Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00170.t01
CDS Infomation

cds chromosome:12X:11:17240445:17291046:-1 gene:VIT_11s0052g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGGTTTTCGTTCTGGAGATCCAGAGATCGGTTCTCCTTGGACGAACTCAGACACTTG
ACTTATCAGCTGATGAAAATTCAAATTGTTAATGAGGTCAACAAGGATTTTGTTGTTGAG
GCGCTGAGGTCAATTGCGGAGTTGATAACATATGGTGACCAGCATGACCCAGCCTTTTTT
GAGTTTTTCATGGAGAAGCAGGTCATGGGGGAGTTTGTACGTATATTAAAAATAAGTAGA
AGTGTGACTGTTTCACTTCAGTTGCTGCAGACGATGAGTATTATGATCCAGAACTTAAAA
AGTGAACATGCTATATACTACATGTTCAGCAATGAGCATATTAACTACCTTATAACTTAT
ACCTTTGACTTCCGCAATGAAGAGCTATTATCCTACTACATATCCTTCTTAAGAGCAATA
AGTGGAAAGCTGAACAAGAATACAATTTCTTTGCTTGTGAAGACTCGAAATGATGAAGTA
GTTTCTTTCCCACTGTATGTTGAGGCAATACGGTATGCCTTCCATGAAGAGAACATGGTC
CGCACTGCAATACGTGCTTTGACACTAAATGTTTATCATGTTGGAGATGAATCTGTAAAT
AGATATGTTACTACCACACCTCATGCGGCTTTTTTTTCGAACCTGGTTACATTTTTCCGG
AAGCAGTGCATCAATTTAAATGGATTGGTCTCTGATGCTTCAAAGAATCCAGGTCCAGAA
TCGACCTCTAGTATACTTGTTGCTGTAGATGAAATTGAGGACAATCTTTACTATTTTAGT
GATGTTATTTCTGCTGGGATTCCTGATGTTGGGAGGTTAATAACAGACAACATTTTGCAG
CATTTGATATTTCCATTGCTTCTTCCTTCTCTAAGGATGGAAGCTGTAAATGAGATGCAG
ATCAGTGCTGTCACTTCTCTGTATTTACTTTGTTGCATCTTGCGCATAGTTAAAATCAAA
GATCTGGCAAATACTGTTGCTGCTTCTCTTTTTTGTCCATTAGAGGCTTTTATAAAAATT
TCTGAGACTAAACTCAATGGCTATATATCTGGTCATGGTTTTACTCACGAAAGAGAACAG
TCAGACAGTGATAATCTTGATACAAAGGTGGAGTCTGGAAGTTTAAGAGTTACCACATCA
AACTTGCCTGGTTCTTCACAAAGTCATCAAGAAGATGTTGCCTTGCAGCGTAGTTGTAGT
GGTGCAAGTTTGGCTTTAAGGGAGGTCTTGCTTTCTTATGTCAATAATGGGGATGATATG
CTAGTTTTGGGTTCTTTGAGTGTGATAGCAACTTTATTGCAAACAAAAGAACTGGATGAA
TCGATGCTAGATGCACTTGGAATTCTTCCACAGCGCAAACAACATAAGAAACTGCTGCTG
CAATCTTTGGTTGGTGAGGGCTCAGATGAAGAGCAACTTTTTTCTCCAGAAAGTAGCTTG
ATAAGAGATGGTTTCAATAGTGAGCTTGATAGCTATCTACTAAAGCTCAAGGAGCAGTAT
GGAGTGTTGTGTTCTTGTCCTGAAGTGGCAGCAAGTCCTCGTGTACATAGGTTTCAGGTG
CTCGACGCTTTGGTCAACCTTTTTTGCCGCTCAAATATTTCTGCAGAGACCTTGTGGGAT
GGTGGTTGGGCTCTGCGCCAATTACTTCCTTATAATGAGTCTGAGTTTAACAGTAATCAC
CTTGAATTGCTCAAAGACTCGTACAGGAACTGCATTGGCACTCTCTTGCGGGAGGTTAAA
GGTTTCTGGCTAGATCTACTTATCACAGTTCTTTGTGATGAGTGGAGGAAGTGCAAAAGA
GCAATTGAGGCTTCATCCCCTCGGAGAGAGCCTAAATATGTGCTATTGCCATTACAAAAG
TCCTCTTTTGAAGAGGTTATTCCAGTTGAATCATCAATTGTTGCTGGTGAAAGAATGTGT
GAGTTGGTGAAGGTTTTTGTGCTTCTTCATCAACTTCAAATTTTCTCCCTTGGTAGAGCT
TTGCCTGATCAACCGCCTATCCTTCCTCCAATTGATGTTCCCCAATCCTTCCGAGCAAAA
GCTGCTGGCCTGGGTATCTTAGGTCCAAAGCCGGGAACCGAGTTAAGACTTGTTGATGCA
GTGCCCTGCAGAATTTCATTTGAGAGGGGTAAAGAGCGGCATTTTCGCTTTCTAGCAGTT
TCCATGGAAACATCTGGGTGGGTTCTCCTTGCAGAAGAATTACCCCTAAAACAGCATTAT
GGAGTTGTTCGTGTTACTGCCCCTTTGGCTGGCTCAAATCCTAAAATTGATGATAAGCAT
GCTAGATGGTTACACCTGCGGATCCGTCCATCCACTCTGCCCTTTTGGGATTCGGATAAA
CGCACTACCTATGCCAAAGTGAACAAAAAAGCTTTGGTTGATGGCAGATGGACCCTGGCA
TTCAGTGATGAATACTCTTGCAAGTCTGCATTGTCTATGATTCTCGAGGAGATTAATCTA
CAAAGTAATGAAGTGGAGAGAAGAATAAGACCATTACTTGACCTTGAAAGAGAAGTAAAT
TTTTCAAGCCCTTCTCCATGCCCTCTTGAGGCTTCCTCTTCAAGTACAACACCTTCCAAT
TCTTTGTAA

