Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g01210.t01
CDS Infomation

cds chromosome:12X:11:10399611:10405935:1 gene:VIT_11s0037g01210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGTTGCTCGTGCCGTGTTGTCTGCTTGGCCATGGGAGAACTTGGGCACCTTCAAGTAT
CTGTTGTATGGACCTTTTATTGGAAAATTGTTATACTCGAAGTTTCATGAGGATGCCCAA
ACGGATACATGGTGCCTGCACATTCTCATCCTATGTGCACTTAGAGGTCTCATTCACCAG
TCATGGTGCTCTTACAGCAACATGCTTTTCCTCACCCGAAACCGCAGAATTCAGAAACAA
GGGGTTGATTTCAAGCAGATTGACAGAGAATGGGACTGGGACAACTTCATACTTCTTCAA
GCTCTCATTGCTTCAGTGGCCTTCTACATCTTTCCATTCCTTTCTGATTTACCTGTATGG
AATACAAGAGGCGTTATTGCTGCTCTGATACTCCACATTGGGGTTTCAGAGCCTCTCTAC
TATTGGGTACACCGATGCTTCCATGGAAACTATCTTTTTACCCGCTACCATTCACTGCAC
CATGCGTCTACAGTCACACAGTCCTTTACAGCCGGGAGTGCAACGTTTTTGGAGCATCTG
ATATTAAGTGCGGTTGTTGGAATTCCAGTACTGGGTTCTTCGCTCATGGGATTTGGATCC
ATCAGCATGATATACGGATATGTCCTCATCTTTGATTTTCTCAGATGCTTGGGGCACTCC
AATGTTGAAGTTGTTCCTCATGCCATGTTCCATGCCTTTCCCTTCCTCAAGTACCTCATC
TACACACCTACATACCACAGCCTGCACCACACTGAGATGGGAACCAACTTCTGCCTTTTC
ATGCCCCTCTTTGATGCACTTGGGAACACCATGAACTGCAAATCATGGGAGCTACACAAG
AAGATAACCTCTGATACAGGAAAATATGGAAGAGTACCGGATTTTGTGTTTCTGGCTCAT
GTGGTGGATGTAATATCAGCACTGCATGTGCCTTTCGTTTTCCGATCTTTTGGATCATTG
CCATTTGCAACAAGGATCTTCTTGCTGCCATTGTGGCCTCAGGCTTTCGTCATAATGCTA
CTGATGTGGGCTTGGTCCAAGACATTCCTTGTCACTTTCTACAATCTAAGAGGCAGGTTG
CACCAGACATGGGCTGTTCCTAGGTTCGGTTTTCAGTATTTCTTACCATTTGCTACAGAG
GGCATCAACAATCAAATAGAGCAGGCCATTTTAAGGGCTGATAGGCTAGGCGTCAAGGTC
ATTAGCCTTGCTGCATTAAATAAGAATGAAGCTTTGAATGGGGGTGGAACCCTCTTTGTT
GACAAGCACCCCAATCTTAAAGTTCGAGTGGTCCATGGGAACACCTTGACAGCTGCAGTT
ATCCTTCATGAGATCCCTCAAGGTGTCAAAGAGGTGTTCTTAACAGGAGCTACTTCAAAG
CTGGGAAGAGCAATTGCCCTGTACCTTTGTCAACGAAAAGTACGAGTCCTGATGTTGACT
CTATCAACGGAAAGGTTCCAAAAGATTCAGAGGGAAGCCCCGGTCGAATTTCAAAACTAC
CTAGTCCAAGTGACCAAGTACCAAGCTGCCCAAAACTGTAAGACGTGGATTGTGGGCAAG
TGGATCACACCAAGACAGCAGAACTGGGCCCCATCAGGTGCACATTTTCATCAATTCGTG
GTCCCTCCCATTCTGCCCTTCAGAAGAGACTGCACTTATGGCGACCTTGCTGCCTTAAAA
TTACCTGAAGATGTCCAAGGGCTTGGGAGCTGTGAGTATACCATGGAAAGAGGAGTAGTC
CACGCGTGTCATGCGGGTGGCGTGGTCCATGTCTTGGAAGGTTGGACTCACCATGAAGTT
GGGGCTCTGGACGTGGACAGAATCGATGTGGTTTGGAAAGCTGCATTAAAACATGGGCTG
AAGCCAGTGAATGAGGCCATGGAACAAAATCCTCAATAA

