Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g00180.t01
CDS Infomation

cds chromosome:12X:11:7893325:7904715:1 gene:VIT_11s0037g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCCGCTACCGCATCCCCCGTTGTTCTTTCCTTGGTCTCTTCACTCTTCGCTTCTGCA
TCCTCTTCTTCTTGTTCCTCTCTCATTTTCACCAGACTCCGCTCTTCCCCTTCCCTTCCA
TTTTCCTTTGCTGTCAAGCCCCTGTGTTTTCGCAGAGGGAAGCTCATGGCTCACACTCTC
GCCCGGGCCACTCTCGGCCTCACTCACCCTTCCAATGTCGAACCCCCTAAGATCTCTTTC
ACTGCCAAAGAGATCGATTTGGTGGAATGGAAAGGAGACATTCTTGCAGTGGGTGTTACG
GAGAAAGACATGGCTAAAGATGAGAACTTGAAGTTTGAGAACCCAATTTTGAAGAAGCTA
GATTCTCAGTTGGGTGGTCTTTTAGCTGAAGCATCCTCCGAGGAAGATTTTACAGGAAAA
TCTGGACAGTCAACAATTCTTAGGCTCCCTGGTCTTGGCTCGAAAAGGGTTGGCTTGATT
GGGCTCGGACAGTTGACGCCATGTTCACCCCCAGCAGCTTATCGGAGTCTTGGTGAGACT
GTTGCAGTGGCAGCCAAGGCGGCTCAAGCAAGTGATGTTGCCATTGTGCTTGCTTCTTCT
GAGGGGCTTTCTGCTGAATCAAAGATTTATACCGCTTCTGCCATAGCTTCTGGGGCTGTG
CTGGGCATTCATGAGGATAATAGGTTTAAGTCAGAGTCAAAGAAGCCAGCTCTTAAATCT
GTGGATATCATTGGCCTTGGAACTGGACCTGACGTACAGAAGAAGCTCAAGTATGCAGAA
GATGTCTGTTCTGGGGTAATTTTTGGAAAAGAACTTGTAAATGCACCTGCCAATGTGCTT
ACCCCTGGGGTATTAGCAGAAGAGGCTTCAAAAATTGCTTCCGCATACAGTGATGTCCTT
TCAGCAAAAATTTTGGATGCAGAGCAATGCAAGGAACTGAAAATGGGTTCCTATCTTGGA
GTTGCTGCTGCTTCTGCAAATCCCCCTCATTTCATCCACTTGTGTTACAAGCCTCTAACT
GGACCTGTCAAGGCCAAACTGGGATTGGTTGGTAAAGGATTGACTTTTGACAGTGGTGGC
TACAACATCAAGACTGGACCTGGCTGTTCTATTGAGCTCATGAAGTTTGATATGGGGGGT
TCAGCTGCGGTTCTCGGTGCAGCAAAAGCCATTGGTCAAATTAAACCTTCTGGAGTGGAG
GTGCATTTCATTGTTGCAGCTTGTGAGAATATGATAAGTGGAACAGGCATGAGGCCTGGA
GACGTTGTCACAGCTTCAAATGGAAAGACAATTGAGGTCAATAACACAGATGCAGAGGGC
AGACTCACACTTGCAGACGCTTTGGTATATGCTTGTAACCAAGGTGTAGAGAAGATTGTT
GATCTAGCAACATTAACTGGGGCCTGTGTAGTTGCTCTTGGGCCCTCAATTGCAGGTGTC
TTTACGCCCAGTGATGACCTTGCTAAAGAGGTACTAGCAGCTTCAGAAGCAAGTGGGGAG
AAACTTTGGAGAATGCCTATGGAGGAGAGTTATTGGGAGTCCATGAAATCAGGAGTAGCT
GATATGGTCAACACTGGTGGCCGTCCAGGTGGTGCTATCACTGCAGCTCTGTTCTTGAAA
CAGTTTGTGGACGAGAAGGTTCAGTGGATGCATATCGACATGGCCGGTCCAGTTTGGAAC
GATAAGAAGCGGGCTGCAACAGGATTTGGCATTTCAACTCTGGTGGAATGGGTTCTGAAG
AACTCTTCTTAG

Peptide Sequence

PEP ID

VIT_11s0037g00180.t01
PEP Infomation

pep chromosome:12X:11:7893325:7904715:1 gene:VIT_11s0037g00180 transcript:VIT_11s0037g00180.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAATASPVVLSLVSSLFASASSSSCSSLIFTRLRSSPSLPFSFAVKPLCFRRGKLMAHTL
ARATLGLTHPSNVEPPKISFTAKEIDLVEWKGDILAVGVTEKDMAKDENLKFENPILKKL
DSQLGGLLAEASSEEDFTGKSGQSTILRLPGLGSKRVGLIGLGQLTPCSPPAAYRSLGET
VAVAAKAAQASDVAIVLASSEGLSAESKIYTASAIASGAVLGIHEDNRFKSESKKPALKS
VDIIGLGTGPDVQKKLKYAEDVCSGVIFGKELVNAPANVLTPGVLAEEASKIASAYSDVL
SAKILDAEQCKELKMGSYLGVAAASANPPHFIHLCYKPLTGPVKAKLGLVGKGLTFDSGG
YNIKTGPGCSIELMKFDMGGSAAVLGAAKAIGQIKPSGVEVHFIVAACENMISGTGMRPG
DVVTASNGKTIEVNNTDAEGRLTLADALVYACNQGVEKIVDLATLTGACVVALGPSIAGV
FTPSDDLAKEVLAASEASGEKLWRMPMEESYWESMKSGVADMVNTGGRPGGAITAALFLK
QFVDEKVQWMHIDMAGPVWNDKKRAATGFGISTLVEWVLKNSS

