Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g00050.t01
CDS Infomation

cds chromosome:12X:11:7667139:7689127:-1 gene:VIT_11s0037g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCGGTTACGGACAAGGAGCTGGAAGAACAGCTCGTGGCTGCAGGAGAAGAGCTACTG
AAGCCTTTACCATGTGTGGAAGAACTTCTTAGTCTGCTTGACAAACTTGAGAGTTTTTTA
GCAAAGGTAGAGCAATCTCCATCAAAATCTATGCAAACTGCAGTATGCCCTGCAATGAAG
GCACTTGTGGTGAAAGAACTGTTGAATCATTTGGATGTGGATGTGAGAGTTGTTGTTGCA
TCTTGCATCAGTGAGATCACTAGAATAACAGCTCCAGATGCTCCTTACGATGATGACCAG
ATGAAGGAAATTTTTGAGTTGATTGTAGCAACATTCGAAAATTTGTCTGATACTTCCAGT
CGATCATATCCTAAGAGAGTTTCAATCCTTGAAACTGTTGCAAAGGTCAGATCATGCGTT
GTCATGCTGGATCTTGAATGTGATTCCCTGATTATAAAGATGTTCAAACATTTCTTGGGA
ACTATAAGGGAAACCCACTCAGATGATGTCTATTCATCGATGGAGACCATTATGACCTTG
GTCTTAGAAGAAAGTGAAGAGGTTTCACCAGAGCTTCTTGCACCCCTCTTGGATAGTTTA
AGGGTTGGAAATCAGGATGTTTTGCTTATTGCACGGAAGCTGGGGAAGAAAGTAATTCAA
AATTGTGCCTTGAAACTTAGACCCTACATGATGCAAGCAGTAGAATTCATGGGTTTTCCC
TTGGACAATTACTATGAAATTGTTGCTTCCATATGCCAGGAGACATCTGATGCTATAAAG
CACAATGATGCTAATGTTTCTAATGAATGTGTGGATGCTAAAGCTCTTGCACCAGATGTT
TCATGTTCTGGAGGGCGTGATGGCACAACAAACACATCAGGAAAATTGGTGACAAGCAAT
GGTACTGTTCAGATTGGGATTAGTGATTCTTTAGTTAATCCAGTTTCTCCTAACAAGGGG
CTGGTGCAATCCCATCAAATTAATCAGTCCAAAGGTAATGATGCAACAATCAAGGCTGAA
CCTGAAAGTGATCCTGTGGATGTTGAAAAATCAGAAACAAAATCCAAGCAGCCCACAAAG
AGAAGGGGAAGGAAATCCTGCAGTTCGACTGCTAAAACAGAAACATCTGGCCAGTCTCAA
ATTGACAGCGGAAAAGAAGCTTTGGAACTTTTGGGACCGAAGAGCTGTGTTGGAGAGATT
GGGAGCTCAACTTCTGTTGACCCATCTTCCAACATTGCTGATGTTCCTTTTCAACATGAA
AAGGAAACCACTCAAATTCCCTCTCAAGAAGCTGGAAAAAATGAGATGCCAAACCCTTTG
CCTTCTTTGAGTGAGGGCCAGCCTGATGGAAGTGCTTCCAAAAGGAGCCAAAGAAGGACA
AAGAAGAAGGGAAGCAAGAATCTGGAAGCTGATCTGATTTCTACTTCAGTGCCAATGGGA
AATTTGTTGCAGGACCAGGTTGAGGGGGAAGTTCCACCCTCTACAACTGTCCTGACTAAA
AAGGAATTTGAGAGAGCAAGTGATTCAGAAACCAAAAGGCAGAAACGAACAGGTAAAAAG
GCACTTGTTGAAAATAATGATGATGAGAAAACTTCAACCCTTGGAGATGATGCTATCATG
AAGAAGAAAGAATCCAGGGAGAAACAACCAAAGAAGTCTGGTAAAAAGGTGGGCTTAGGG
GTTGCCAATGAGGATGAAGTGTCAAGAGACGATCAAGATGGTAAGAAAAATAGAGGAAGA
GGCAAGAGCAATTTGAAGAAGGATTTAAATGGAGAGTTGTCTATTAAGGAAATGTTTTCT
TCTGCTAAATCCAATACAAAGTCCCAGAATAAAGAGGAAGGGCACTTGCTGGAAACTCCT
AGGACACAATCCAAGAGAAAACGAACTCCAGGGAAGGAGGCTTCTGGGTCACATGATGAT
AAAAGTCCTGGTGAAGAGCTAGTTGGTTCTAAGATTAAAGTTTGGTGGCCAGACGATGAA
ACGTTTTATGAAGGTGTTATTGATTCTTTCGATCCTAAAGAAAGCAAGCACAAGGTTTTA
TATGCTGATGGCGATGTAGAGGTACTGATTCTCAAAGAAGAACGGTACAAGCTTGTTGGA
CGTAACAGTGTTAAAAAAGATGGGGGAAAATCATCTGTTCTTACAAGCCCTGGTGCTTCT
ACTGATTTGCACCCAAAGAAGAGGGCAAAAACCAATTCAGATTCACTAAGCATGGAAATG
AAGTCAGATATTGCCTCAAAAGAGGTTGGAGGAACTTCAACTGGAAAATCCAAAGGTGAG
GCTGCAAAATCCAGTGGTAAGACCAAACGTGCTAAAGCTGGTGGCAAATCCAGAGACAAA
ACACCTGCAAATGTTAGAAAACTAGCGCATGACAATTCTGATAAATCAAAAGGTGAAACT
GGTAAAGTCCGATCTAAGGATTCTGCTGTCAGAACTCCTCGAAAGTCTAAGGATGGCTCA
CCCAAGACTAGCACTAAATCTAAAGATGGAACACCAAAGATGGCCGCCAAAACCAGGAGC
AAAAAACGAAACAAGTCCAATGCTAATGGAAGTACAAAAGCAAGCTCTGGTTCATTGAAG
GCTCTAGAAAGTGAGGAAACAAAAGTAGGGAAATCATCAGACTCAACTAAGGAACGGCAG
GCTGGGACAGTGAGCGGAAAGAAACGGCAGAGAAGAGTTAGTGGCTGA

