Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00510.t01
CDS Infomation

cds chromosome:12X:11:17904992:17906883:-1 gene:VIT_11s0052g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGCTTGACCGAATCAGGCACCTGGCCTCCTGCGACAAATCCACCAGAGACGAAGCC
CTCCGCCTCCTGCATACATGGCTCCCTTCCCAATCCCAAGTCTCCGAAGAAGACATGAAG
AAAGTCTGGAAAGGCCTCTTCTATTCCCTCTGGCACGCCGACAAAACGCCAGTTCAATCC
GACCTCATCGACCGCCTCGCTTCTCTCCTCACCACTCTCAACTTGCCCCTTTCAATTCAT
TATTTTTCCGTCTTCCTCCTCACCATGCGCCGTGAGTGGCCCGGTATCGACGCTCTCAGG
TTAGATAAGTTTTATCTCTTGATTCGGAAATTTATGTACAATTTTTTTCTTGTTTTGAAG
AATAATTCGTGGGATTTGGAGATCTCGAAGAGATTAATTGTGGTATTGGAGTTGGAGGAT
GGGAGATTCAGTGGGAATGGTGTTGGGTATCATGTTGCTTCTGTTTTTCTTGAGGAGCTG
AGGCCGTTTTTGCCGGTACGGAGAGAGATTGTGAGTGTTTTGTTTGAGCCTTTTGTTGAG
GTTATGGGGAGGTCAGCGGATAAGGTGTTGGTGGGGAAGGTGAAGTCGAATGTGTTTGAT
TTTTTGGTGAGGATGGGTCAGAGATTGTTGGAGGTGAAGAGGTTGGGTGGGGATGAGGGT
GGAGATGGGGATGCAGTGGCGTTTGGAACTTTAGCGGTGGGATTTGGGTTTTCAAAGAAG
TTCTATGAGTTGGGTTCTGCCCCTGATTGCCTTCAGGGGAATAGGAAAGTCCTTTTTGGT
TTGCATGAGGGTTTTGCAAAGTTGGAGAAGGATTTTGCATCGGCACGTATTGAAATTTCT
ATTCCTGAGGATGATAATTGTGATGAAGATGAACTACCGACTTTGATCCCGATTGCCCAA
CCTGAGGCGGAAGTGGAAGGTGCTTCTGAAGTTGTTGAAAGTGTTGGTAATGGCTCTGCT
CGGAAGGCCTCGAAGAAAAGCAAGAAGCTTAAGAAAGTGTCTGGTGGAAGTGATAAGAAG
AATAAAATGAAGAAAAAAAAAAGTCCTGATCTTGTTTCAGAAAACAGTGCTACAGTTGAG
TACAATGAAAATGTAACTGTCCCAAACGATGAGAACTCAAACTGTGAACCTTCAAGTGAT
CAGAGTTTGATAGACTTCAATGAATCTGTGATTTCAAACCTACAGATGCAGTTTGAGAAG
GTTGCTGCTGAAGTTGGTCTGGGTAATGAGTTAATGGGTTTGTGTGATTCCCCTACAAGG
CCGGTTAATGGTACTGTCTCCAAGAAGAGAAAGAGAGCTAAGAATAACAATGAACATGAT
GTAAGTAGCCAAGGAGATGATGAAAGCAGTGCTCTTGCAAAGAGTAAAGGGAAGAGTGCC
AAGAAGGTAAAGTTTTCCATAAAAAATAACTTGGTGTGGAAGCCCCAGAGTCCTTTACCT
CCCCAAAGCTTGAGACTACCACCATCTGTGACCCCTAGAGGCAGTGCCCTCAAGAAAGGG
ATACCTCCTGGTCCTGTTAGAGAAATGCCTCAGACAAAAAAGGTCAAGAAGAGAGCCAAG
TCTCTGAAGAAAGGCCGGAATGGAATTAAGAGCATTTCCCCAGCCATAAAGCGTTTGAAG
AAGTTACAATCTCTTTCTATTTAA

Peptide Sequence

PEP ID

VIT_11s0052g00510.t01
PEP Infomation

pep chromosome:12X:11:17904992:17906883:-1 gene:VIT_11s0052g00510 transcript:VIT_11s0052g00510.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MALDRIRHLASCDKSTRDEALRLLHTWLPSQSQVSEEDMKKVWKGLFYSLWHADKTPVQS
DLIDRLASLLTTLNLPLSIHYFSVFLLTMRREWPGIDALRLDKFYLLIRKFMYNFFLVLK
NNSWDLEISKRLIVVLELEDGRFSGNGVGYHVASVFLEELRPFLPVRREIVSVLFEPFVE
VMGRSADKVLVGKVKSNVFDFLVRMGQRLLEVKRLGGDEGGDGDAVAFGTLAVGFGFSKK
FYELGSAPDCLQGNRKVLFGLHEGFAKLEKDFASARIEISIPEDDNCDEDELPTLIPIAQ
PEAEVEGASEVVESVGNGSARKASKKSKKLKKVSGGSDKKNKMKKKKSPDLVSENSATVE
YNENVTVPNDENSNCEPSSDQSLIDFNESVISNLQMQFEKVAAEVGLGNELMGLCDSPTR
PVNGTVSKKRKRAKNNNEHDVSSQGDDESSALAKSKGKSAKKVKFSIKNNLVWKPQSPLP
PQSLRLPPSVTPRGSALKKGIPPGPVREMPQTKKVKKRAKSLKKGRNGIKSISPAIKRLK
KLQSLSI

