Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00240.t01
CDS Infomation

cds chromosome:12X:11:17410515:17415382:-1 gene:VIT_11s0052g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAGGAAACGGGAGAAGCTACTCACAAGGATGACAGACTTCATAAAAGAGGTGGCA
GATTGTGTGAATTCTCCCAACCCAAGCGTAGAGGTCCATCGTCTTGTTCGCTATTGTCGC
ATTGGCTCCACTTTTGTAGGGTACCTCGGCCTTCCTTTCAAGTTTGCTCAGATGGAATTC
TTATCCAAGGTTAATGATCTTGACAAGGGGGCAAGGCCCGATGACACACTAGAAACCTTA
ATTGACCGAGAAATCCAGCAGAATTTAGCTAAGAAGCCTTATAGTGGCTCAAGGAGCCTG
ATCAGAGTCAAGCGTTCGATCGTGATGCTAACCGTGATGTTTGAGCAAATGCTAACCAAA
GGAGGGAACTCAATTGTGGATGCGGTTTCAAAGTCATACGAAAAGTCCTTTGCTGCATAC
CATGGATGGGCTACCAGAACTGCCGTCCTTGCTTCGCTTCCTGCCCTTCCTACAAGGGCC
AAGCTTATGAAGAAGTTGCACGAAAATGTGAACTACATCGACAGTTTATTTCATTCAAGG
GAATTGGGCCAACAACTGAAACGGGAGAAGCTACTCACAAGGATGGCAGACTGCATAAAA
GAGGTGGCAGATTGTGTGAATTCCCCCAACCCAAGCCTAGAGGTCCATCGTCTTGTTCAC
TATTGTCGCATTGGCTCCACTTTTGTAGGGTACCTCGGCCTTCCTTTCAAGTTTGCTCAG
ATGGAATTCTTATCCAAGGTTAATGATCTTGACAAGGGGGCAAGGCCCGATGACACACTA
GAAACCTTAATTGACCGAGAAATCCAGCAGAATTTAGCTAAGAAGCATTATAGTAGCTCA
AGGAGCCTGATCAGAGTCAAGCGTTCGATCGTGATGCTAACCGTGATGTTTGAGCAAATG
CTAACCAAAGGAGGGAACTCAATTGTGGGTGCGGTTTCAAAGTCATACGAGAAGTCCTTC
GCTGCATACCATGGATGGGCTACCAGAACTGCCGTCTTTGCTTCGCTTCCTGCCCTTCCT
ACAAGGGCCAAGCTTATGAAGAAGTTGCACGAAAATGAGGTGTCGATGACTGCTAAGATG
AAAAGCTTTGTAGATTCATCAGCTGTAATAGTGAACTACATCGACAGTTTATTTCATTCA
AGGGAATTGGGCCAACAGCTGCTTGAATTGATTTGA

Peptide Sequence

PEP ID

VIT_11s0052g00240.t01
PEP Infomation

pep chromosome:12X:11:17410515:17415382:-1 gene:VIT_11s0052g00240 transcript:VIT_11s0052g00240.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MERKREKLLTRMTDFIKEVADCVNSPNPSVEVHRLVRYCRIGSTFVGYLGLPFKFAQMEF
LSKVNDLDKGARPDDTLETLIDREIQQNLAKKPYSGSRSLIRVKRSIVMLTVMFEQMLTK
GGNSIVDAVSKSYEKSFAAYHGWATRTAVLASLPALPTRAKLMKKLHENVNYIDSLFHSR
ELGQQLKREKLLTRMADCIKEVADCVNSPNPSLEVHRLVHYCRIGSTFVGYLGLPFKFAQ
MEFLSKVNDLDKGARPDDTLETLIDREIQQNLAKKHYSSSRSLIRVKRSIVMLTVMFEQM
LTKGGNSIVGAVSKSYEKSFAAYHGWATRTAVFASLPALPTRAKLMKKLHENEVSMTAKM
KSFVDSSAVIVNYIDSLFHSRELGQQLLELI

Transcript Sequence

Transcript ID

VIT_11s0052g00240.t01
Transcript Infomation

cdna chromosome:12X:11:17410515:17415382:-1 gene:VIT_11s0052g00240 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

AGAGTACTGCAATCGAAGTAATAGTAGTGTTGGGTAAGCTCAGGAGCAGCTCTGTTAATT
GGCTTCAATGGAGAGGAAACGGGAGAAGCTACTCACAAGGATGACAGACTTCATAAAAGA
GGTGGCAGATTGTGTGAATTCTCCCAACCCAAGCGTAGAGGTCCATCGTCTTGTTCGCTA
TTGTCGCATTGGCTCCACTTTTGTAGGGTACCTCGGCCTTCCTTTCAAGTTTGCTCAGAT
GGAATTCTTATCCAAGGTTAATGATCTTGACAAGGGGGCAAGGCCCGATGACACACTAGA
AACCTTAATTGACCGAGAAATCCAGCAGAATTTAGCTAAGAAGCCTTATAGTGGCTCAAG
GAGCCTGATCAGAGTCAAGCGTTCGATCGTGATGCTAACCGTGATGTTTGAGCAAATGCT
AACCAAAGGAGGGAACTCAATTGTGGATGCGGTTTCAAAGTCATACGAAAAGTCCTTTGC
TGCATACCATGGATGGGCTACCAGAACTGCCGTCCTTGCTTCGCTTCCTGCCCTTCCTAC
AAGGGCCAAGCTTATGAAGAAGTTGCACGAAAATGTGAACTACATCGACAGTTTATTTCA
TTCAAGGGAATTGGGCCAACAACTGAAACGGGAGAAGCTACTCACAAGGATGGCAGACTG
CATAAAAGAGGTGGCAGATTGTGTGAATTCCCCCAACCCAAGCCTAGAGGTCCATCGTCT
TGTTCACTATTGTCGCATTGGCTCCACTTTTGTAGGGTACCTCGGCCTTCCTTTCAAGTT
TGCTCAGATGGAATTCTTATCCAAGGTTAATGATCTTGACAAGGGGGCAAGGCCCGATGA
CACACTAGAAACCTTAATTGACCGAGAAATCCAGCAGAATTTAGCTAAGAAGCATTATAG
TAGCTCAAGGAGCCTGATCAGAGTCAAGCGTTCGATCGTGATGCTAACCGTGATGTTTGA
GCAAATGCTAACCAAAGGAGGGAACTCAATTGTGGGTGCGGTTTCAAAGTCATACGAGAA
GTCCTTCGCTGCATACCATGGATGGGCTACCAGAACTGCCGTCTTTGCTTCGCTTCCTGC
CCTTCCTACAAGGGCCAAGCTTATGAAGAAGTTGCACGAAAATGAGGTGTCGATGACTGC
TAAGATGAAAAGCTTTGTAGATTCATCAGCTGTAATAGTGAACTACATCGACAGTTTATT
TCATTCAAGGGAATTGGGCCAACAGCTGCTTGAATTGATTTGATTTGATCTTTGACTACA
TGCAATAATTTATCATTGTACAAGGTTGTAGTGCTTTTTCATGTTTCGATTCTTTTACTA
TGAA