Peptide Sequence

PEP ID

VIT_11s0037g00050.t01
PEP Infomation

pep chromosome:12X:11:7667139:7689127:-1 gene:VIT_11s0037g00050 transcript:VIT_11s0037g00050.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MAVTDKELEEQLVAAGEELLKPLPCVEELLSLLDKLESFLAKVEQSPSKSMQTAVCPAMK
ALVVKELLNHLDVDVRVVVASCISEITRITAPDAPYDDDQMKEIFELIVATFENLSDTSS
RSYPKRVSILETVAKVRSCVVMLDLECDSLIIKMFKHFLGTIRETHSDDVYSSMETIMTL
VLEESEEVSPELLAPLLDSLRVGNQDVLLIARKLGKKVIQNCALKLRPYMMQAVEFMGFP
LDNYYEIVASICQETSDAIKHNDANVSNECVDAKALAPDVSCSGGRDGTTNTSGKLVTSN
GTVQIGISDSLVNPVSPNKGLVQSHQINQSKGNDATIKAEPESDPVDVEKSETKSKQPTK
RRGRKSCSSTAKTETSGQSQIDSGKEALELLGPKSCVGEIGSSTSVDPSSNIADVPFQHE
KETTQIPSQEAGKNEMPNPLPSLSEGQPDGSASKRSQRRTKKKGSKNLEADLISTSVPMG
NLLQDQVEGEVPPSTTVLTKKEFERASDSETKRQKRTGKKALVENNDDEKTSTLGDDAIM
KKKESREKQPKKSGKKVGLGVANEDEVSRDDQDGKKNRGRGKSNLKKDLNGELSIKEMFS
SAKSNTKSQNKEEGHLLETPRTQSKRKRTPGKEASGSHDDKSPGEELVGSKIKVWWPDDE
TFYEGVIDSFDPKESKHKVLYADGDVEVLILKEERYKLVGRNSVKKDGGKSSVLTSPGAS
TDLHPKKRAKTNSDSLSMEMKSDIASKEVGGTSTGKSKGEAAKSSGKTKRAKAGGKSRDK
TPANVRKLAHDNSDKSKGETGKVRSKDSAVRTPRKSKDGSPKTSTKSKDGTPKMAAKTRS
KKRNKSNANGSTKASSGSLKALESEETKVGKSSDSTKERQAGTVSGKKRQRRVSG

