Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05600.t01
CDS Infomation

cds chromosome:12X:11:5028877:5036567:-1 gene:VIT_11s0016g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGTTCGCCCTCCGAGTCCACTCAGTGGACGACAACCACCCTCTCTCCATCTCCTCAAAC
CCTAACCCTAACTTGGGCGAGCGCAGAGGCATGGTCCATCTCTTCCGCAGCCTCTCACTC
GCCACCGCCTTGCCACGCACTACCTCTCGAACCACTCTCCTCTTCGTTGTCGCTGTCCCA
AACTACCTCTCTTCCGATGATTTCATACGCTTCTGTGGCTCCCACATCGATGAGGTCTCT
GAGCTCCTCGTCATCAGAAACGATGCTGTGGAGGATCGGTACAGTGTTGTAATCAAATTT
ATGAATCAGTTATATGCGGATGCTTTTTATTGCATTTTCAACGGGAAGCGGTTTTCACCT
GGGGAGGCTGAGGTATGCCATCTTCTGTTTATGCTATCAGCAGAATACACTGAATCGGCA
GACTTTGCCTGTACACCTCCGCCTGGGTTCACAGAGTTACCCACTTGTCCAGTCTGTCTT
GAGAGATTGGACCAAGACACCAGTGGAATACTGAATACGCTTTGTGACCACTCATTTCAA
TGTCCTTGCATTTCAAAACGGACCAATTTGTCTTGTCAGGTCTGTCAATTTTGTCAGCAG
CAGGATGAGAAACCTACATGCTTTGTTTGTGGAACATCAGAAAATCTTTGGGTTTGCATG
ATATGTGGTTTTGCAGGATGCGGAAGATATAAAGAAGGCCATGCTATTAGACACTGGAAA
GATGCGCAACATTCCTATTCCCTTGACTTAGAAAAACAACAGGTTTGGGATTATGTTGGT
GATAGTTTTGTTCATCGATTAAACCAGTCAAAAGCTGATGGCAAGTTGGCAATGATGGAC
TCTCGCTGTATGTCAACTGAAGGAGATTGTGGTACATACGGGTGTACAGATGATTCTGGA
ATTAGTGCGGCCCTTTTCAGCAGCAAAGTTGAAGCAATTGTGGATGAATACAACCATCTT
CTTGCAACTGAGATGGAAACTCAAAGACAATATTATGAATCTCTACTTTTGGAAGCCAAA
GCTAAGAGGGAGAGTTCTGTTTTAGAAGCAGTGGAGAAAGCTGTGACTTCGAAAATGCAG
GATATCCAGAATGAACTGGAAAAATGTTTGGAGGAAAAAAAGGCTGTCTCAGATATCAAT
CAGAAACTTATAAAGAACCAAGATCTTTGTCGGAAAAAGGTCAAGGAAATTGAAGAGAGA
GAAATTTTGGCAATAAGGTCTAAGGATGAAAAGATACTTGATTTGGAAGAACAGATTAGG
GATCTTACAGTTTACATTGAAGCCCAAAAAACACTCCATCACATGACTGATTCTAATGAC
ATCAAGGGGGGAACACTCTTACCAGTACCTTCAAACCAATCTTCTTCAACCAACACCAAA
AGGCACTCAAAATCAAACCGAAGACGACATTAG

Peptide Sequence

PEP ID

VIT_11s0016g05600.t01
PEP Infomation

pep chromosome:12X:11:5028877:5036567:-1 gene:VIT_11s0016g05600 transcript:VIT_11s0016g05600.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MFALRVHSVDDNHPLSISSNPNPNLGERRGMVHLFRSLSLATALPRTTSRTTLLFVVAVP
NYLSSDDFIRFCGSHIDEVSELLVIRNDAVEDRYSVVIKFMNQLYADAFYCIFNGKRFSP
GEAEVCHLLFMLSAEYTESADFACTPPPGFTELPTCPVCLERLDQDTSGILNTLCDHSFQ
CPCISKRTNLSCQVCQFCQQQDEKPTCFVCGTSENLWVCMICGFAGCGRYKEGHAIRHWK
DAQHSYSLDLEKQQVWDYVGDSFVHRLNQSKADGKLAMMDSRCMSTEGDCGTYGCTDDSG
ISAALFSSKVEAIVDEYNHLLATEMETQRQYYESLLLEAKAKRESSVLEAVEKAVTSKMQ
DIQNELEKCLEEKKAVSDINQKLIKNQDLCRKKVKEIEEREILAIRSKDEKILDLEEQIR
DLTVYIEAQKTLHHMTDSNDIKGGTLLPVPSNQSSSTNTKRHSKSNRRRH

