Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00600.t01
CDS Infomation

cds chromosome:12X:11:18042963:18045734:-1 gene:VIT_11s0052g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGGTACCCTTTTCCCAAACAGGCCTTCATTCCCAATTCCAAGGACAAAATCAACT
CAACCCAACCACCCCCATGTGAAATTCAACCCTGCAACTCTTCCTCTCCCTCCCCAATCC
CCATCTCCTCCTTCTCTGCCATTGGACTCTCTCCTTCAGCATCTGCTTCACTTCTCTTCA
CCTACCCACAAGCCCAAACCCATCAACCCACCTAAAACCAATTTGAAGAAATTCAGTGCT
GTTTCAGTGTCACAGTTGGAGGGCAGTGTAGAGGAGGCTCAATCACCAGATGGGTCTGTA
GAATTCTTGTCAAGGAAGGGTAAGTTTCTGCTGAATTCCATTGTGGAACACCCTTTACCT
GGTTTGAATGATTTCTTTGATTCTGTGAAGTTTGAGTTGCTTGATGTTGATTTGGTTAGT
CTCTTGAAGGGGTTAGATCTTTCGGGCAATTGGAAAAGAGCTGTTTTGTTGTTTAAATGG
GCTATTTTGAATTTATACTCTAGAAATGAGAAGATAGATAATCAGCTTGTTGAACTGATG
GTTAGGATTCTTGGGAGGGAGTCTCAGCATTCGGTTGCATTGAGGCTGCTTGATGAAATT
TCTGTTGAGGAATATTCACTGGATGTCCGAGCCTGGACTACCATTCTTCATGCATATTCT
CGTATTGGCAAGTATGAGAGAGCGATTACTATGTTTGAGAAAATGAGGAAGACGGGCCTA
TCTCCAACTCTGGTCACCTATAATGTCATGCTTGATGTTTATGGGAAGATGGGTAGGTCT
TGGAATAAAATTTTAGGCCTCTTGGATGAGATGAGAAGCAATGGACTTGAGTTTGATGAG
TTCACTTGCAGCACTGTGATATCTGCTTGTGGGAGAGAGGGGCTGTTGGATGAAGCCAGG
AAGTTCTTTGCCAGATTGAAGTCAGAGGGTTATGTTGCGGGAACTTTTACTTACAATTCT
TTGTTGCAGGTGTTTGGGAAGGCCGGGATTTACTCAGAGGCTTTGAGTATTTTGAAAGAG
ATGGAGAAAAATAACTGCCCACCTGACTTGGTGACTTACAATGAGCTTGTGGCAGCTTAT
GTAAGAGCAGGATTCCATGAGGAAGGAGCTGACTTCATAGATACAATGATCCGTAAGGGA
ATAATGCCAAATGCCATCACATATACTACTGTCATAAATGCCTATGGCAAAGCTGGAAAG
GAGGACAAGGCCTTGAGTTTCTTCAGGCAGATGAAGGAATCGGGTTGTGTTCCTAATGTG
TGTACATATAATGCCATCCTTGGTATGTTGGGGAAGAAGTCACGGTTAGAAGAGATGATA
GATATGCTTTGTGATATGAGATCAAATGGATGTGCCCCTAACTCAGTTACCTGGAATACA
ATGCTTGCCATGTGTGGAAATAAGGGTATGCACAAGTATGTGAACCGGGTATTCCGTGAG
ATGAAGAGTTGTGGTTTTGAGCCTAACAGAGACACATTTAATGCTTTGATTGGTGCATAT
GGCCGATGTGGGTCCCAAATTGATGTCGTCAAAATGTATGAGGAAATGATTAAAGCTGGG
TTTACTCCATGTGTTACAACTTACAATGCACTTCTGAATGCACTTGCTCGGCGAGGGGAT
TGGGAAGCAGCAGAGTCTGTGATTCTAGACATGAAGAGCAAGGGATTTAAGCCTAATGAA
ACCTCATACTCATTGATGCTCAATTGTTATGCAAAGGGAGGGAACGGGAGGGGAATAGAG
AAGATTGAGGAAGAAATTTATAATGGACATATTTTTCCCAGCTGGATACTTTTGAGAACC
CTAGTTCTTGCAAACTTCAAGCGTAGAGCACTGATGGGCATGGAGAGAGCATTTCAAGAA
TTTTGCAAGCATGGATACAAACCTGATTTGGTTTTGTTTAACTCAATGCTTTCGATTTTT
GCCAAGAACAAGATGTATGATCGTGCCCATGAGATGCTGCGGTTGATACGTGAGAGTGGA
TTGCAGCCTGATCTAGTCACATACAATAGCTTGATGGACATGTATGCCAGAGGGGGAGAG
TGTTGGAAAGGAGAAGAAATCCTCAAAGGGATACAAAAATCTGGCGGAAAACCGGACCTT
GTTTCTTATAACACTGTAATCAAAGGATTTTGTAGGCAAGGGCTCATGCAGGAGGCAATA
AGAACTCTCTCAGAGATGACAATTAGTGGGATCCGACCTTGTATAGTCACTTACAATACT
TTTGTAGCAGGCTATTCAGGGAAAGGAATGTTTAGTGAAGTTGAAGAGGTGATCAGTTAT
ATGATTCAGCATGATTGCAGACCCAATGAGCTAACCTATAAGATTGTGGTGGATGGTTAT
TGTAAAGGCAAAAAATACAAAGAAGCTATGGATTTTGTGTCAAATATTACAGAGATGGAT
AAGTCCTTCGATGATCAATCATTGCGAAGGCTCACTTTCCGTATTAGGGAGCATATGGAA
TTATGA

