Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00330.t01
CDS Infomation

cds chromosome:12X:11:17640339:17648021:-1 gene:VIT_11s0052g00330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGGGCGTTGACACGCAATCAGCAAGAAAGCGTGCGCAGAATTTGTCGGACAAAGGC
TCGTCCATCAACATGGCAATCATTTTCAACGTACCACTCTCCTCATCATCATCGTCAAGA
TCTAAATTCAACTCCAGAAATTCCCACATTCTCTTCCAGAAACGGTGTCCTTTTCCGAAT
CGGACAATCGTTAACTCCTCCTCTGCGGCTGGAAAAGCTCCGACGCTGCTCCACAAATTC
AACCCTAGGATCCCCGTCGAACAAGCCCTAACTCCACCCAGCTCCTGGTACACCGACCCC
TCATTTCTTGCCCTTGAACTCGACCGCGTCTTCTACAGAGGCTGGCAAGCTGTTGGATAT
ACTGAACAGATAAAAAATCCCCGGGACTTTTTCACTGGCAGGTTGGGGAATGTTGAATTT
GTGGTATGTCGAGATAACAATGGCAAGCTTCATGCTTTTCACAATGTGTGTCGACATCAT
GCCTCTCTTCTTGCATATGGAAGTGGGCAAAAGTCTTGCTTTGTATGCCCATATCATGCC
TGGACATATGGGCTAGATGGAGCCCTCCTCAAGGCAACCAGAATAACAGGAATAAAGGAC
TTCAGTATAAATGAATTTGGGCTTATACCTTTGCGCATTGCCACTTGGGGGCCATTTGTT
CTTCTCAATATAAACAATGACGTTTCACCTCAGCACGAAGCTGATAGCAAAATAGTGGGG
AAGGAATGGCTTGGCAGCTCTTCAGACATTCTGAGTAATGGTGGAATTGATACTTCACTG
AGTTATGTTTGTAGACGTGAATATACCATTGAATGTAACTGGAAGGTGTTCTGTGACAAC
TACTTAGATGGTGGCTATCATGTGCCATATGCACATAAAGGTCTTGCTTCTGGCCTTAAG
CTTGAGTCCTACTCCACAACAACGTTTGAAAGGGTTAGCATCCAAAGTTGTGAAGGTGGT
CCTGGGGAAAGTGAAGATGATTTTGATCGACTTGGAACAAAAGCTCTATATGCTTTCATC
TATCCAAATTTCATGATTAATAGGTATGGTCCTTGGATGGACACCAACCTGGTTCTCCCA
CTTGGACCCAGGACATGCAAAGTGGTATTTGATTACTTTCTTGAAGCTTCCCTTAAGGAT
GACAAAGCTTTCATAGAAAGAAGTCTAGAAGATAGTGAAAGAGTACAGATGGAAGATATC
ATACTATGTGAAGGCGTCCAGAGGGGCCTCGAGTCACCAGCGTATTGCAGTGGCAGGTAC
GCTCCTACTGTCGAGATGGCCATGCACCATTTCCATTGCCTGCTTCATGAGAACCTAACT
AAATGA

Peptide Sequence

PEP ID

VIT_11s0052g00330.t01
PEP Infomation

pep chromosome:12X:11:17640339:17648021:-1 gene:VIT_11s0052g00330 transcript:VIT_11s0052g00330.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKGVDTQSARKRAQNLSDKGSSINMAIIFNVPLSSSSSSRSKFNSRNSHILFQKRCPFPN
RTIVNSSSAAGKAPTLLHKFNPRIPVEQALTPPSSWYTDPSFLALELDRVFYRGWQAVGY
TEQIKNPRDFFTGRLGNVEFVVCRDNNGKLHAFHNVCRHHASLLAYGSGQKSCFVCPYHA
WTYGLDGALLKATRITGIKDFSINEFGLIPLRIATWGPFVLLNINNDVSPQHEADSKIVG
KEWLGSSSDILSNGGIDTSLSYVCRREYTIECNWKVFCDNYLDGGYHVPYAHKGLASGLK
LESYSTTTFERVSIQSCEGGPGESEDDFDRLGTKALYAFIYPNFMINRYGPWMDTNLVLP
LGPRTCKVVFDYFLEASLKDDKAFIERSLEDSERVQMEDIILCEGVQRGLESPAYCSGRY
APTVEMAMHHFHCLLHENLTK