Transcript Sequence

Transcript ID

VIT_11s0037g00050.t01
Transcript Infomation

cdna chromosome:12X:11:7667139:7689127:-1 gene:VIT_11s0037g00050 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

TAACAAGAGAGGAGAAGAAAAAAATTAAAAAGAACGCCTCAATCTCTCATTTCATGGCTA
CGGCCCCAACAATTTTATTAAAATGAACGCGTTTCCAAAAAACAGCTTCTCTGGGGCCAA
ACAACCGTTGGATTTGGTTTTGCAGTGGTGTAAGTGTATCTTGTGATTCTGATTCGTTTC
TAGGGTTTTATTGCTGGGGTGAGCCAAGGCTTAGGGGCTCTGGAGGGAGGGAGAAGATGG
CGGTTACGGACAAGGAGCTGGAAGAACAGCTCGTGGCTGCAGGAGAAGAGCTACTGAAGC
CTTTACCATGTGTGGAAGAACTTCTTAGTCTGCTTGACAAACTTGAGAGTTTTTTAGCAA
AGGTAGAGCAATCTCCATCAAAATCTATGCAAACTGCAGTATGCCCTGCAATGAAGGCAC
TTGTGGTGAAAGAACTGTTGAATCATTTGGATGTGGATGTGAGAGTTGTTGTTGCATCTT
GCATCAGTGAGATCACTAGAATAACAGCTCCAGATGCTCCTTACGATGATGACCAGATGA
AGGAAATTTTTGAGTTGATTGTAGCAACATTCGAAAATTTGTCTGATACTTCCAGTCGAT
CATATCCTAAGAGAGTTTCAATCCTTGAAACTGTTGCAAAGGTCAGATCATGCGTTGTCA
TGCTGGATCTTGAATGTGATTCCCTGATTATAAAGATGTTCAAACATTTCTTGGGAACTA
TAAGGGAAACCCACTCAGATGATGTCTATTCATCGATGGAGACCATTATGACCTTGGTCT
TAGAAGAAAGTGAAGAGGTTTCACCAGAGCTTCTTGCACCCCTCTTGGATAGTTTAAGGG
TTGGAAATCAGGATGTTTTGCTTATTGCACGGAAGCTGGGGAAGAAAGTAATTCAAAATT
GTGCCTTGAAACTTAGACCCTACATGATGCAAGCAGTAGAATTCATGGGTTTTCCCTTGG
ACAATTACTATGAAATTGTTGCTTCCATATGCCAGGAGACATCTGATGCTATAAAGCACA
ATGATGCTAATGTTTCTAATGAATGTGTGGATGCTAAAGCTCTTGCACCAGATGTTTCAT
GTTCTGGAGGGCGTGATGGCACAACAAACACATCAGGAAAATTGGTGACAAGCAATGGTA
CTGTTCAGATTGGGATTAGTGATTCTTTAGTTAATCCAGTTTCTCCTAACAAGGGGCTGG
TGCAATCCCATCAAATTAATCAGTCCAAAGGTAATGATGCAACAATCAAGGCTGAACCTG
AAAGTGATCCTGTGGATGTTGAAAAATCAGAAACAAAATCCAAGCAGCCCACAAAGAGAA
GGGGAAGGAAATCCTGCAGTTCGACTGCTAAAACAGAAACATCTGGCCAGTCTCAAATTG
ACAGCGGAAAAGAAGCTTTGGAACTTTTGGGACCGAAGAGCTGTGTTGGAGAGATTGGGA
GCTCAACTTCTGTTGACCCATCTTCCAACATTGCTGATGTTCCTTTTCAACATGAAAAGG
AAACCACTCAAATTCCCTCTCAAGAAGCTGGAAAAAATGAGATGCCAAACCCTTTGCCTT
