Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00420.t01
CDS Infomation

cds chromosome:12X:11:17767743:17771542:-1 gene:VIT_11s0052g00420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGGTCACCAATAAATATGTAACAGTGAAGACCCACATCGATGGATCATCACCTCAG
GAATCCGACTTTGAGCTCAAGACTGCGGCTTTAAATCTATCTGTGGAGCCGGGTTCGAAA
GATGTGATAGTGAAAAATCTCTATGTTTCCATCGATCCGTACCAGATCAATCGAATGAAG
AGAGTTTGCTCTTCGCAGAAACTTGTTAGTACTGCAGATGGCATAACTCCTGGCCAGGCC
ATTAGTGCTCATGGTCTTGGGAGAGTTGTGGCTTCTGGAAACCCTGAGTTTGAGAAGGAT
GATTTAGTTGTGGGGCTTATCAATTGGGAAGAGTATACCATCGTCAAAGGAGGTAACATC
TTGAGGAAGTTGGATCCCATGGGATTTCCTCTCTCTTACCACCTTGGAGTTCTCGGACTT
AGTGGGCTAACAGCGTATGCCGGTTTCGTCGAAGTATGTAAACCTAAGAAGGGGGAGAAA
GTGTTTGTATCAGCTGCTTGTGGATCAGTTGGAAATTTGGTGGGACAATATGCCAAGCTC
TTCGGCTGTCATGTTGTGGGCTGTGCTGGAACAAAACAAAAGGTTGAGTTGCTAAAAGGG
AAGCTTGGTTTTGATGACGCATTCAACTACAAGGAGGAAACCGATCTAAAGTCTACTCTC
AAAAGATACTTCCCTGATGGGATGGATATATATTTTGATAACGTGGGAGGCAAGATGTTG
GAAGCATCGGTGGCTAACATGAATCCCTTTGGTAGAATTGCTGTTTGTGGAATAATCTCG
GAATATACAGGGATTGGAGAGCGAGCTGCACCAGATATGATTGATATTGTGTACAAGAGA
CTCAAGATCCAAGGGTTCTTGGTGATTGATTACTTGAAGGGGATGGATGATTTCATTTCA
ACAATGTCGAACCACCTCAGCACTGGCAAAATTCATGTACTTGAAGATATATCCCAGGGT
GTGGAGAGTATTTCATCTGCTTTCGTAGGACTCTTTCAGGGAGATAATGTTGGGAAAAGG
TGGTGA

Peptide Sequence

PEP ID

VIT_11s0052g00420.t01
PEP Infomation

pep chromosome:12X:11:17767743:17771542:-1 gene:VIT_11s0052g00420 transcript:VIT_11s0052g00420.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEVTNKYVTVKTHIDGSSPQESDFELKTAALNLSVEPGSKDVIVKNLYVSIDPYQINRMK
RVCSSQKLVSTADGITPGQAISAHGLGRVVASGNPEFEKDDLVVGLINWEEYTIVKGGNI
LRKLDPMGFPLSYHLGVLGLSGLTAYAGFVEVCKPKKGEKVFVSAACGSVGNLVGQYAKL
FGCHVVGCAGTKQKVELLKGKLGFDDAFNYKEETDLKSTLKRYFPDGMDIYFDNVGGKML
EASVANMNPFGRIAVCGIISEYTGIGERAAPDMIDIVYKRLKIQGFLVIDYLKGMDDFIS
TMSNHLSTGKIHVLEDISQGVESISSAFVGLFQGDNVGKRW

Transcript Sequence

Transcript ID

VIT_11s0052g00420.t01
Transcript Infomation

cdna chromosome:12X:11:17767743:17771542:-1 gene:VIT_11s0052g00420 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TGCCCTATCCTCTTCTTTCATCGAGTGAGCTTCCGTCAACAAACCAGAAAGGGTAGACAA
CAATGGAGGTCACCAATAAATATGTAACAGTGAAGACCCACATCGATGGATCATCACCTC
AGGAATCCGACTTTGAGCTCAAGACTGCGGCTTTAAATCTATCTGTGGAGCCGGGTTCGA
AAGATGTGATAGTGAAAAATCTCTATGTTTCCATCGATCCGTACCAGATCAATCGAATGA
AGAGAGTTTGCTCTTCGCAGAAACTTGTTAGTACTGCAGATGGCATAACTCCTGGCCAGG
CCATTAGTGCTCATGGTCTTGGGAGAGTTGTGGCTTCTGGAAACCCTGAGTTTGAGAAGG
ATGATTTAGTTGTGGGGCTTATCAATTGGGAAGAGTATACCATCGTCAAAGGAGGTAACA
TCTTGAGGAAGTTGGATCCCATGGGATTTCCTCTCTCTTACCACCTTGGAGTTCTCGGAC
TTAGTGGGCTAACAGCGTATGCCGGTTTCGTCGAAGTATGTAAACCTAAGAAGGGGGAGA
AAGTGTTTGTATCAGCTGCTTGTGGATCAGTTGGAAATTTGGTGGGACAATATGCCAAGC
TCTTCGGCTGTCATGTTGTGGGCTGTGCTGGAACAAAACAAAAGGTTGAGTTGCTAAAAG
GGAAGCTTGGTTTTGATGACGCATTCAACTACAAGGAGGAAACCGATCTAAAGTCTACTC
TCAAAAGATACTTCCCTGATGGGATGGATATATATTTTGATAACGTGGGAGGCAAGATGT
TGGAAGCATCGGTGGCTAACATGAATCCCTTTGGTAGAATTGCTGTTTGTGGAATAATCT
CGGAATATACAGGGATTGGAGAGCGAGCTGCACCAGATATGATTGATATTGTGTACAAGA
GACTCAAGATCCAAGGGTTCTTGGTGATTGATTACTTGAAGGGGATGGATGATTTCATTT
CAACAATGTCGAACCACCTCAGCACTGGCAAAATTCATGTACTTGAAGATATATCCCAGG
GTGTGGAGAGTATTTCATCTGCTTTCGTAGGACTCTTTCAGGGAGATAATGTTGGGAAAA
GGTGGTGAAAGTTGCTGATGAATAAATGCCGACAGAAGACTATTGGATTTTGCTTAAAAA
AGGTAGAAAAGTTAAGACAAGATATATTCCTACTTTAATTTTCTTTTCTCAACTTTTTCA
TAGATAAACCAAATAAAAGGATCGACACACTTCTGATTCTCATATTCACACAAAAA