Transcript Sequence

Transcript ID

VIT_11s0052g00330.t01
Transcript Infomation

cdna chromosome:12X:11:17640339:17648021:-1 gene:VIT_11s0052g00330 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAGAAATATGAAGGGCGTTGACACGCAATCAGCAAGAAAGCGTGCGCAGAATTTGTCGGA
CAAAGGCTCGTCCATCAACATGGCAATCATTTTCAACGTACCACTCTCCTCATCATCATC
GTCAAGATCTAAATTCAACTCCAGAAATTCCCACATTCTCTTCCAGAAACGGTGTCCTTT
TCCGAATCGGACAATCGTTAACTCCTCCTCTGCGGCTGGAAAAGCTCCGACGCTGCTCCA
CAAATTCAACCCTAGGATCCCCGTCGAACAAGCCCTAACTCCACCCAGCTCCTGGTACAC
CGACCCCTCATTTCTTGCCCTTGAACTCGACCGCGTCTTCTACAGAGGCTGGCAAGCTGT
TGGATATACTGAACAGATAAAAAATCCCCGGGACTTTTTCACTGGCAGGTTGGGGAATGT
TGAATTTGTGGTATGTCGAGATAACAATGGCAAGCTTCATGCTTTTCACAATGTGTGTCG
ACATCATGCCTCTCTTCTTGCATATGGAAGTGGGCAAAAGTCTTGCTTTGTATGCCCATA
TCATGCCTGGACATATGGGCTAGATGGAGCCCTCCTCAAGGCAACCAGAATAACAGGAAT
AAAGGACTTCAGTATAAATGAATTTGGGCTTATACCTTTGCGCATTGCCACTTGGGGGCC
ATTTGTTCTTCTCAATATAAACAATGACGTTTCACCTCAGCACGAAGCTGATAGCAAAAT
AGTGGGGAAGGAATGGCTTGGCAGCTCTTCAGACATTCTGAGTAATGGTGGAATTGATAC
TTCACTGAGTTATGTTTGTAGACGTGAATATACCATTGAATGTAACTGGAAGGTGTTCTG
TGACAACTACTTAGATGGTGGCTATCATGTGCCATATGCACATAAAGGTCTTGCTTCTGG
CCTTAAGCTTGAGTCCTACTCCACAACAACGTTTGAAAGGGTTAGCATCCAAAGTTGTGA
AGGTGGTCCTGGGGAAAGTGAAGATGATTTTGATCGACTTGGAACAAAAGCTCTATATGC
TTTCATCTATCCAAATTTCATGATTAATAGGTATGGTCCTTGGATGGACACCAACCTGGT
TCTCCCACTTGGACCCAGGACATGCAAAGTGGTATTTGATTACTTTCTTGAAGCTTCCCT
TAAGGATGACAAAGCTTTCATAGAAAGAAGTCTAGAAGATAGTGAAAGAGTACAGATGGA
AGATATCATACTATGTGAAGGCGTCCAGAGGGGCCTCGAGTCACCAGCGTATTGCAGTGG
CAGGTACGCTCCTACTGTCGAGATGGCCATGCACCATTTCCATTGCCTGCTTCATGAGAA
CCTAACTAAATGATTTTCTCTTATGTTCTAGTTTGAAATTTCTTGAAGTTCCATTGTGTG
TTCCGTACAAAAACTCTTTTTAACTTTGCTCACCATCAAGCTTAATATTTCATATAATAA
CGGTGAACACA