CTTTGAGTGAGGGCCAGCCTGATGGAAGTGCTTCCAAAAGGAGCCAAAGAAGGACAAAGA
AGAAGGGAAGCAAGAATCTGGAAGCTGATCTGATTTCTACTTCAGTGCCAATGGGAAATT
TGTTGCAGGACCAGGTTGAGGGGGAAGTTCCACCCTCTACAACTGTCCTGACTAAAAAGG
AATTTGAGAGAGCAAGTGATTCAGAAACCAAAAGGCAGAAACGAACAGGTAAAAAGGCAC
TTGTTGAAAATAATGATGATGAGAAAACTTCAACCCTTGGAGATGATGCTATCATGAAGA
AGAAAGAATCCAGGGAGAAACAACCAAAGAAGTCTGGTAAAAAGGTGGGCTTAGGGGTTG
CCAATGAGGATGAAGTGTCAAGAGACGATCAAGATGGTAAGAAAAATAGAGGAAGAGGCA
AGAGCAATTTGAAGAAGGATTTAAATGGAGAGTTGTCTATTAAGGAAATGTTTTCTTCTG
CTAAATCCAATACAAAGTCCCAGAATAAAGAGGAAGGGCACTTGCTGGAAACTCCTAGGA
CACAATCCAAGAGAAAACGAACTCCAGGGAAGGAGGCTTCTGGGTCACATGATGATAAAA
GTCCTGGTGAAGAGCTAGTTGGTTCTAAGATTAAAGTTTGGTGGCCAGACGATGAAACGT
TTTATGAAGGTGTTATTGATTCTTTCGATCCTAAAGAAAGCAAGCACAAGGTTTTATATG
CTGATGGCGATGTAGAGGTACTGATTCTCAAAGAAGAACGGTACAAGCTTGTTGGACGTA
ACAGTGTTAAAAAAGATGGGGGAAAATCATCTGTTCTTACAAGCCCTGGTGCTTCTACTG
ATTTGCACCCAAAGAAGAGGGCAAAAACCAATTCAGATTCACTAAGCATGGAAATGAAGT
CAGATATTGCCTCAAAAGAGGTTGGAGGAACTTCAACTGGAAAATCCAAAGGTGAGGCTG
CAAAATCCAGTGGTAAGACCAAACGTGCTAAAGCTGGTGGCAAATCCAGAGACAAAACAC
CTGCAAATGTTAGAAAACTAGCGCATGACAATTCTGATAAATCAAAAGGTGAAACTGGTA
AAGTCCGATCTAAGGATTCTGCTGTCAGAACTCCTCGAAAGTCTAAGGATGGCTCACCCA
AGACTAGCACTAAATCTAAAGATGGAACACCAAAGATGGCCGCCAAAACCAGGAGCAAAA
AACGAAACAAGTCCAATGCTAATGGAAGTACAAAAGCAAGCTCTGGTTCATTGAAGGCTC
TAGAAAGTGAGGAAACAAAAGTAGGGAAATCATCAGACTCAACTAAGGAACGGCAGGCTG
GGACAGTGAGCGGAAAGAAACGGCAGAGAAGAGTTAGTGGCTGATGCAATGAGCCCAATG
GTTCTGAAAGTAATTTTGTTATTTTTTTTTCTGGTCTCTTGTTTTCATCTGGTAAATATA
TTCTCCATTTAAATTACGTTTAGTTGGGCATAGCATCAATCTGCAGAAGCTTTCAAGCAA
TTGCTGAAACCTGTATTTTTGTCTGACAGTCTGTAGAATGAAACTGTAAAATTCTGAAAG
TGTGCTCCTGATTTTCAGATGGCCGGCCCATGTTATATGGCACACATGAAGCCATGAGTA
GTGTGCTAGTTGATGTTGAAGCCTGTATATTTTAACCTGCTTTAACTGGAATAGCTTTGA
AAGAGAGTAAAGATCCTGAAAATA