Peptide Sequence

PEP ID

VIT_11s0052g00170.t01
PEP Infomation

pep chromosome:12X:11:17240445:17291046:-1 gene:VIT_11s0052g00170 transcript:VIT_11s0052g00170.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MWFSFWRSRDRFSLDELRHLTYQLMKIQIVNEVNKDFVVEALRSIAELITYGDQHDPAFF
EFFMEKQVMGEFVRILKISRSVTVSLQLLQTMSIMIQNLKSEHAIYYMFSNEHINYLITY
TFDFRNEELLSYYISFLRAISGKLNKNTISLLVKTRNDEVVSFPLYVEAIRYAFHEENMV
RTAIRALTLNVYHVGDESVNRYVTTTPHAAFFSNLVTFFRKQCINLNGLVSDASKNPGPE
STSSILVAVDEIEDNLYYFSDVISAGIPDVGRLITDNILQHLIFPLLLPSLRMEAVNEMQ
ISAVTSLYLLCCILRIVKIKDLANTVAASLFCPLEAFIKISETKLNGYISGHGFTHEREQ
SDSDNLDTKVESGSLRVTTSNLPGSSQSHQEDVALQRSCSGASLALREVLLSYVNNGDDM
LVLGSLSVIATLLQTKELDESMLDALGILPQRKQHKKLLLQSLVGEGSDEEQLFSPESSL
IRDGFNSELDSYLLKLKEQYGVLCSCPEVAASPRVHRFQVLDALVNLFCRSNISAETLWD
GGWALRQLLPYNESEFNSNHLELLKDSYRNCIGTLLREVKGFWLDLLITVLCDEWRKCKR
AIEASSPRREPKYVLLPLQKSSFEEVIPVESSIVAGERMCELVKVFVLLHQLQIFSLGRA
LPDQPPILPPIDVPQSFRAKAAGLGILGPKPGTELRLVDAVPCRISFERGKERHFRFLAV
SMETSGWVLLAEELPLKQHYGVVRVTAPLAGSNPKIDDKHARWLHLRIRPSTLPFWDSDK
RTTYAKVNKKALVDGRWTLAFSDEYSCKSALSMILEEINLQSNEVERRIRPLLDLEREVN
FSSPSPCPLEASSSSTTPSNSL

