Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g01400.t01
CDS Infomation

cds chromosome:12X:11:10944676:10946544:-1 gene:VIT_11s0037g01400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCAAGAAACTGCCAGGGGTTCTCCATTTGGGCTTGGATTTCCTTGTGGTGGCTGAT
GGGACTCTTGATATCAGAGGATTCAGGCCTAAAGTTGCAGTCTTGGTGAGTTTTCTTCAT
CTTTCCTTTGAGAATATGGATTCGGTTCTCTTTCAAATCCAAGAGAAAGCCTTTAATTCT
CCATCAGAGTCACCAGCTTTCCTTTCTCAGTCTCCGCCCCCTCCAGCCAATTTTCAGTCT
GGTGATTACAATTTGAACAGCAAGGTTAGCCCAAGTATTTTGCTCATTATTATAATTCTA
GCCATCATTTTCTTTGTTTCTGGTTTGCTTCACCTCCTTGTTAGATTTCTCCTGAGACAA
CCCAATAGAGAACCTGAAGATTTGGATAACGTGACTGCCCTTCAAGGGCAGTTACAGCAG
CTATTTCATCTCCATGATGCCGGTGTTGATCAGTCTTTCATAGATACCCTTCCTGTCTTC
CTTTACAAAGCCATTATAGGAGCCAAAAACCCATTTGACTGTGCTGTTTGTTTGTGTGAA
TTTGAGGCTGAGGACAAGCTTAGATTGTTACCAAAGTGTAGCCATGCCTTTCACATGGAG
TGTATAGACACATGGCTTTTGTCTCACTCTACCTGTCCTCTCTGCAGAGGCAGCTTGCTT
CCTGATTTCTCTCCAAATGATATCTGTTCACCCATTGTTCTTGTTCTTGAATCTGGGAGT
GAGAGCTCAAGAGAGATTGTTTCAGACAGACATAGTGCCCTTGGCACAAACAATTCTGTT
CTCAGGACAAATTCCCATCTGGGCTGTAATGACAATGAATTTGGGTCTATCCGCATTGAC
CCTTCATATAAATCATGTGAAATCGTGGCGAAGGAGGAGGCCCCTGCTGCGGCTCTACTG
CTGGATTCAGGGGAAAAAGTTGTTCCCGTAAAGCTTGGGAAGTTCAAGAATGTTGATGGG
GGTGGGGAGGGCAGCAGTACCAGTAATGTGGATGAAAGAAGGTGCTTCTCTATGGGGTCT
TTTGAGTATGTAATGGATGAAAATTCTTCACTGCAAGTGCCCATCAGAACCCCGGTAAAG
AAAACCTCCACTAAGAGGCGTTCTCTGCCATTAACACCCGGTGGCAGAATGGCCATGTCT
GAATGTGATTGTGAATCAAGAAGAGAATTCAGTGGTTTTGATGCAGTTAAAGGCGGTGAC
ACTCATATGGGTAGTAGTAGTAGTATTATTACAGGGAATAATGGAAACGGGAATGCTATA
GGGAGGAGTAAAAGAGAGAGCTTCTCAATATCAAAGATCTGGCTCCGGGGGAAGAAGGAG
AATCCAAGTTCAAGGACAGTGGATTCTTCAAGGCGGGCTTTCTCTTACCGATTTCCAGTG
CATTCAAGTAGTGCTGCTGCTGATGATTTGAAGTTGAAGAATGTCAGTAGCAGTACTGGG
AGGACTGTTTCTGAGCTTGAAATTGGGAGGTGGGAAAATGGAGGGAGTGAATTGGGTTGT
GATGAGGAAATGCAGAGCTGTAACAGTTTGGATTCTCAAGCCAATCCGCCATCTTTTGCA
AGGAGGACTTTGCTTTGGCTCATGGGAAGGCAAAACAAGGTTGTTCATTCATCCTTCCCA
CCCAATGTCTAA

Peptide Sequence

PEP ID

VIT_11s0037g01400.t01
PEP Infomation

pep chromosome:12X:11:10944676:10946544:-1 gene:VIT_11s0037g01400 transcript:VIT_11s0037g01400.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MLKKLPGVLHLGLDFLVVADGTLDIRGFRPKVAVLVSFLHLSFENMDSVLFQIQEKAFNS
PSESPAFLSQSPPPPANFQSGDYNLNSKVSPSILLIIIILAIIFFVSGLLHLLVRFLLRQ
PNREPEDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFLYKAIIGAKNPFDCAVCLCE
FEAEDKLRLLPKCSHAFHMECIDTWLLSHSTCPLCRGSLLPDFSPNDICSPIVLVLESGS
ESSREIVSDRHSALGTNNSVLRTNSHLGCNDNEFGSIRIDPSYKSCEIVAKEEAPAAALL
LDSGEKVVPVKLGKFKNVDGGGEGSSTSNVDERRCFSMGSFEYVMDENSSLQVPIRTPVK
KTSTKRRSLPLTPGGRMAMSECDCESRREFSGFDAVKGGDTHMGSSSSIITGNNGNGNAI
GRSKRESFSISKIWLRGKKENPSSRTVDSSRRAFSYRFPVHSSSAAADDLKLKNVSSSTG
RTVSELEIGRWENGGSELGCDEEMQSCNSLDSQANPPSFARRTLLWLMGRQNKVVHSSFP
PNV