Peptide Sequence

PEP ID

VIT_11s0052g00600.t01
PEP Infomation

pep chromosome:12X:11:18042963:18045734:-1 gene:VIT_11s0052g00600 transcript:VIT_11s0052g00600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEGTLFPNRPSFPIPRTKSTQPNHPHVKFNPATLPLPPQSPSPPSLPLDSLLQHLLHFSS
PTHKPKPINPPKTNLKKFSAVSVSQLEGSVEEAQSPDGSVEFLSRKGKFLLNSIVEHPLP
GLNDFFDSVKFELLDVDLVSLLKGLDLSGNWKRAVLLFKWAILNLYSRNEKIDNQLVELM
VRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGL
SPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEAR
KFFARLKSEGYVAGTFTYNSLLQVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAY
VRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNV
CTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFRE
MKSCGFEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKAGFTPCVTTYNALLNALARRGD
WEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRT
LVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESG
LQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAI
RTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVISYMIQHDCRPNELTYKIVVDGY
CKGKKYKEAMDFVSNITEMDKSFDDQSLRRLTFRIREHMEL

Transcript Sequence

Transcript ID

VIT_11s0052g00600.t01
Transcript Infomation

cdna chromosome:12X:11:18042963:18045734:-1 gene:VIT_11s0052g00600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGTGAATCGAGTGATGCTCTCTTGGCCTCCACCTGCTATCCATTCCCAAGCTCTCTGATG
CTCTAAAAACTGCCAAAAACCCTCAAAATTTTCTCTCATTTTCTCTCTAATGGAAGGTAC
CCTTTTCCCAAACAGGCCTTCATTCCCAATTCCAAGGACAAAATCAACTCAACCCAACCA
CCCCCATGTGAAATTCAACCCTGCAACTCTTCCTCTCCCTCCCCAATCCCCATCTCCTCC
TTCTCTGCCATTGGACTCTCTCCTTCAGCATCTGCTTCACTTCTCTTCACCTACCCACAA
GCCCAAACCCATCAACCCACCTAAAACCAATTTGAAGAAATTCAGTGCTGTTTCAGTGTC
ACAGTTGGAGGGCAGTGTAGAGGAGGCTCAATCACCAGATGGGTCTGTAGAATTCTTGTC
AAGGAAGGGTAAGTTTCTGCTGAATTCCATTGTGGAACACCCTTTACCTGGTTTGAATGA
TTTCTTTGATTCTGTGAAGTTTGAGTTGCTTGATGTTGATTTGGTTAGTCTCTTGAAGGG
GTTAGATCTTTCGGGCAATTGGAAAAGAGCTGTTTTGTTGTTTAAATGGGCTATTTTGAA
TTTATACTCTAGAAATGAGAAGATAGATAATCAGCTTGTTGAACTGATGGTTAGGATTCT
TGGGAGGGAGTCTCAGCATTCGGTTGCATTGAGGCTGCTTGATGAAATTTCTGTTGAGGA
ATATTCACTGGATGTCCGAGCCTGGACTACCATTCTTCATGCATATTCTCGTATTGGCAA
