Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g00440.t01
CDS Infomation

cds chromosome:12X:11:8236200:8237855:-1 gene:VIT_11s0037g00440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGATTGAGGTGAAGAAGTGGAGTATGGTATGCCCAGCAAAGCATACCCCCAAACAC
ACCCTCTGGATGTCCAACTTGGACTCGGTGGTTCCTAGAATTCACGTGCCCACTGTCTAC
TTGTACAAGCCCAACGCTTTTTGTTCCAATTTCTTCGACGCCAGTCGGCTTAAGGAGGCT
CTCAGCAACGCTCTTGTACAATTCTATCCGGTGGCCGGAAGGTTGGGGTTGGATGCAAAT
GGTAGAATTCAAATCAACTGTAATGGAGAGGGTGTGTTATTTCAGGAGGCGGAAGCGGAT
GCTATTATTGATGACTTGGGGGACTTCACGCCTAGTCACCGACTACGGCACCTCATTCCG
GTGGTGGACCATTCTGCCCACATTTCTTCTTATCCGCTCCTCCTCTTACAAGTAACTTAC
TTTAAGTGTGGGGGAGTCTGCCTGGGTGTGGCCATTCACCACATGGTAGCCGACGGCAGC
GGTTGCATCCATTTCATCAACTCATGGTCTGATATCACACGTGGTATCCCCATCGCCATC
TCACCCTTCTTTGATCGGACGATTCTCCGTGCTCGTGACCCGCCTGCTCCAAGATTCTCC
CACGTGGAATACCTTCCTCCACCTCCTCTCCACGGCCCATCCACCCTTAAGCCCACTTCC
ACGCTCATCCTTCATCTCACACCTGAGCACCTCAACGCCCTCAAAGCCAAATCTGTGCGC
CATGGAAGCCCAAGCCCAAGCTCAGTGAAGTATAGTACCTATGAAACCTTGGCAGCCCAC
TTGTGGCGCTGCATATGCAAGGCACGTGGCCTCTCCCATGATCAACCCACCAAATTGTAC
ATCCCCACCGATGGACGGTTGAGATTGCGTCCTACACTCCCACCTGGTTACTTTGGGAAT
GCACTTTTCACGTCGACGTTAACTGCCAATTCGGGTGATCTCCAATCTGAAGCCTTCTCA
GACACTGTTCAGAGGATTCGCAACGCAATAGCAGGGATGGAGGATGAGTATCTGAGATCG
GCTGTTGACTACCTTGAGATGCAGCCCAATCTAACGGCTCTAGTTAGAGGGGCTCACACA
TTCCGTAGCCCGAACCTCGTGGTTGGGAGCTGGACACGACTACCAATCCATGATGCGAAT
TTTGGGTGGGGAAGGCCCATGCATATGGGGCTGGGGAGTGGGGTGTTCGAGGGAAATGCA
TGCATACAGCGGAGCCCAACCAAGGACAACCATTTGTCTGTAGTGATATGCTTAGAGGCT
CAGCCCATGCAACTCTTCAAGGATTTGTTATATGACATCTGA

Peptide Sequence

PEP ID

VIT_11s0037g00440.t01
PEP Infomation

pep chromosome:12X:11:8236200:8237855:-1 gene:VIT_11s0037g00440 transcript:VIT_11s0037g00440.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKIEVKKWSMVCPAKHTPKHTLWMSNLDSVVPRIHVPTVYLYKPNAFCSNFFDASRLKEA
LSNALVQFYPVAGRLGLDANGRIQINCNGEGVLFQEAEADAIIDDLGDFTPSHRLRHLIP
VVDHSAHISSYPLLLLQVTYFKCGGVCLGVAIHHMVADGSGCIHFINSWSDITRGIPIAI
SPFFDRTILRARDPPAPRFSHVEYLPPPPLHGPSTLKPTSTLILHLTPEHLNALKAKSVR
HGSPSPSSVKYSTYETLAAHLWRCICKARGLSHDQPTKLYIPTDGRLRLRPTLPPGYFGN
ALFTSTLTANSGDLQSEAFSDTVQRIRNAIAGMEDEYLRSAVDYLEMQPNLTALVRGAHT
FRSPNLVVGSWTRLPIHDANFGWGRPMHMGLGSGVFEGNACIQRSPTKDNHLSVVICLEA
QPMQLFKDLLYDI