Transcript Sequence

Transcript ID

VIT_11s0016g05600.t01
Transcript Infomation

cdna chromosome:12X:11:5028877:5036567:-1 gene:VIT_11s0016g05600 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

CGGAGTTTGTCTTGATTCAACCCGGGCGCCATGTTCGCCCTCCGAGTCCACTCAGTGGAC
GACAACCACCCTCTCTCCATCTCCTCAAACCCTAACCCTAACTTGGGCGAGCGCAGAGGC
ATGGTCCATCTCTTCCGCAGCCTCTCACTCGCCACCGCCTTGCCACGCACTACCTCTCGA
ACCACTCTCCTCTTCGTTGTCGCTGTCCCAAACTACCTCTCTTCCGATGATTTCATACGC
TTCTGTGGCTCCCACATCGATGAGGTCTCTGAGCTCCTCGTCATCAGAAACGATGCTGTG
GAGGATCGGTACAGTGTTGTAATCAAATTTATGAATCAGTTATATGCGGATGCTTTTTAT
TGCATTTTCAACGGGAAGCGGTTTTCACCTGGGGAGGCTGAGGTATGCCATCTTCTGTTT
ATGCTATCAGCAGAATACACTGAATCGGCAGACTTTGCCTGTACACCTCCGCCTGGGTTC
ACAGAGTTACCCACTTGTCCAGTCTGTCTTGAGAGATTGGACCAAGACACCAGTGGAATA
CTGAATACGCTTTGTGACCACTCATTTCAATGTCCTTGCATTTCAAAACGGACCAATTTG
TCTTGTCAGGTCTGTCAATTTTGTCAGCAGCAGGATGAGAAACCTACATGCTTTGTTTGT
GGAACATCAGAAAATCTTTGGGTTTGCATGATATGTGGTTTTGCAGGATGCGGAAGATAT
AAAGAAGGCCATGCTATTAGACACTGGAAAGATGCGCAACATTCCTATTCCCTTGACTTA
GAAAAACAACAGGTTTGGGATTATGTTGGTGATAGTTTTGTTCATCGATTAAACCAGTCA
AAAGCTGATGGCAAGTTGGCAATGATGGACTCTCGCTGTATGTCAACTGAAGGAGATTGT
GGTACATACGGGTGTACAGATGATTCTGGAATTAGTGCGGCCCTTTTCAGCAGCAAAGTT
GAAGCAATTGTGGATGAATACAACCATCTTCTTGCAACTGAGATGGAAACTCAAAGACAA
TATTATGAATCTCTACTTTTGGAAGCCAAAGCTAAGAGGGAGAGTTCTGTTTTAGAAGCA
GTGGAGAAAGCTGTGACTTCGAAAATGCAGGATATCCAGAATGAACTGGAAAAATGTTTG
GAGGAAAAAAAGGCTGTCTCAGATATCAATCAGAAACTTATAAAGAACCAAGATCTTTGT
CGGAAAAAGGTCAAGGAAATTGAAGAGAGAGAAATTTTGGCAATAAGGTCTAAGGATGAA
AAGATACTTGATTTGGAAGAACAGATTAGGGATCTTACAGTTTACATTGAAGCCCAAAAA
ACACTCCATCACATGACTGATTCTAATGACATCAAGGGGGGAACACTCTTACCAGTACCT
TCAAACCAATCTTCTTCAACCAACACCAAAAGGCACTCAAAATCAAACCGAAGACGACAT
TAGACGGTTCCTCCCTCTCTCTCATATTGTGTACAGTTAACATGAATGCTTGTTTGGCTA
AAGAATCTGCGGCCCATGTTATGTACCCTTAATAAGGGCAGTCATTACTTGTTTTT