Peptide Sequence

PEP ID

VIT_11s0037g01210.t01
PEP Infomation

pep chromosome:12X:11:10399611:10405935:1 gene:VIT_11s0037g01210 transcript:VIT_11s0037g01210.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MVARAVLSAWPWENLGTFKYLLYGPFIGKLLYSKFHEDAQTDTWCLHILILCALRGLIHQ
SWCSYSNMLFLTRNRRIQKQGVDFKQIDREWDWDNFILLQALIASVAFYIFPFLSDLPVW
NTRGVIAALILHIGVSEPLYYWVHRCFHGNYLFTRYHSLHHASTVTQSFTAGSATFLEHL
ILSAVVGIPVLGSSLMGFGSISMIYGYVLIFDFLRCLGHSNVEVVPHAMFHAFPFLKYLI
YTPTYHSLHHTEMGTNFCLFMPLFDALGNTMNCKSWELHKKITSDTGKYGRVPDFVFLAH
VVDVISALHVPFVFRSFGSLPFATRIFLLPLWPQAFVIMLLMWAWSKTFLVTFYNLRGRL
HQTWAVPRFGFQYFLPFATEGINNQIEQAILRADRLGVKVISLAALNKNEALNGGGTLFV
DKHPNLKVRVVHGNTLTAAVILHEIPQGVKEVFLTGATSKLGRAIALYLCQRKVRVLMLT
LSTERFQKIQREAPVEFQNYLVQVTKYQAAQNCKTWIVGKWITPRQQNWAPSGAHFHQFV
VPPILPFRRDCTYGDLAALKLPEDVQGLGSCEYTMERGVVHACHAGGVVHVLEGWTHHEV
GALDVDRIDVVWKAALKHGLKPVNEAMEQNPQ