Transcript Sequence

Transcript ID

VIT_11s0052g00510.t01
Transcript Infomation

cdna chromosome:12X:11:17904992:17906883:-1 gene:VIT_11s0052g00510 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCACAACGTTCAATCCATTCATCTATGGCGCTTGACCGAATCAGGCACCTGGCCTCCTGC
GACAAATCCACCAGAGACGAAGCCCTCCGCCTCCTGCATACATGGCTCCCTTCCCAATCC
CAAGTCTCCGAAGAAGACATGAAGAAAGTCTGGAAAGGCCTCTTCTATTCCCTCTGGCAC
GCCGACAAAACGCCAGTTCAATCCGACCTCATCGACCGCCTCGCTTCTCTCCTCACCACT
CTCAACTTGCCCCTTTCAATTCATTATTTTTCCGTCTTCCTCCTCACCATGCGCCGTGAG
TGGCCCGGTATCGACGCTCTCAGGTTAGATAAGTTTTATCTCTTGATTCGGAAATTTATG
TACAATTTTTTTCTTGTTTTGAAGAATAATTCGTGGGATTTGGAGATCTCGAAGAGATTA
ATTGTGGTATTGGAGTTGGAGGATGGGAGATTCAGTGGGAATGGTGTTGGGTATCATGTT
GCTTCTGTTTTTCTTGAGGAGCTGAGGCCGTTTTTGCCGGTACGGAGAGAGATTGTGAGT
GTTTTGTTTGAGCCTTTTGTTGAGGTTATGGGGAGGTCAGCGGATAAGGTGTTGGTGGGG
AAGGTGAAGTCGAATGTGTTTGATTTTTTGGTGAGGATGGGTCAGAGATTGTTGGAGGTG
AAGAGGTTGGGTGGGGATGAGGGTGGAGATGGGGATGCAGTGGCGTTTGGAACTTTAGCG
GTGGGATTTGGGTTTTCAAAGAAGTTCTATGAGTTGGGTTCTGCCCCTGATTGCCTTCAG
GGGAATAGGAAAGTCCTTTTTGGTTTGCATGAGGGTTTTGCAAAGTTGGAGAAGGATTTT
GCATCGGCACGTATTGAAATTTCTATTCCTGAGGATGATAATTGTGATGAAGATGAACTA
CCGACTTTGATCCCGATTGCCCAACCTGAGGCGGAAGTGGAAGGTGCTTCTGAAGTTGTT
GAAAGTGTTGGTAATGGCTCTGCTCGGAAGGCCTCGAAGAAAAGCAAGAAGCTTAAGAAA
GTGTCTGGTGGAAGTGATAAGAAGAATAAAATGAAGAAAAAAAAAAGTCCTGATCTTGTT
TCAGAAAACAGTGCTACAGTTGAGTACAATGAAAATGTAACTGTCCCAAACGATGAGAAC
TCAAACTGTGAACCTTCAAGTGATCAGAGTTTGATAGACTTCAATGAATCTGTGATTTCA
AACCTACAGATGCAGTTTGAGAAGGTTGCTGCTGAAGTTGGTCTGGGTAATGAGTTAATG
GGTTTGTGTGATTCCCCTACAAGGCCGGTTAATGGTACTGTCTCCAAGAAGAGAAAGAGA
GCTAAGAATAACAATGAACATGATGTAAGTAGCCAAGGAGATGATGAAAGCAGTGCTCTT
GCAAAGAGTAAAGGGAAGAGTGCCAAGAAGGTAAAGTTTTCCATAAAAAATAACTTGGTG
TGGAAGCCCCAGAGTCCTTTACCTCCCCAAAGCTTGAGACTACCACCATCTGTGACCCCT
AGAGGCAGTGCCCTCAAGAAAGGGATACCTCCTGGTCCTGTTAGAGAAATGCCTCAGACA
AAAAAGGTCAAGAAGAGAGCCAAGTCTCTGAAGAAAGGCCGGAATGGAATTAAGAGCATT
TCCCCAGCCATAAAGCGTTTGAAGAAGTTACAATCTCTTTCTATTTAATAGGTTTTAGGT
GTTCGATTATGTTCCTTTTTTTTTGGGTTTTTTGATAGGTTGTAGGATTGTGCCTTTGTG
CATCACATCTCTTTAATATTTGGTTTTTACAGTTGAATGGTTAAAATCCCAATATGTGGT
GCTCTTCTTTCATGGCCAAGTCCTTGTTGAGTGAAATACCAAAGTTGAGTGTGATATCTA
CATTGATTTCATTGGCATGTTGAGATAAATGA