Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0052g00130.t01
CDS Infomation

cds chromosome:12X:11:17156783:17159193:-1 gene:VIT_11s0052g00130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAAGCACTGAACATCCGCTACACCTTCCTCTACCTCACCTTCGTCTTTGCAATTATC
TACCTTCTCCAAACCCTAATCTCCCATAAGCTCATCTTAGGCCGTCAACCCATCACTCTG
AAGCAAAACCCACATCTACCTTTGCGCTTCTCCTCTGATGGCATATTCAAAATCCTCCAG
GTCGCCGATATGCATTTCGGAAACGGAGTGGTGACTCGGTGCCGAGACGTGTTGCCGTCG
GAGCTCGATGGCTGTTCGGATCTCAACACCACTCGGTTCCTCCGGAGGTTGATTGATGAG
GAAAGGCCTGACTTTGTTGCCTTTACAGGGGATAATATATTTGGAACGAGTGCTGCTGAT
GCTGCTGAATCTCTGTTTGAAGTCTTTGGCCCTGTCATGGAATCTAGACTTCCTTGGGCT
GCAATTTTGGGGAACCACGACCAAGAATCAACCATGACCCGTGAAGAATTGATGACACTC
ATCTCCCTTATGGATTATTCAGTCTCACAAATCAATCCAGCTGAAGATCCTTCCAGTCCT
GCCGTAGACATTGACGGATTTGGGAATTATTATCTGAGAGTTAATGGTGCTCCAGGTTCC
CACTTGGCAAACAGCAGTATCCTCAGTCTCTACTTTCTGGACAGTGGAGATAGGGCTACT
GTTAATGGTCGTCGAACTTATGGATGGATTAAAGAATCTCAACTTCGTTGGCTTCGTGGT
GTTTCTCAAGGATTTGAGGGCCAAAAAAGGGATTCTAAACAATCAGCAGACCTCATTTTA
CCACCAGCTGAAACCCCAGCCCTGGCGTTCTTCCACATCCCAGTTCCAGAAGTCCGGCAG
CTCTACTTCAAAGAGATTGTAGGCCAGTTTCAGGAGGCTGTGGCTTGTTCAGCAGTAAAT
TCTGGAGTCCTGCAGACATTTGTCTCCATGGGGGATGTGAAGGCCGTGTTCATGGGCCAT
GATCACACTAATGACTTCTGTGGGAACTTAGATGGCATATGGTTTTGTTATGGTGGAGGG
TGTGGATACCACGGTTATGGTAGGGCAGGGTGGCCAAGGAGAGCCAGGATCATACTTGCG
GAACTTGGGAAAGGGGAGAGGGCTTGGACGGGAGTCAAGAGGATCAGGACATGGAAGCGA
CTTGATGATGAGAAGATGAGCAAGATTGATGAACAAGTCCTATGGGACCTTAATTCATCA
ATATGA

Peptide Sequence

PEP ID

VIT_11s0052g00130.t01
PEP Infomation

pep chromosome:12X:11:17156783:17159193:-1 gene:VIT_11s0052g00130 transcript:VIT_11s0052g00130.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEALNIRYTFLYLTFVFAIIYLLQTLISHKLILGRQPITLKQNPHLPLRFSSDGIFKILQ
VADMHFGNGVVTRCRDVLPSELDGCSDLNTTRFLRRLIDEERPDFVAFTGDNIFGTSAAD
AAESLFEVFGPVMESRLPWAAILGNHDQESTMTREELMTLISLMDYSVSQINPAEDPSSP
AVDIDGFGNYYLRVNGAPGSHLANSSILSLYFLDSGDRATVNGRRTYGWIKESQLRWLRG
VSQGFEGQKRDSKQSADLILPPAETPALAFFHIPVPEVRQLYFKEIVGQFQEAVACSAVN
SGVLQTFVSMGDVKAVFMGHDHTNDFCGNLDGIWFCYGGGCGYHGYGRAGWPRRARIILA
ELGKGERAWTGVKRIRTWKRLDDEKMSKIDEQVLWDLNSSI

Transcript Sequence

Transcript ID

VIT_11s0052g00130.t01
Transcript Infomation

cdna chromosome:12X:11:17156783:17159193:-1 gene:VIT_11s0052g00130 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGCGATGGAAGCACTGAACATCCGCTACACCTTCCTCTACCTCACCTTCGTCTTTGCA
ATTATCTACCTTCTCCAAACCCTAATCTCCCATAAGCTCATCTTAGGCCGTCAACCCATC
ACTCTGAAGCAAAACCCACATCTACCTTTGCGCTTCTCCTCTGATGGCATATTCAAAATC
CTCCAGGTCGCCGATATGCATTTCGGAAACGGAGTGGTGACTCGGTGCCGAGACGTGTTG
CCGTCGGAGCTCGATGGCTGTTCGGATCTCAACACCACTCGGTTCCTCCGGAGGTTGATT
GATGAGGAAAGGCCTGACTTTGTTGCCTTTACAGGGGATAATATATTTGGAACGAGTGCT
GCTGATGCTGCTGAATCTCTGTTTGAAGTCTTTGGCCCTGTCATGGAATCTAGACTTCCT
TGGGCTGCAATTTTGGGGAACCACGACCAAGAATCAACCATGACCCGTGAAGAATTGATG
ACACTCATCTCCCTTATGGATTATTCAGTCTCACAAATCAATCCAGCTGAAGATCCTTCC
AGTCCTGCCGTAGACATTGACGGATTTGGGAATTATTATCTGAGAGTTAATGGTGCTCCA
GGTTCCCACTTGGCAAACAGCAGTATCCTCAGTCTCTACTTTCTGGACAGTGGAGATAGG
GCTACTGTTAATGGTCGTCGAACTTATGGATGGATTAAAGAATCTCAACTTCGTTGGCTT
CGTGGTGTTTCTCAAGGATTTGAGGGCCAAAAAAGGGATTCTAAACAATCAGCAGACCTC
ATTTTACCACCAGCTGAAACCCCAGCCCTGGCGTTCTTCCACATCCCAGTTCCAGAAGTC
CGGCAGCTCTACTTCAAAGAGATTGTAGGCCAGTTTCAGGAGGCTGTGGCTTGTTCAGCA
GTAAATTCTGGAGTCCTGCAGACATTTGTCTCCATGGGGGATGTGAAGGCCGTGTTCATG
GGCCATGATCACACTAATGACTTCTGTGGGAACTTAGATGGCATATGGTTTTGTTATGGT
GGAGGGTGTGGATACCACGGTTATGGTAGGGCAGGGTGGCCAAGGAGAGCCAGGATCATA
CTTGCGGAACTTGGGAAAGGGGAGAGGGCTTGGACGGGAGTCAAGAGGATCAGGACATGG
AAGCGACTTGATGATGAGAAGATGAGCAAGATTGATGAACAAGTCCTATGGGACCTTAAT
TCATCAATATGACTTCCAGATCTGCAGGTATACAATCTCATTTTACCCAAAAACCAGAAC
CAGTTATGTTGTACATTATCATTGTGTCATTAGAATTGTTGATGAAGAGACTTATGGATG
GTTTCTTAACGCTTTCTTCTTTTAATGAAGAATATGAAAATAAAGCTT