Transcript Sequence

Transcript ID

VIT_11s0037g00440.t01
Transcript Infomation

cdna chromosome:12X:11:8236200:8237855:-1 gene:VIT_11s0037g00440 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TTGTATGTGATTCTTTTGTTTTTGCTATAGTGTGATATCTTAACAGAAATTTTATTTTCT
ATAGCAGCTTTGCTAGCTTTTAGAAGAAAGTAATGTTGTAGGGGTATAGGGAGGTGGGTG
AGATGAAGATTGAGGTGAAGAAGTGGAGTATGGTATGCCCAGCAAAGCATACCCCCAAAC
ACACCCTCTGGATGTCCAACTTGGACTCGGTGGTTCCTAGAATTCACGTGCCCACTGTCT
ACTTGTACAAGCCCAACGCTTTTTGTTCCAATTTCTTCGACGCCAGTCGGCTTAAGGAGG
CTCTCAGCAACGCTCTTGTACAATTCTATCCGGTGGCCGGAAGGTTGGGGTTGGATGCAA
ATGGTAGAATTCAAATCAACTGTAATGGAGAGGGTGTGTTATTTCAGGAGGCGGAAGCGG
ATGCTATTATTGATGACTTGGGGGACTTCACGCCTAGTCACCGACTACGGCACCTCATTC
CGGTGGTGGACCATTCTGCCCACATTTCTTCTTATCCGCTCCTCCTCTTACAAGTAACTT
ACTTTAAGTGTGGGGGAGTCTGCCTGGGTGTGGCCATTCACCACATGGTAGCCGACGGCA
GCGGTTGCATCCATTTCATCAACTCATGGTCTGATATCACACGTGGTATCCCCATCGCCA
TCTCACCCTTCTTTGATCGGACGATTCTCCGTGCTCGTGACCCGCCTGCTCCAAGATTCT
CCCACGTGGAATACCTTCCTCCACCTCCTCTCCACGGCCCATCCACCCTTAAGCCCACTT
CCACGCTCATCCTTCATCTCACACCTGAGCACCTCAACGCCCTCAAAGCCAAATCTGTGC
GCCATGGAAGCCCAAGCCCAAGCTCAGTGAAGTATAGTACCTATGAAACCTTGGCAGCCC
ACTTGTGGCGCTGCATATGCAAGGCACGTGGCCTCTCCCATGATCAACCCACCAAATTGT
ACATCCCCACCGATGGACGGTTGAGATTGCGTCCTACACTCCCACCTGGTTACTTTGGGA
ATGCACTTTTCACGTCGACGTTAACTGCCAATTCGGGTGATCTCCAATCTGAAGCCTTCT
CAGACACTGTTCAGAGGATTCGCAACGCAATAGCAGGGATGGAGGATGAGTATCTGAGAT
CGGCTGTTGACTACCTTGAGATGCAGCCCAATCTAACGGCTCTAGTTAGAGGGGCTCACA
CATTCCGTAGCCCGAACCTCGTGGTTGGGAGCTGGACACGACTACCAATCCATGATGCGA
ATTTTGGGTGGGGAAGGCCCATGCATATGGGGCTGGGGAGTGGGGTGTTCGAGGGAAATG
CATGCATACAGCGGAGCCCAACCAAGGACAACCATTTGTCTGTAGTGATATGCTTAGAGG
CTCAGCCCATGCAACTCTTCAAGGATTTGTTATATGACATCTGAAGGAAATGCAGGTCAC
CCAAAAGCCCATTCCTCCTATGCTCTTCTTCCAGTAATCTATTATTGCTTATTGGCATTC
AAGCCTATAATATATTAGCCTGTTCGTCTCCTCATT