Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05910.t01
CDS Infomation

cds chromosome:12X:11:5526240:5536140:-1 gene:VIT_11s0016g05910 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGCATGCGACGACCTCAAGGAAGAGGTTTGGAGTTAGCAAGAAAGCATATTGCCTCC
TGCTTATCAGAGCTAGAATGCATTTATAAATCAGCTGAATTCCTTAGGTCTAGTGCATGT
GGAAATTGTGAAGATGGTATAGAAGATAAAACGACAGCCTCTGGTTGTGAACCAATTGGA
TTCGATGCAAGTTTAAACAGTAGGTTATCTGCTCCTACCCCACCACGTGCCATTAGAATT
CTTAACTGGAAAAAGGCAATTGAATACTTCAAGAAACTTCTTCATCATTTAGACATTATT
TGTTCCTATTCTTTGGACCCCTCGTTAGAAGCTGTTTTGCGCTTTGTGGTGCAATTCCAG
AAGCCTCAGCCTGATTTGGTTGCAAGAGCTCATCTCCAGCTTCTTTTGGTTCAAGATGGA
AAACTATACGGACGAGATCCTATCTTTGCTGTGATTTGTAGAGCTGCAGCATTGCCTGAA
GTTGTGAAGAACCATGATATTCAAAAGAATGAATTTGTTGTGCAATTAGGGCAGTTAGTG
ATCAATTTGCTTAAAATCCTGTGTACAAATGCTGCATGGCAAAGGCGTAAGCTTGGGAAA
ATTTTACAAGATTGGCGTGTTATCTATGTACAGTTAGAACTAGCTTTCAAAACGGAGTTT
GGAGAAATGTCAAGCATTACAAATGAAGAGAATGTGTGCGTAAAATTATCCAAACACATC
CTCATTTGGGTAGAGGAGCAAACATATTGGATAGCTTCTCGTTTTCTCATGTTGGGGTTT
GAACTGGAACTGTATTCCCCCAGTGAATATTGCATGGTATACTGGTATATTTATGTGGTC
TTGATCAAGCTTGCAGAGAAACATCATCTTAAGATGGTGATGAGCAATGACACTGGTAAA
CGGAAAGGGAAGAAAAAGAGGGATTCCCCAAAAGATGTGGCGAGGGATTACCAGATCCCA
CCTGCGGTCTTGTTTCTCCAGTGCCATATATCTCTTGCTGAAGGGCTCACAATGTTGCTT
GCTGCTCTGAGGAATGAAAACAGGGTTTTTCAAAGTTTGGGCCCTTTCAATACTGAGCAT
GAGATATTCATTCAACACTTTGAGCTTCTACAGCAAGCCTGCATTCCTGATCACATTTCA
TACCTCTCATTCAAGGATACTACAGCCTATGCTCAATTCTCTACCCTAGTCATGTACAAT
TACTTCAAAGATGCTCTGAGGCTTGCAAAGGAGCTTAGAAGTAGTTTCTCCAATGACCCA
GACAGAATGGCTGAACTCCGAAAGATAGAGCAGGTTGCAGAACACAATGGCATAGCTCTA
AACGTCATCTGCCGGGTAGGAGCCCTCGACCCATCCCTGAAAGTCTCCTTTGAGTTCAAC
CACCATCCTTACTTTGCTACCGCCGTTGTGAGGAGGTCTTGA

Peptide Sequence

PEP ID

VIT_11s0016g05910.t01
PEP Infomation

pep chromosome:12X:11:5526240:5536140:-1 gene:VIT_11s0016g05910 transcript:VIT_11s0016g05910.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MCMRRPQGRGLELARKHIASCLSELECIYKSAEFLRSSACGNCEDGIEDKTTASGCEPIG
FDASLNSRLSAPTPPRAIRILNWKKAIEYFKKLLHHLDIICSYSLDPSLEAVLRFVVQFQ
KPQPDLVARAHLQLLLVQDGKLYGRDPIFAVICRAAALPEVVKNHDIQKNEFVVQLGQLV
INLLKILCTNAAWQRRKLGKILQDWRVIYVQLELAFKTEFGEMSSITNEENVCVKLSKHI
LIWVEEQTYWIASRFLMLGFELELYSPSEYCMVYWYIYVVLIKLAEKHHLKMVMSNDTGK
RKGKKKRDSPKDVARDYQIPPAVLFLQCHISLAEGLTMLLAALRNENRVFQSLGPFNTEH
EIFIQHFELLQQACIPDHISYLSFKDTTAYAQFSTLVMYNYFKDALRLAKELRSSFSNDP
DRMAELRKIEQVAEHNGIALNVICRVGALDPSLKVSFEFNHHPYFATAVVRRS