Transcript Sequence

Transcript ID

VIT_11s0037g01400.t01
Transcript Infomation

cdna chromosome:12X:11:10944676:10946544:-1 gene:VIT_11s0037g01400 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCTCAAGAAACTGCCAGGGGTTCTCCATTTGGGCTTGGATTTCCTTGTGGTGGCTGAT
GGGACTCTTGATATCAGAGGATTCAGGCCTAAAGTTGCAGTCTTGGTGAGTTTTCTTCAT
CTTTCCTTTGAGAATATGGATTCGGTTCTCTTTCAAATCCAAGAGAAAGCCTTTAATTCT
CCATCAGAGTCACCAGCTTTCCTTTCTCAGTCTCCGCCCCCTCCAGCCAATTTTCAGTCT
GGTGATTACAATTTGAACAGCAAGGTTAGCCCAAGTATTTTGCTCATTATTATAATTCTA
GCCATCATTTTCTTTGTTTCTGGTTTGCTTCACCTCCTTGTTAGATTTCTCCTGAGACAA
CCCAATAGAGAACCTGAAGATTTGGATAACGTGACTGCCCTTCAAGGGCAGTTACAGCAG
CTATTTCATCTCCATGATGCCGGTGTTGATCAGTCTTTCATAGATACCCTTCCTGTCTTC
CTTTACAAAGCCATTATAGGAGCCAAAAACCCATTTGACTGTGCTGTTTGTTTGTGTGAA
TTTGAGGCTGAGGACAAGCTTAGATTGTTACCAAAGTGTAGCCATGCCTTTCACATGGAG
TGTATAGACACATGGCTTTTGTCTCACTCTACCTGTCCTCTCTGCAGAGGCAGCTTGCTT
CCTGATTTCTCTCCAAATGATATCTGTTCACCCATTGTTCTTGTTCTTGAATCTGGGAGT
GAGAGCTCAAGAGAGATTGTTTCAGACAGACATAGTGCCCTTGGCACAAACAATTCTGTT
CTCAGGACAAATTCCCATCTGGGCTGTAATGACAATGAATTTGGGTCTATCCGCATTGAC
CCTTCATATAAATCATGTGAAATCGTGGCGAAGGAGGAGGCCCCTGCTGCGGCTCTACTG
CTGGATTCAGGGGAAAAAGTTGTTCCCGTAAAGCTTGGGAAGTTCAAGAATGTTGATGGG
GGTGGGGAGGGCAGCAGTACCAGTAATGTGGATGAAAGAAGGTGCTTCTCTATGGGGTCT
TTTGAGTATGTAATGGATGAAAATTCTTCACTGCAAGTGCCCATCAGAACCCCGGTAAAG
AAAACCTCCACTAAGAGGCGTTCTCTGCCATTAACACCCGGTGGCAGAATGGCCATGTCT
GAATGTGATTGTGAATCAAGAAGAGAATTCAGTGGTTTTGATGCAGTTAAAGGCGGTGAC
ACTCATATGGGTAGTAGTAGTAGTATTATTACAGGGAATAATGGAAACGGGAATGCTATA
GGGAGGAGTAAAAGAGAGAGCTTCTCAATATCAAAGATCTGGCTCCGGGGGAAGAAGGAG
AATCCAAGTTCAAGGACAGTGGATTCTTCAAGGCGGGCTTTCTCTTACCGATTTCCAGTG
CATTCAAGTAGTGCTGCTGCTGATGATTTGAAGTTGAAGAATGTCAGTAGCAGTACTGGG
AGGACTGTTTCTGAGCTTGAAATTGGGAGGTGGGAAAATGGAGGGAGTGAATTGGGTTGT
GATGAGGAAATGCAGAGCTGTAACAGTTTGGATTCTCAAGCCAATCCGCCATCTTTTGCA
AGGAGGACTTTGCTTTGGCTCATGGGAAGGCAAAACAAGGTTGTTCATTCATCCTTCCCA
CCCAATGTCTAAATCCTCTGTGTCTCTCTTTTGTTTCTTTTTTTTTTCCCCCTTGATAAA
TTGTCTCTTTGGTTCCTTGATTGTGGGATGCAAATTAGAAGATCAGAATTAGAAATGAAC
AAAGAAAAAGAAGGAGAAAAAAAGGAGAAGGGAAATTTAGAAAAAAATCTGAAATACTAG
TTTCTGTATTGAACTGTAAAATGCTTGTTTTCCAGAGCCTATTTGGGGTGGAAGATTGAT
TATTCTTTT