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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g00520.t01
CDS Infomation

cds chromosome:12X:11:8350278:8368442:1 gene:VIT_11s0037g00520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor IF-3 [Source:UniProtKB/TrEMBL;Acc:D7U1D4]
Sequence

ATGGCTGGGCTAACCAGTGGCATTCCCTTCAAACCCTTCATTTTTCGAACCAAGACGACG
TCGTCTCCTCTCTATTTCTCCTTGGACTCACAGCTCTTCGGTGTCCGCCTCTGTAGCCCT
ACCTTCTCCAAATGCCGCTCTTTCTCCTCCTCTCTCCATCGCTCCGTCACCGCTCGATAT
GGTGGCTACCGCTCCTCCGGAGATGCATGGCGATCGAGGCAGAGAGATTCCGATGATGAT
CAAGCTTTGGATGTCTCCTCCATCAGGTCGGCTTCCGTAAGGCTTATTGACGAGCAGCAG
AATATGGTGGGAGTGGTGTCTAAAAGCCAGGCAATTCAAATGGCTGAAGACGCTGAACTT
GATCTGGTAGTATTATCTCCGGATGCAGATCCTCCTGTTGTCAGAATAATGGATTACAAT
AAGTATAGATATGAACTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGCCAAT
CGCATGGATTTAAAGGAGCTCAAAATGGGTTATAACATTGATTCACATGATTATTCTGTG
CGTTTGAAAGCTGCAAGAAAGTTTCTGCAAGATGGTGACAAGGTCAAGATTATAGTGAAC
TTGAAGGGCCGTGAAAATGAGTTCAGGAATATTGCTATTGAGCTTATCAGACGTTTTCAG
AATGATGTAGGAGAGCTTGCGACTGAGGAGAGCAAAAACTTCAGTGTCAGGAACATTTTT
ATTGTTTTGGTTCCAAACAAAGCCCTTCTTCAGAAAGGTCAAGAATCATCCAAGAAAACG
GAAAAGTCAGCAGCAACTGAAATCTCAGCTGGTGTGTGA

Peptide Sequence

PEP ID

VIT_11s0037g00520.t01
PEP Infomation

pep chromosome:12X:11:8350278:8368442:1 gene:VIT_11s0037g00520 transcript:VIT_11s0037g00520.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor IF-3 [Source:UniProtKB/TrEMBL;Acc:D7U1D4]
Sequence

MAGLTSGIPFKPFIFRTKTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHRSVTARY
GGYRSSGDAWRSRQRDSDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAEL
DLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSV
RLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIF
IVLVPNKALLQKGQESSKKTEKSAATEISAGV

Transcript Sequence

Transcript ID

VIT_11s0037g00520.t01
Transcript Infomation

cdna chromosome:12X:11:8350278:8368442:1 gene:VIT_11s0037g00520 gene_biotype:protein_coding transcript_biotype:protein_coding description:Translation initiation factor IF-3 [Source:UniProtKB/TrEMBL;Acc:D7U1D4]
Sequence

GGATAAGGTTGAGCTTTGATGTGTTAGCTTCAGTCTCTGCGCAACGCCATGGCTGGGCTA
ACCAGTGGCATTCCCTTCAAACCCTTCATTTTTCGAACCAAGACGACGTCGTCTCCTCTC
TATTTCTCCTTGGACTCACAGCTCTTCGGTGTCCGCCTCTGTAGCCCTACCTTCTCCAAA
TGCCGCTCTTTCTCCTCCTCTCTCCATCGCTCCGTCACCGCTCGATATGGTGGCTACCGC
TCCTCCGGAGATGCATGGCGATCGAGGCAGAGAGATTCCGATGATGATCAAGCTTTGGAT
GTCTCCTCCATCAGGTCGGCTTCCGTAAGGCTTATTGACGAGCAGCAGAATATGGTGGGA
GTGGTGTCTAAAAGCCAGGCAATTCAAATGGCTGAAGACGCTGAACTTGATCTGGTAGTA
TTATCTCCGGATGCAGATCCTCCTGTTGTCAGAATAATGGATTACAATAAGTATAGATAT
GAACTGCAAAAGAAGAAAAGAGGACAGCAGAAGAAAAGTGCTGCCAATCGCATGGATTTA
AAGGAGCTCAAAATGGGTTATAACATTGATTCACATGATTATTCTGTGCGTTTGAAAGCT
GCAAGAAAGTTTCTGCAAGATGGTGACAAGGTCAAGATTATAGTGAACTTGAAGGGCCGT
GAAAATGAGTTCAGGAATATTGCTATTGAGCTTATCAGACGTTTTCAGAATGATGTAGGA
GAGCTTGCGACTGAGGAGAGCAAAAACTTCAGTGTCAGGAACATTTTTATTGTTTTGGTT
CCAAACAAAGCCCTTCTTCAGAAAGGTCAAGAATCATCCAAGAAAACGGAAAAGTCAGCA
GCAACTGAAATCTCAGCTGGTGTGTGAGATGCGCCCAAAAGTTCTATGTGAGGTGGCAAT
AGAGTGTCCGCCAGTAATCTTCAGTTATATTCTTCAACCAGAATGCGGACCTTGCAAAGT
CTGTAAAGCATTACAAGGCCTGTATGAGAATACAATCATTTTTATTTGATATAACTGGAG
CAGCAGCCTCTGTAGTTCAGATACTCGTAAAATTTGATAGGCATACCTACTCAAAGAAAT
CAAATTTCCCCTAGTTCAAAACAACTAAGATGTAGAGAAGTGAGAGTTTGTATGGATCTA
TGGTTAGATTTCATGGATGCAGTAATTTTGACAATATTAGTTGTGTTTATATCCATCCAA
TTTTGCATGATATCTGTACATGAAAATA