Transcript Sequence

Transcript ID

VIT_11s0052g00170.t01
Transcript Infomation

cdna chromosome:12X:11:17240445:17291046:-1 gene:VIT_11s0052g00170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CCCACCAAACCCTAATTCACAAGGTTCTCTGCAGAACTCATTCTTATCAAAAGATAATAA
CGCGACACAGAAAATCGGTTTCGGAGTTCCAAGGGGGAGGAATTCTGGTGTTTTTCGTGA
GAATGACTTTTGATTAGAAGCAGGTCTTTTCGTTTGGAAGAATAATGAGTTCTAGCGTGA
ACTGAGAATGAGTTTTGAATTGGAGAAGGTCTGATCGCCAATCATGTGGTTTTCGTTCTG
GAGATCCAGAGATCGGTTCTCCTTGGACGAACTCAGACACTTGACTTATCAGCTGATGAA
AATTCAAATTGTTAATGAGGTCAACAAGGATTTTGTTGTTGAGGCGCTGAGGTCAATTGC
GGAGTTGATAACATATGGTGACCAGCATGACCCAGCCTTTTTTGAGTTTTTCATGGAGAA
GCAGGTCATGGGGGAGTTTGTACGTATATTAAAAATAAGTAGAAGTGTGACTGTTTCACT
TCAGTTGCTGCAGACGATGAGTATTATGATCCAGAACTTAAAAAGTGAACATGCTATATA
CTACATGTTCAGCAATGAGCATATTAACTACCTTATAACTTATACCTTTGACTTCCGCAA
TGAAGAGCTATTATCCTACTACATATCCTTCTTAAGAGCAATAAGTGGAAAGCTGAACAA
GAATACAATTTCTTTGCTTGTGAAGACTCGAAATGATGAAGTAGTTTCTTTCCCACTGTA
TGTTGAGGCAATACGGTATGCCTTCCATGAAGAGAACATGGTCCGCACTGCAATACGTGC
TTTGACACTAAATGTTTATCATGTTGGAGATGAATCTGTAAATAGATATGTTACTACCAC
ACCTCATGCGGCTTTTTTTTCGAACCTGGTTACATTTTTCCGGAAGCAGTGCATCAATTT
AAATGGATTGGTCTCTGATGCTTCAAAGAATCCAGGTCCAGAATCGACCTCTAGTATACT
TGTTGCTGTAGATGAAATTGAGGACAATCTTTACTATTTTAGTGATGTTATTTCTGCTGG
GATTCCTGATGTTGGGAGGTTAATAACAGACAACATTTTGCAGCATTTGATATTTCCATT
GCTTCTTCCTTCTCTAAGGATGGAAGCTGTAAATGAGATGCAGATCAGTGCTGTCACTTC
TCTGTATTTACTTTGTTGCATCTTGCGCATAGTTAAAATCAAAGATCTGGCAAATACTGT
TGCTGCTTCTCTTTTTTGTCCATTAGAGGCTTTTATAAAAATTTCTGAGACTAAACTCAA
TGGCTATATATCTGGTCATGGTTTTACTCACGAAAGAGAACAGTCAGACAGTGATAATCT
TGATACAAAGGTGGAGTCTGGAAGTTTAAGAGTTACCACATCAAACTTGCCTGGTTCTTC
ACAAAGTCATCAAGAAGATGTTGCCTTGCAGCGTAGTTGTAGTGGTGCAAGTTTGGCTTT
