Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05720.t01
CDS Infomation

cds chromosome:12X:11:5210804:5215513:-1 gene:VIT_11s0016g05720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGAGAAGAATTGTGGGTGCTGGGCTGTTCTTAAACGCGGTGTTAGAGGTTCCTGCAAG
TCCTCTGCTTCTAGGGATTCTGTTAACACTATTCCTCGGACCAGTCTCGTTTATGATGCT
GCCACTGAGACGCGATATCTAAACGCAAGTAACCGGGAGCTCTATGCTCCGAATGAAGCT
CAGCTCTCTTCCGATAATCCCAATCCATCAGCAACTGAAAACAAAGATGTGTGCCAGCTG
CTACAATTTACTTTCCAGGAGCTAAAGTCTGCAACAGGAAACTTCAGGCCGGATAGTATT
CTTGGGGAAGGTGGATTTGGATATGTCTTCAAAGGATGGATAGAGGAGAATGGGACAGCA
CCTGCAAAACCTGGGTCAGGGATTACAGTGGCTGTCAAAAGTTTGAAGCCAGATGGTCTT
CAAGGCCATAGAGAATGGGTGGCTGAGGTAGGCTTCCTTGGACAGCTTCACCACCCTAAT
CTTGTTAAACTTATTGGGTACTGCATTGAAGATGATCAGCGACTGCTTGTTTATGAATTT
ATGACCCGTGGAAGCCTTGAAAATCACCTTTTCAGAAGGACCATACCTCTTCCATGGTCC
AACAGGATTAAGATTGCACTTGGTGCAGCAAAAGGGCTGGCCTTTCTCCACGAGGGTCCT
GAACCTGTTATTTACAGGGACTTCAAGACGTCCAACATTTTACTTGATTCGGAATATAAT
GCAAAGCTTTCAGATTTCGGTCTGGCAAAAGCTGGCCCTCAGGAAGGTGACACACATGTT
TCAACAAGGGTTGTTGGAACATATGGCTATGCTGCTCCCGAATATGTGAGGACAGGACAC
TTGACATCTAAGAGCGATGTTTACAGCTTTGGGGTTGTGCTACTTGAGATTTTAACTGGT
AGAAGATCAATGGACAAGAAACGCCCTCGCGGAGAACAGAATCTTGTTGCATGGGCTAGG
CCTTATTTGGCTGACAAGCGAAAGCTTTACCAAATAGTTGATCCCCGCCTGGAACTGAAT
TACTCCCTTAAAGGGGTGCAGAAAGTCTCTCAGTTAGCTTACAACTGCCTCAGTGCGGAC
CCCAAATCCCGCCCTTGCATGGATGAAGTTGTAAAGGTTCTCACTCCGTTGCAAGACCTC
AACGACCTTGCCATCCTATCTTATCACTCCCGCTTATCTCAGCAAGGGCGACGCAAGAAG
AAACCGGATGGAACTCCACAGGTCACCTACAACCAGTCCAAAAGCATGAGAGGCTCTCCA
TTGAACACTGGTAAGCAGCATTGTAGATAA

Peptide Sequence

PEP ID

VIT_11s0016g05720.t01
PEP Infomation

pep chromosome:12X:11:5210804:5215513:-1 gene:VIT_11s0016g05720 transcript:VIT_11s0016g05720.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MEKNCGCWAVLKRGVRGSCKSSASRDSVNTIPRTSLVYDAATETRYLNASNRELYAPNEA
QLSSDNPNPSATENKDVCQLLQFTFQELKSATGNFRPDSILGEGGFGYVFKGWIEENGTA
PAKPGSGITVAVKSLKPDGLQGHREWVAEVGFLGQLHHPNLVKLIGYCIEDDQRLLVYEF
MTRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHEGPEPVIYRDFKTSNILLDSEYN
AKLSDFGLAKAGPQEGDTHVSTRVVGTYGYAAPEYVRTGHLTSKSDVYSFGVVLLEILTG
RRSMDKKRPRGEQNLVAWARPYLADKRKLYQIVDPRLELNYSLKGVQKVSQLAYNCLSAD
PKSRPCMDEVVKVLTPLQDLNDLAILSYHSRLSQQGRRKKKPDGTPQVTYNQSKSMRGSP
LNTGKQHCR