Transcript Sequence

Transcript ID

VIT_11s0016g05910.t01
Transcript Infomation

cdna chromosome:12X:11:5526240:5536140:-1 gene:VIT_11s0016g05910 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTGCATGCGACGACCTCAAGGAAGAGGTTTGGAGTTAGCAAGAAAGCATATTGCCTCC
TGCTTATCAGAGCTAGAATGCATTTATAAATCAGCTGAATTCCTTAGGTCTAGTGCATGT
GGAAATTGTGAAGATGGTATAGAAGATAAAACGACAGCCTCTGGTTGTGAACCAATTGGA
TTCGATGCAAGTTTAAACAGTAGGTTATCTGCTCCTACCCCACCACGTGCCATTAGAATT
CTTAACTGGAAAAAGGCAATTGAATACTTCAAGAAACTTCTTCATCATTTAGACATTATT
TGTTCCTATTCTTTGGACCCCTCGTTAGAAGCTGTTTTGCGCTTTGTGGTGCAATTCCAG
AAGCCTCAGCCTGATTTGGTTGCAAGAGCTCATCTCCAGCTTCTTTTGGTTCAAGATGGA
AAACTATACGGACGAGATCCTATCTTTGCTGTGATTTGTAGAGCTGCAGCATTGCCTGAA
GTTGTGAAGAACCATGATATTCAAAAGAATGAATTTGTTGTGCAATTAGGGCAGTTAGTG
ATCAATTTGCTTAAAATCCTGTGTACAAATGCTGCATGGCAAAGGCGTAAGCTTGGGAAA
ATTTTACAAGATTGGCGTGTTATCTATGTACAGTTAGAACTAGCTTTCAAAACGGAGTTT
GGAGAAATGTCAAGCATTACAAATGAAGAGAATGTGTGCGTAAAATTATCCAAACACATC
CTCATTTGGGTAGAGGAGCAAACATATTGGATAGCTTCTCGTTTTCTCATGTTGGGGTTT
GAACTGGAACTGTATTCCCCCAGTGAATATTGCATGGTATACTGGTATATTTATGTGGTC
TTGATCAAGCTTGCAGAGAAACATCATCTTAAGATGGTGATGAGCAATGACACTGGTAAA
CGGAAAGGGAAGAAAAAGAGGGATTCCCCAAAAGATGTGGCGAGGGATTACCAGATCCCA
CCTGCGGTCTTGTTTCTCCAGTGCCATATATCTCTTGCTGAAGGGCTCACAATGTTGCTT
GCTGCTCTGAGGAATGAAAACAGGGTTTTTCAAAGTTTGGGCCCTTTCAATACTGAGCAT
GAGATATTCATTCAACACTTTGAGCTTCTACAGCAAGCCTGCATTCCTGATCACATTTCA
TACCTCTCATTCAAGGATACTACAGCCTATGCTCAATTCTCTACCCTAGTCATGTACAAT
TACTTCAAAGATGCTCTGAGGCTTGCAAAGGAGCTTAGAAGTAGTTTCTCCAATGACCCA
GACAGAATGGCTGAACTCCGAAAGATAGAGCAGGTTGCAGAACACAATGGCATAGCTCTA
AACGTCATCTGCCGGGTAGGAGCCCTCGACCCATCCCTGAAAGTCTCCTTTGAGTTCAAC
CACCATCCTTACTTTGCTACCGCCGTTGTGAGGAGGTCTTGAAGGTGCTTTTTCATCATC
TCCCATCAATTTTGAAAACCCTTATAGGTTCCCAAAGCATTTGTAACATTCTATTTTTAT
CCGATTAATTTTCCCAAGCTATTTATTGAATGAATGTGTAATTCGCAGAGGAAGAAATAA
GCAATGTTGTTGATGTGAACTCAGAATCATTTATTGAGAAAGAATATATTAAAAACTGAG
TTATAGAG