCTTGGAGGCAGTG
GTAGCTGCCCTCTTAATGAATATTTACATTGTTGGTTTAAATCAGATATCTGACATAGAG
ATAGACAAGGTTAACAAGCCATATCTTCCATTGGCATCAGGGGAATATTCTGTTGGAACT
GGTGTTGGAATTGTCACATCTTTTGCCTTTATGAGTTTTTTGGTCGGATGGATTGTTGGT
TCATGGCCGCTATTTTGGGCTCTTTTTGTTAGTTTTGTGCTTGGAACTGCATATTCCATT
GATTTGCCACTCTTGAGATGGAAGAGATTTGCTCTGGTCGCAGCAATGTGCATCCTTGCT
GTTCGGGCAGTGATCGTTCAAATTGCATTTTATATGCACGTGCAGACTTTCGTGTATGGA
AGACCAGCAGTCTTTTCAAGGCCTCTGATTTTTGCCACCGCATTCATGAGCTTCTTCTCA
GTTGTTATAGCCTTGTTTAAGGATATACCTGATATTGAAGGGGACAGGATATTCGGCATC
CGGTCGTTTAGTGTACGTTTGGGTCAGAAGCGGGTGTTTTGGATTTGTATTTTGTTACTT
CAAATGGCTTATGGTGCTGCAGTTTCAGTTGGAGCAACATCTTCCTGCCTTTGGAGCAAA
CTCGTCACGGTGTTGGGACACGCTGTTTTGGCTTCTATTCTTTGGACCCGAGCCAAGTCT
GTTGATCTAAAGAGCAAGGCTGCAATAACATCCTTCTACATGTTTATATGGCAGCTCTTT
TATGCTGAGTATTTTCTGATTCCACTTGTAAGGTGAGTTTTCCGGGAAAATTTGCAGAAG
GGGGTCTGATTGTTCAAATGATGTTCCTCTTGGAAGAAGTTACCAAAACTGTTTGGAATG
TTGTTGTTATGGGTAGATATTGTGGGTGAAATTGGAATTTTCATCAGACTTATAAAATCG
GCTACAATCTGTATATTTTCTGACAAATATGTATATATTTTCCGCACAATAAAAATCTTC
AAACCTTTAAATAAAATCTTCAA