Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05640.t01
CDS Infomation

cds chromosome:12X:11:5095999:5097491:-1 gene:VIT_11s0016g05640 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7TC45]
Sequence

ATGATCAGCGGCAGGAGCAACAAAAAACGTGGGTTCATTGAAGCCTTTGAGCTCCCACCT
CAGACGTTGCCTCTTCTTCTTTGGAACGATCACCCGAACGACGACGACGACGATGATGAT
CGTAAAGGAGTGGAGAACAGCTCCTTCATTGCTAAAAAAAATGATGATGGATATTGTATT
GTGGGTTGGCCGCCGATCAAATTCCGGAGGAAGAAGATTTGTTCCCACAACAGAGACGAC
AATGACCGGACAGTACTGCATAATGGCAGCGCCAGAGCCGGCGTCGGCGGCGGTGTAAAC
CCCAACTCTAAGTACGTGAAAGTGAAGATGGTGGGAGTGGGAATAGCTAGGAAGATTGAC
TTGAGCCGCCATCACTCGTACCAAACGCTCACAAACACCTTGATCAACATGTTTGGCAAG
TGCCAACAAGATGCACAGAGCTTTAAACTCGCCTATCAGGATAGAGAAGGAGACTGGCTG
CTTGCAGGAGATGTGCCCTGGAGAACATTCATTCAGTCGGTGGAGCGTCTGAAAATACTA
AGGATTGGCGGTTAA

Peptide Sequence

PEP ID

VIT_11s0016g05640.t01
PEP Infomation

pep chromosome:12X:11:5095999:5097491:-1 gene:VIT_11s0016g05640 transcript:VIT_11s0016g05640.t01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7TC45]
Sequence

MISGRSNKKRGFIEAFELPPQTLPLLLWNDHPNDDDDDDDRKGVENSSFIAKKNDDGYCI
VGWPPIKFRRKKICSHNRDDNDRTVLHNGSARAGVGGGVNPNSKYVKVKMVGVGIARKID
LSRHHSYQTLTNTLINMFGKCQQDAQSFKLAYQDREGDWLLAGDVPWRTFIQSVERLKIL
RIGG

Transcript Sequence

Transcript ID

VIT_11s0016g05640.t01
Transcript Infomation

cdna chromosome:12X:11:5095999:5097491:-1 gene:VIT_11s0016g05640 gene_biotype:protein_coding transcript_biotype:protein_coding description:Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:D7TC45]
Sequence

TTTTTATTCACTCTTCTTTGTTTGTTACTGTTATTTGAGAGTCATGGAGCTTCAACTTGG
CCTCGCTCTTCCAACCTCACCCGTCAATGACTTCGATCTTAACTGCCATGTCTCCGACCC
CACGGAGGCGGCTTCTTCAGACCTTTGCGGCCGTGGAGATGATATGATCAGCGGCAGGAG
CAACAAAAAACGTGGGTTCATTGAAGCCTTTGAGCTCCCACCTCAGACGTTGCCTCTTCT
TCTTTGGAACGATCACCCGAACGACGACGACGACGATGATGATCGTAAAGGAGTGGAGAA
CAGCTCCTTCATTGCTAAAAAAAATGATGATGGATATTGTATTGTGGGTTGGCCGCCGAT
CAAATTCCGGAGGAAGAAGATTTGTTCCCACAACAGAGACGACAATGACCGGACAGTACT
GCATAATGGCAGCGCCAGAGCCGGCGTCGGCGGCGGTGTAAACCCCAACTCTAAGTACGT
GAAAGTGAAGATGGTGGGAGTGGGAATAGCTAGGAAGATTGACTTGAGCCGCCATCACTC
GTACCAAACGCTCACAAACACCTTGATCAACATGTTTGGCAAGTGCCAACAAGATGCACA
GAGCTTTAAACTCGCCTATCAGGATAGAGAAGGAGACTGGCTGCTTGCAGGAGATGTGCC
CTGGAGAACATTCATTCAGTCGGTGGAGCGTCTGAAAATACTAAGGATTGGCGGTTAATT
CAGTTGGGAAGGCTGGTAGAGAAATTGACTGGTTTAACAAGAGTTTAATTTGCCTTCAAT
TCTGAATAGTTGTATGTAAGGTGTAGACCAGCTTTAATTAGCTACATAACATGTGGATTT
TCATCTAAGCTAGAGAAGCTATATATATATATATATAGAGAGAGATATATATTCCTCTAA