Transcript Sequence

Transcript ID

VIT_11s0037g00180.t01
Transcript Infomation

cdna chromosome:12X:11:7893325:7904715:1 gene:VIT_11s0037g00180 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GAAAGTAGTCTCAGTTTGACGCGGAGAGGGTGCTTTGCAGTTCCACTATAAATTGATAGA
GAAGCCCACACCGTAGAATGGCCGCTACCGCATCCCCCGTTGTTCTTTCCTTGGTCTCTT
CACTCTTCGCTTCTGCATCCTCTTCTTCTTGTTCCTCTCTCATTTTCACCAGACTCCGCT
CTTCCCCTTCCCTTCCATTTTCCTTTGCTGTCAAGCCCCTGTGTTTTCGCAGAGGGAAGC
TCATGGCTCACACTCTCGCCCGGGCCACTCTCGGCCTCACTCACCCTTCCAATGTCGAAC
CCCCTAAGATCTCTTTCACTGCCAAAGAGATCGATTTGGTGGAATGGAAAGGAGACATTC
TTGCAGTGGGTGTTACGGAGAAAGACATGGCTAAAGATGAGAACTTGAAGTTTGAGAACC
CAATTTTGAAGAAGCTAGATTCTCAGTTGGGTGGTCTTTTAGCTGAAGCATCCTCCGAGG
AAGATTTTACAGGAAAATCTGGACAGTCAACAATTCTTAGGCTCCCTGGTCTTGGCTCGA
AAAGGGTTGGCTTGATTGGGCTCGGACAGTTGACGCCATGTTCACCCCCAGCAGCTTATC
GGAGTCTTGGTGAGACTGTTGCAGTGGCAGCCAAGGCGGCTCAAGCAAGTGATGTTGCCA
TTGTGCTTGCTTCTTCTGAGGGGCTTTCTGCTGAATCAAAGATTTATACCGCTTCTGCCA
TAGCTTCTGGGGCTGTGCTGGGCATTCATGAGGATAATAGGTTTAAGTCAGAGTCAAAGA
AGCCAGCTCTTAAATCTGTGGATATCATTGGCCTTGGAACTGGACCTGACGTACAGAAGA
AGCTCAAGTATGCAGAAGATGTCTGTTCTGGGGTAATTTTTGGAAAAGAACTTGTAAATG
CACCTGCCAATGTGCTTACCCCTGGGGTATTAGCAGAAGAGGCTTCAAAAATTGCTTCCG
CATACAGTGATGTCCTTTCAGCAAAAATTTTGGATGCAGAGCAATGCAAGGAACTGAAAA
TGGGTTCCTATCTTGGAGTTGCTGCTGCTTCTGCAAATCCCCCTCATTTCATCCACTTGT
GTTACAAGCCTCTAACTGGACCTGTCAAGGCCAAACTGGGATTGGTTGGTAAAGGATTGA
CTTTTGACAGTGGTGGCTACAACATCAAGACTGGACCTGGCTGTTCTATTGAGCTCATGA
AGTTTGATATGGGGGGTTCAGCTGCGGTTCTCGGTGCAGCAAAAGCCATTGGTCAAATTA
AACCTTCTGGAGTGGAGGTGCATTTCATTGTTGCAGCTTGTGAGAATATGATAAGTGGAA
CAGGCATGAGGCCTGGAGACGTTGTCACAGCTTCAAATGGAAAGACAATTGAGGTCAATA
ACACAGATGCAGAGGGCAGACTCACACTTGCAGACGCTTTGGTATATGCTTGTAACCAAG
GTGTAGAGAAGATTGTTGATCTAGCAACATTAACTGGGGCCTGTGTAGTTGCTCTTGGGC
CCTCAATTGCAGGTGTCTTTACGCCCAGTGATGACCTTGCTAAAGAGGTACTAGCAGCTT
CAGAAGCAAGTGGGGAGAAACTTTGGAGAATGCCTATGGAGGAGAGTTATTGGGAGTCCA
TGAAATCAGGAGTAGCTGATATGGTCAACACTGGTGGCCGTCCAGGTGGTGCTATCACTG
CAGCTCTGTTCTTGAAACAGTTTGTGGACGAGAAGGTTCAGTGGATGCATATCGACATGG
CCGGTCCAGTTTGGAACGATAAGAAGCGGGCTGCAACAGGATTTGGCATTTCAACTCTGG
TGGAATGGGTTCTGAAGAACTCTTCTTAGTCTGGCTGGAATTTGCTGTTGAAAATTCTCA
ATTGGGTTGGTGCTGACCCTGCAATAAAATATGTTGGAAAAGAGAATGGAAAGTGATGAG
CTGAACCATTGATCATCCTCTGTCTATTACAGAAAACTATATATCTATTTATATTTACTG
CTTTTTCTCTTTTAAG