Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0037g00040.t01
CDS Infomation

cds chromosome:12X:11:7656325:7659699:-1 gene:VIT_11s0037g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGCAAGCCATCAACTCTCTCCTAAACCCGTCTCAAATCTCTCTTCAAGACCTCCAAAAT
GGTCATCATCATCATCATCATCATCAACATCAGCAGCAGCAGCAGCATCAGCATCACCCC
CAGATCCCTAACCCTTCTCAGATTCAGCTTCCCAATACCCACTTCGATTCCTCTTCCCAT
GACGACTTTTTGGAGCAAATGCTCTCTACTCTCCCTTCTTGGTCTGACCTCCCCGCAAAC
CCTAAATCTCCCTGGGAACTCAATGCTTCCAACCCTATCTCCATGCCTTCCAACAAGTCT
AGGGATTTGTCCGACGATACCACGCCGTCTAATCCGGACAACGTTCAGTTCGCTTTCGAC
GAGTCCGCCATGTTGGCCTCCAAGCTCCGCCAGCACCAGATCAGCGGGAACTCGTCGGCG
GCCAAGTCGGCGTTGATGCTTCAGCAGCAGTTGCTTTTGTCACGAGGCGTCGCCATGGGT
AGGTCCCCGTCGAATGGGTCCGGCGCCGGTGAGTCCGGCCTTCTTCAACTGCCTTTGTCA
CTTAGCAACGGGGATTCTTGCCTCGTTGACCGATCACAAAACGACGTCGTTGATGGGTCC
TCCTCCTTCAAATCCCCCAATCAGGGAGGAGACGGTTCAGTTCAAGCTCTCTACAATGGC
TTCGCCGGAGCTCTTCACGGCTCCGGTCAAGCCTCCAACCAAGCTCAGAATTTCCACCAT
CCTCAGGGTGGATCAATGCAGGCACAGAACTACGGAGCTCCGGCGACTGTGATGAACCAG
ACACCGGCGACTGGCTCAGCGGGTGGTGCTCCAGCACAGCCCAGACAGAGGGTGAGGGCA
AGAAGGGGTCAGGCAACTGACCCACACAGCATCGCTGAGAGATTACGTAGAGAGAGAATT
GCAGAGAGAATGAAGGCACTGCAGGAACTGGTTCCCAATGCCAACAAGACGGACAAGGCT
TCAATGCTGGATGAGATCATTGACTATGTCAAATTCCTGCAGCTCCAAGTGAAGGTACTC
AGCATGAGCAGGTTGGGCGGTGCCGCAGCTGTTGCTCCCCTCGTTGCTGATATGTCCTCT
GAGGGAGGTGGTGACTGTATACAGGCTAGTGGGACAAGCGGCCCTACAGGAGGAAGGGCA
ACGAACGGAACACAAACAACCACATCAAACGACAGCCTCACAGTGACGGAGCACCAGGTG
GCCAAACTCATGGAGGAGGACATGGGTTCCGCCATGCAGTATCTTCAAGGCAAAGGCTTA
TGCCTTATGCCCATCTCCCTCGCCACTGCCATCTCCACCACTACCTGCCACTCCAGGAAC
CCCATGGTGGCTGCTGCCGCCGTCGCCGCCTCCAACATCAACAACGGCAGCCACACTCAC
CCACTCCTACCTAATTCCAACGCCGATGGCCCCTCCTCCCCCAGCATGTCCGTCCTGACC
GTGCAGTCAGCCACCATGGGGAACGGCCTGGCCGACGCGCCCGTAAAAGACGCTGCCTCC
GTTTCCAAGCCCTGA

Peptide Sequence

PEP ID

VIT_11s0037g00040.t01
PEP Infomation

pep chromosome:12X:11:7656325:7659699:-1 gene:VIT_11s0037g00040 transcript:VIT_11s0037g00040.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MQAINSLLNPSQISLQDLQNGHHHHHHHQHQQQQQHQHHPQIPNPSQIQLPNTHFDSSSH
DDFLEQMLSTLPSWSDLPANPKSPWELNASNPISMPSNKSRDLSDDTTPSNPDNVQFAFD
ESAMLASKLRQHQISGNSSAAKSALMLQQQLLLSRGVAMGRSPSNGSGAGESGLLQLPLS
LSNGDSCLVDRSQNDVVDGSSSFKSPNQGGDGSVQALYNGFAGALHGSGQASNQAQNFHH
PQGGSMQAQNYGAPATVMNQTPATGSAGGAPAQPRQRVRARRGQATDPHSIAERLRRERI
AERMKALQELVPNANKTDKASMLDEIIDYVKFLQLQVKVLSMSRLGGAAAVAPLVADMSS
EGGGDCIQASGTSGPTGGRATNGTQTTTSNDSLTVTEHQVAKLMEEDMGSAMQYLQGKGL
CLMPISLATAISTTTCHSRNPMVAAAAVAASNINNGSHTHPLLPNSNADGPSSPSMSVLT
VQSATMGNGLADAPVKDAASVSKP