GTATGAGAGAGCGATTACTATGTTTGAGAAAATGAGGAAGACGGGCCTATCTCCAACTCT
GGTCACCTATAATGTCATGCTTGATGTTTATGGGAAGATGGGTAGGTCTTGGAATAAAAT
TTTAGGCCTCTTGGATGAGATGAGAAGCAATGGACTTGAGTTTGATGAGTTCACTTGCAG
CACTGTGATATCTGCTTGTGGGAGAGAGGGGCTGTTGGATGAAGCCAGGAAGTTCTTTGC
CAGATTGAAGTCAGAGGGTTATGTTGCGGGAACTTTTACTTACAATTCTTTGTTGCAGGT
GTTTGGGAAGGCCGGGATTTACTCAGAGGCTTTGAGTATTTTGAAAGAGATGGAGAAAAA
TAACTGCCCACCTGACTTGGTGACTTACAATGAGCTTGTGGCAGCTTATGTAAGAGCAGG
ATTCCATGAGGAAGGAGCTGACTTCATAGATACAATGATCCGTAAGGGAATAATGCCAAA
TGCCATCACATATACTACTGTCATAAATGCCTATGGCAAAGCTGGAAAGGAGGACAAGGC
CTTGAGTTTCTTCAGGCAGATGAAGGAATCGGGTTGTGTTCCTAATGTGTGTACATATAA
TGCCATCCTTGGTATGTTGGGGAAGAAGTCACGGTTAGAAGAGATGATAGATATGCTTTG
TGATATGAGATCAAATGGATGTGCCCCTAACTCAGTTACCTGGAATACAATGCTTGCCAT
GTGTGGAAATAAGGGTATGCACAAGTATGTGAACCGGGTATTCCGTGAGATGAAGAGTTG
TGGTTTTGAGCCTAACAGAGACACATTTAATGCTTTGATTGGTGCATATGGCCGATGTGG
GTCCCAAATTGATGTCGTCAAAATGTATGAGGAAATGATTAAAGCTGGGTTTACTCCATG
TGTTACAACTTACAATGCACTTCTGAATGCACTTGCTCGGCGAGGGGATTGGGAAGCAGC
AGAGTCTGTGATTCTAGACATGAAGAGCAAGGGATTTAAGCCTAATGAAACCTCATACTC
ATTGATGCTCAATTGTTATGCAAAGGGAGGGAACGGGAGGGGAATAGAGAAGATTGAGGA
AGAAATTTATAATGGACATATTTTTCCCAGCTGGATACTTTTGAGAACCCTAGTTCTTGC
AAACTTCAAGCGTAGAGCACTGATGGGCATGGAGAGAGCATTTCAAGAATTTTGCAAGCA
TGGATACAAACCTGATTTGGTTTTGTTTAACTCAATGCTTTCGATTTTTGCCAAGAACAA
GATGTATGATCGTGCCCATGAGATGCTGCGGTTGATACGTGAGAGTGGATTGCAGCCTGA
TCTAGTCACATACAATAGCTTGATGGACATGTATGCCAGAGGGGGAGAGTGTTGGAAAGG
AGAAGAAATCCTCAAAGGGATACAAAAATCTGGCGGAAAACCGGACCTTGTTTCTTATAA
CACTGTAATCAAAGGATTTTGTAGGCAAGGGCTCATGCAGGAGGCAATAAGAACTCTCTC
AGAGATGACAATTAGTGGGATCCGACCTTGTATAGTCACTTACAATACTTTTGTAGCAGG
CTATTCAGGGAAAGGAATGTTTAGTGAAGTTGAAGAGGTGATCAGTTATATGATTCAGCA
TGATTGCAGACCCAATGAGCTAACCTATAAGATTGTGGTGGATGGTTATTGTAAAGGCAA
AAAATACAAAGAAGCTATGGATTTTGTGTCAAATATTACAGAGATGGATAAGTCCTTCGA
TGATCAATCATTGCGAAGGCTCACTTTCCGTATTAGGGAGCATATGGAATTATGATTTTG
TAAATTATCTCTTTTGGATATTCATCGTTAGTTGCTTGGGCTTTTTGGGCACATATCACT
GTCAAAAAATTGTTTTAGCACTCACTGATTCATTTGTAATTTTCTCAGGTGAGTCTCCAA
TTCCTAAAGATATTATATGAATTTTGATCACAAGAAAAGATATGGGCACACATTTTATTG
ATGTTGTTACTT