Transcript Sequence

Transcript ID

VIT_11s0016g05720.t01
Transcript Infomation

cdna chromosome:12X:11:5210804:5215513:-1 gene:VIT_11s0016g05720 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATATCCATGGCAGAATTTCCTCTTCTTCTCATCTCTCCTTCTCTTTCTCATCCCCACCGA
TTATAGTAACACCCCATGAAAGGTAGAGCCACTGCGTAGGCATGGAGAAGAATTGTGGGT
GCTGGGCTGTTCTTAAACGCGGTGTTAGAGGTTCCTGCAAGTCCTCTGCTTCTAGGGATT
CTGTTAACACTATTCCTCGGACCAGTCTCGTTTATGATGCTGCCACTGAGACGCGATATC
TAAACGCAAGTAACCGGGAGCTCTATGCTCCGAATGAAGCTCAGCTCTCTTCCGATAATC
CCAATCCATCAGCAACTGAAAACAAAGATGTGTGCCAGCTGCTACAATTTACTTTCCAGG
AGCTAAAGTCTGCAACAGGAAACTTCAGGCCGGATAGTATTCTTGGGGAAGGTGGATTTG
GATATGTCTTCAAAGGATGGATAGAGGAGAATGGGACAGCACCTGCAAAACCTGGGTCAG
GGATTACAGTGGCTGTCAAAAGTTTGAAGCCAGATGGTCTTCAAGGCCATAGAGAATGGG
TGGCTGAGGTAGGCTTCCTTGGACAGCTTCACCACCCTAATCTTGTTAAACTTATTGGGT
ACTGCATTGAAGATGATCAGCGACTGCTTGTTTATGAATTTATGACCCGTGGAAGCCTTG
AAAATCACCTTTTCAGAAGGACCATACCTCTTCCATGGTCCAACAGGATTAAGATTGCAC
TTGGTGCAGCAAAAGGGCTGGCCTTTCTCCACGAGGGTCCTGAACCTGTTATTTACAGGG
ACTTCAAGACGTCCAACATTTTACTTGATTCGGAATATAATGCAAAGCTTTCAGATTTCG
GTCTGGCAAAAGCTGGCCCTCAGGAAGGTGACACACATGTTTCAACAAGGGTTGTTGGAA
CATATGGCTATGCTGCTCCCGAATATGTGAGGACAGGACACTTGACATCTAAGAGCGATG
TTTACAGCTTTGGGGTTGTGCTACTTGAGATTTTAACTGGTAGAAGATCAATGGACAAGA
AACGCCCTCGCGGAGAACAGAATCTTGTTGCATGGGCTAGGCCTTATTTGGCTGACAAGC
GAAAGCTTTACCAAATAGTTGATCCCCGCCTGGAACTGAATTACTCCCTTAAAGGGGTGC
AGAAAGTCTCTCAGTTAGCTTACAACTGCCTCAGTGCGGACCCCAAATCCCGCCCTTGCA
TGGATGAAGTTGTAAAGGTTCTCACTCCGTTGCAAGACCTCAACGACCTTGCCATCCTAT
CTTATCACTCCCGCTTATCTCAGCAAGGGCGACGCAAGAAGAAACCGGATGGAACTCCAC
AGGTCACCTACAACCAGTCCAAAAGCATGAGAGGCTCTCCATTGAACACTGGTAAGCAGC
ATTGTAGATAATGGGTAGTCAATTCCTGGCCCAAATTTCAGTTGAAACAAATGTTGAGAT
GCCACCTCTATAGAAATGGGTTGTGTGAAGACAATATTTCAAGTTTTTGGTATAATTTTT
TGGGTGTTTGAGATTCGCCAAAAGGAAAATGGAAGAGGAAACGTGCATCATTTTCCTTTT
CTTTAATAGAGTTGAGAGCTAACTGTTATTGTGGATCAATCGTTGCCATTTTCCAGTGCT
GTAACTGAGATATATCATTGTAATTAGATAAGTCCTTGCATTTCCAAGATTGTTATTTGC
AGCTTCTTTAATGTCTACTGCTTTGAGTATTGGGAATT