Transcript Sequence

Transcript ID

VIT_11s0037g00040.t01
Transcript Infomation

cdna chromosome:12X:11:7656325:7659699:-1 gene:VIT_11s0037g00040 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ACAACCTCTTTTTGATTATCATATTGCATTCCTCCCATGTCTTCTTCTTCTTCTTCCTCC
TCCTCTTCTTCTTCTCCTTCTTCCTTTTCTTCTTCCTCCCACTTTCCCTTCAACTAAACC
TCAAACCCCCCAAACTCCACATCCTCGCCAATTCCTCTCTCTCTCTCCGGAATCTCTCCA
ATCCTCGTTTTTTTTTTTCTTTCTAAAGATACTATGCAGCCTTGTAGTAGAGAAATGCAA
GCCATCAACTCTCTCCTAAACCCGTCTCAAATCTCTCTTCAAGACCTCCAAAATGGTCAT
CATCATCATCATCATCATCAACATCAGCAGCAGCAGCAGCATCAGCATCACCCCCAGATC
CCTAACCCTTCTCAGATTCAGCTTCCCAATACCCACTTCGATTCCTCTTCCCATGACGAC
TTTTTGGAGCAAATGCTCTCTACTCTCCCTTCTTGGTCTGACCTCCCCGCAAACCCTAAA
TCTCCCTGGGAACTCAATGCTTCCAACCCTATCTCCATGCCTTCCAACAAGTCTAGGGAT
TTGTCCGACGATACCACGCCGTCTAATCCGGACAACGTTCAGTTCGCTTTCGACGAGTCC
GCCATGTTGGCCTCCAAGCTCCGCCAGCACCAGATCAGCGGGAACTCGTCGGCGGCCAAG
TCGGCGTTGATGCTTCAGCAGCAGTTGCTTTTGTCACGAGGCGTCGCCATGGGTAGGTCC
CCGTCGAATGGGTCCGGCGCCGGTGAGTCCGGCCTTCTTCAACTGCCTTTGTCACTTAGC
AACGGGGATTCTTGCCTCGTTGACCGATCACAAAACGACGTCGTTGATGGGTCCTCCTCC
TTCAAATCCCCCAATCAGGGAGGAGACGGTTCAGTTCAAGCTCTCTACAATGGCTTCGCC
GGAGCTCTTCACGGCTCCGGTCAAGCCTCCAACCAAGCTCAGAATTTCCACCATCCTCAG
GGTGGATCAATGCAGGCACAGAACTACGGAGCTCCGGCGACTGTGATGAACCAGACACCG
GCGACTGGCTCAGCGGGTGGTGCTCCAGCACAGCCCAGACAGAGGGTGAGGGCAAGAAGG
GGTCAGGCAACTGACCCACACAGCATCGCTGAGAGATTACGTAGAGAGAGAATTGCAGAG
AGAATGAAGGCACTGCAGGAACTGGTTCCCAATGCCAACAAGACGGACAAGGCTTCAATG
CTGGATGAGATCATTGACTATGTCAAATTCCTGCAGCTCCAAGTGAAGGTACTCAGCATG
AGCAGGTTGGGCGGTGCCGCAGCTGTTGCTCCCCTCGTTGCTGATATGTCCTCTGAGGGA
GGTGGTGACTGTATACAGGCTAGTGGGACAAGCGGCCCTACAGGAGGAAGGGCAACGAAC
GGAACACAAACAACCACATCAAACGACAGCCTCACAGTGACGGAGCACCAGGTGGCCAAA
CTCATGGAGGAGGACATGGGTTCCGCCATGCAGTATCTTCAAGGCAAAGGCTTATGCCTT
ATGCCCATCTCCCTCGCCACTGCCATCTCCACCACTACCTGCCACTCCAGGAACCCCATG
GTGGCTGCTGCCGCCGTCGCCGCCTCCAACATCAACAACGGCAGCCACACTCACCCACTC
CTACCTAATTCCAACGCCGATGGCCCCTCCTCCCCCAGCATGTCCGTCCTGACCGTGCAG
TCAGCCACCATGGGGAACGGCCTGGCCGACGCGCCCGTAAAAGACGCTGCCTCCGTTTCC
AAGCCCTGATCACCTGCCGCACTTACTTTACTAGATGTCGGCCGTCAAAGTCTAGGGAAA
TAAGGTGGTGGTGGTGTTGTGACGAGACTAGCTTATTTACGTAGACTTTGGCTCTTCTCA
TCAGCTAAGCTAACTACTACTAGTAAGTAGTATTGAGTATCACAACAATACCCTAGTCCC
TAGTCCCTAGTCCCTTTTCCTACTAATTATCATCATTACTTTTGTTTTTTTTCTTTCTTT
CTTTTTTAATTAAATTCAAGTTTTGATGATATTTATTATTTTTGTAAGTGTAAGCCATGA
ATATGATGTATGCCGATGTCTGATGTGGTATTTAGCAGCTCGGATGAAGCTGCCCGTTAC
TAATAATAGTAATAAAACTATTATATGATAA