AAGGGAGGTCTTGCTTTCTTATGTCAATAATGGGGATGATATGCTAGTTTTGGGTTCTTT
GAGTGTGATAGCAACTTTATTGCAAACAAAAGAACTGGATGAATCGATGCTAGATGCACT
TGGAATTCTTCCACAGCGCAAACAACATAAGAAACTGCTGCTGCAATCTTTGGTTGGTGA
GGGCTCAGATGAAGAGCAACTTTTTTCTCCAGAAAGTAGCTTGATAAGAGATGGTTTCAA
TAGTGAGCTTGATAGCTATCTACTAAAGCTCAAGGAGCAGTATGGAGTGTTGTGTTCTTG
TCCTGAAGTGGCAGCAAGTCCTCGTGTACATAGGTTTCAGGTGCTCGACGCTTTGGTCAA
CCTTTTTTGCCGCTCAAATATTTCTGCAGAGACCTTGTGGGATGGTGGTTGGGCTCTGCG
CCAATTACTTCCTTATAATGAGTCTGAGTTTAACAGTAATCACCTTGAATTGCTCAAAGA
CTCGTACAGGAACTGCATTGGCACTCTCTTGCGGGAGGTTAAAGGTTTCTGGCTAGATCT
ACTTATCACAGTTCTTTGTGATGAGTGGAGGAAGTGCAAAAGAGCAATTGAGGCTTCATC
CCCTCGGAGAGAGCCTAAATATGTGCTATTGCCATTACAAAAGTCCTCTTTTGAAGAGGT
TATTCCAGTTGAATCATCAATTGTTGCTGGTGAAAGAATGTGTGAGTTGGTGAAGGTTTT
TGTGCTTCTTCATCAACTTCAAATTTTCTCCCTTGGTAGAGCTTTGCCTGATCAACCGCC
TATCCTTCCTCCAATTGATGTTCCCCAATCCTTCCGAGCAAAAGCTGCTGGCCTGGGTAT
CTTAGGTCCAAAGCCGGGAACCGAGTTAAGACTTGTTGATGCAGTGCCCTGCAGAATTTC
ATTTGAGAGGGGTAAAGAGCGGCATTTTCGCTTTCTAGCAGTTTCCATGGAAACATCTGG
GTGGGTTCTCCTTGCAGAAGAATTACCCCTAAAACAGCATTATGGAGTTGTTCGTGTTAC
TGCCCCTTTGGCTGGCTCAAATCCTAAAATTGATGATAAGCATGCTAGATGGTTACACCT
GCGGATCCGTCCATCCACTCTGCCCTTTTGGGATTCGGATAAACGCACTACCTATGCCAA
AGTGAACAAAAAAGCTTTGGTTGATGGCAGATGGACCCTGGCATTCAGTGATGAATACTC
TTGCAAGTCTGCATTGTCTATGATTCTCGAGGAGATTAATCTACAAAGTAATGAAGTGGA
GAGAAGAATAAGACCATTACTTGACCTTGAAAGAGAAGTAAATTTTTCAAGCCCTTCTCC
ATGCCCTCTTGAGGCTTCCTCTTCAAGTACAACACCTTCCAATTCTTTGTAAGCTCCTGA
TTGTTTTGAGTTCTCCAATAATATTGCTTTCATGTTAGGGTGACAATACAGCGTGTCTAG
CACCCTTTTGTATATGTTCATAAGAAAACCTTAGATACACAGAAAAATGTAGATTAGCAC
CCATGTTTCAGTGTCATTCTTTGTATACTAGCTCTCTTTTTCTTTGCCCTAATTTGTAAG
TTTATCGGCTTTTACAGCTCATTCTTTATAGATCTCTTAACCGAGGCTTTCTTTTTGCTT
ACCTAGTTTGTAACCTGTGTGACACATTGTAAATTGAGGCGATTCCAAAGAAAGTAAAGT
TGCAAGG