Transcript Sequence

Transcript ID

VIT_11s0037g01210.t01
Transcript Infomation

cdna chromosome:12X:11:10399611:10405935:1 gene:VIT_11s0037g01210 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACCAAGTTTCACAAATACAGGGGCTTAATCAAGTTGTTTCATTATCCAATTATTTTATTA
TAAGGCAATTCCAACCTCTTAACCTCTCGATCTCTTTCCTTCTTTCTGCTGCTTCTATCT
GGGAATTGTTTCCTTCCCTTTCCTCTCTTTCTTTTTCTTGTATTTGGCTTCTTCTACTAT
TTTGGGCTACAATATCTCGGATCTTTCTGTTCCCGAACTGAAACTTTTCCTCATCAAAAG
CCTGTACAGATAGAGAAGAGTTTGCACATATATTAAGAAAGGAATAATTTTGTCGGAAAA
ATGGTTGCTCGTGCCGTGTTGTCTGCTTGGCCATGGGAGAACTTGGGCACCTTCAAGTAT
CTGTTGTATGGACCTTTTATTGGAAAATTGTTATACTCGAAGTTTCATGAGGATGCCCAA
ACGGATACATGGTGCCTGCACATTCTCATCCTATGTGCACTTAGAGGTCTCATTCACCAG
TCATGGTGCTCTTACAGCAACATGCTTTTCCTCACCCGAAACCGCAGAATTCAGAAACAA
GGGGTTGATTTCAAGCAGATTGACAGAGAATGGGACTGGGACAACTTCATACTTCTTCAA
GCTCTCATTGCTTCAGTGGCCTTCTACATCTTTCCATTCCTTTCTGATTTACCTGTATGG
AATACAAGAGGCGTTATTGCTGCTCTGATACTCCACATTGGGGTTTCAGAGCCTCTCTAC
TATTGGGTACACCGATGCTTCCATGGAAACTATCTTTTTACCCGCTACCATTCACTGCAC
CATGCGTCTACAGTCACACAGTCCTTTACAGCCGGGAGTGCAACGTTTTTGGAGCATCTG
ATATTAAGTGCGGTTGTTGGAATTCCAGTACTGGGTTCTTCGCTCATGGGATTTGGATCC
ATCAGCATGATATACGGATATGTCCTCATCTTTGATTTTCTCAGATGCTTGGGGCACTCC
AATGTTGAAGTTGTTCCTCATGCCATGTTCCATGCCTTTCCCTTCCTCAAGTACCTCATC
TACACACCTACATACCACAGCCTGCACCACACTGAGATGGGAACCAACTTCTGCCTTTTC
ATGCCCCTCTTTGATGCACTTGGGAACACCATGAACTGCAAATCATGGGAGCTACACAAG
AAGATAACCTCTGATACAGGAAAATATGGAAGAGTACCGGATTTTGTGTTTCTGGCTCAT
GTGGTGGATGTAATATCAGCACTGCATGTGCCTTTCGTTTTCCGATCTTTTGGATCATTG
CCATTTGCAACAAGGATCTTCTTGCTGCCATTGTGGCCTCAGGCTTTCGTCATAATGCTA
CTGATGTGGGCTTGGTCCAAGACATTCCTTGTCACTTTCTACAATCTAAGAGGCAGGTTG
CACCAGACATGGGCTGTTCCTAGGTTCGGTTTTCAGTATTTCTTACCATTTGCTACAGAG
GGCATCAACAATCAAATAGAGCAGGCCATTTTAAGGGCTGATAGGCTAGGCGTCAAGGTC
ATTAGCCTTGCTGCATTAAATAAGAATGAAGCTTTGAATGGGGGTGGAACCCTCTTTGTT
GACAAGCACCCCAATCTTAAAGTTCGAGTGGTCCATGGGAACACCTTGACAGCTGCAGTT
ATCCTTCATGAGATCCCTCAAGGTGTCAAAGAGGTGTTCTTAACAGGAGCTACTTCAAAG
CTGGGAAGAGCAATTGCCCTGTACCTTTGTCAACGAAAAGTACGAGTCCTGATGTTGACT
CTATCAACGGAAAGGTTCCAAAAGATTCAGAGGGAAGCCCCGGTCGAATTTCAAAACTAC
CTAGTCCAAGTGACCAAGTACCAAGCTGCCCAAAACTGTAAGACGTGGATTGTGGGCAAG
TGGATCACACCAAGACAGCAGAACTGGGCCCCATCAGGTGCACATTTTCATCAATTCGTG
GTCCCTCCCATTCTGCCCTTCAGAAGAGACTGCACTTATGGCGACCTTGCTGCCTTAAAA
TTACCTGAAGATGTCCAAGGGCTTGGGAGCTGTGAGTATACCATGGAAAGAGGAGTAGTC
CACGCGTGTCATGCGGGTGGCGTGGTCCATGTCTTGGAAGGTTGGACTCACCATGAAGTT
GGGGCTCTGGACGTGGACAGAATCGATGTGGTTTGGAAAGCTGCATTAAAACATGGGCTG
AAGCCAGTGAATGAGGCCATGGAACAAAATCCTCAATAAAACAATACAAAAAATAATCTT
ATATTGGAAAGATGATGAAGCCTTTGGTTGTAACAAGTCCATTGTTTTGGCTTTTTTATC
ATTTTTTATTTTTACTTTTATAGGTGAGCAAACAAAAAAGTGGTTTAGTTTGCAATTCAC
TTCAAGTGTCGTCGTATAATTGTACTGGTTGATTCATACCTTAATGAAGCAAAGCTACCA
TCCTAT