Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05580.t01
CDS Infomation

cds chromosome:12X:11:4977221:4984421:-1 gene:VIT_11s0016g05580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGGCAAGCTCAGTGGAGAAAGATGAAGTGGTTTCTTTGGAACTGCCGGCTCCTCCTGGA
TGGAAGAAAAAGTTCATGCCTAAGAGAGGTTTAACCCCCAAGAAAAATGAGATTATATTC
ACTTCCCCAACTGGAGAGGAAATCAATAGTAAAAGGCAGTTGGAACAATACCTGAAATCA
CACCCTGGTGGCCCAGCAATACAAGAGTTTGATTGGGGCACTGGTGAGACCCCAAGGAGA
TCAGCAAGGATTAGTGAGAAAGCAAAGGCAACTCCACCAAGAGAACTTGAGCCTGCCAAG
AAGCGAAGCAGAAAATCATCAGCTTCAAAGAAGGATAACAAGGAAACAGAAACCATTCCT
GATGAAACTGAGACAAAAGAAGTTCACATGCAAGAAGCTAAAAAAACTGAGGATAATGCG
GAGGCAGAAATTCAGAAAGATGTTGTGAATGAAAATCTCATTGAGACTAAAGATAAAGCA
GAAGATGTCAATACTAAAACAGAAGAAGCTCCTCCTGAAGGAACTCAAGTTGAGCAAGAT
GTTAAAATACCTGATGATGCTGAAGAAGGCAAAAAGAATGCAGAAAAAGAGCCTGGTGAG
AAGGGTGGTGATTCTGAAGTAGCTCAAAATGAAAAAGAAAGCACAGAGGGTACAGAAGTT
CAAGAAAATGTGGATGAAGCACTAGTAAAGGCTGATAAAGATGATGGACCTGGTGAGCAC
GACAAACCGGATGCAGTCATAGCTGATGAGAAGAAACCTGAGGTGGAAGGAGTGGAAAAA
GAGAAAGAAAATAGAAGTGCACTTGAATCTGAAGGAGAGATTAAGGAGAAAGAATCAGCA
AATGGCAACAATGTGGAACAACATAGTTTGAAGGATAGTGAGATAAGCAAGAAAGTGGAA
GAAGGAATCGAGAATGGCAGCCAGGCCAAGCCTTGA

Peptide Sequence

PEP ID

VIT_11s0016g05580.t01
PEP Infomation

pep chromosome:12X:11:4977221:4984421:-1 gene:VIT_11s0016g05580 transcript:VIT_11s0016g05580.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MASSVEKDEVVSLELPAPPGWKKKFMPKRGLTPKKNEIIFTSPTGEEINSKRQLEQYLKS
HPGGPAIQEFDWGTGETPRRSARISEKAKATPPRELEPAKKRSRKSSASKKDNKETETIP
DETETKEVHMQEAKKTEDNAEAEIQKDVVNENLIETKDKAEDVNTKTEEAPPEGTQVEQD
VKIPDDAEEGKKNAEKEPGEKGGDSEVAQNEKESTEGTEVQENVDEALVKADKDDGPGEH
DKPDAVIADEKKPEVEGVEKEKENRSALESEGEIKEKESANGNNVEQHSLKDSEISKKVE
EGIENGSQAKP

Transcript Sequence

Transcript ID

VIT_11s0016g05580.t01
Transcript Infomation

cdna chromosome:12X:11:4977221:4984421:-1 gene:VIT_11s0016g05580 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATTTCTTGTGCCTCTTCTTCTTCTTCCTCGAAACAATATTACAGCAGAGAAACCCGCAGA
GAGAGAAAGGAATAGAAAATGGCAAGCTCAGTGGAGAAAGATGAAGTGGTTTCTTTGGAA
CTGCCGGCTCCTCCTGGATGGAAGAAAAAGTTCATGCCTAAGAGAGGTTTAACCCCCAAG
AAAAATGAGATTATATTCACTTCCCCAACTGGAGAGGAAATCAATAGTAAAAGGCAGTTG
GAACAATACCTGAAATCACACCCTGGTGGCCCAGCAATACAAGAGTTTGATTGGGGCACT
GGTGAGACCCCAAGGAGATCAGCAAGGATTAGTGAGAAAGCAAAGGCAACTCCACCAAGA
GAACTTGAGCCTGCCAAGAAGCGAAGCAGAAAATCATCAGCTTCAAAGAAGGATAACAAG
GAAACAGAAACCATTCCTGATGAAACTGAGACAAAAGAAGTTCACATGCAAGAAGCTAAA
AAAACTGAGGATAATGCGGAGGCAGAAATTCAGAAAGATGTTGTGAATGAAAATCTCATT
GAGACTAAAGATAAAGCAGAAGATGTCAATACTAAAACAGAAGAAGCTCCTCCTGAAGGA
ACTCAAGTTGAGCAAGATGTTAAAATACCTGATGATGCTGAAGAAGGCAAAAAGAATGCA
GAAAAAGAGCCTGGTGAGAAGGGTGGTGATTCTGAAGTAGCTCAAAATGAAAAAGAAAGC
ACAGAGGGTACAGAAGTTCAAGAAAATGTGGATGAAGCACTAGTAAAGGCTGATAAAGAT
GATGGACCTGGTGAGCACGACAAACCGGATGCAGTCATAGCTGATGAGAAGAAACCTGAG
GTGGAAGGAGTGGAAAAAGAGAAAGAAAATAGAAGTGCACTTGAATCTGAAGGAGAGATT
AAGGAGAAAGAATCAGCAAATGGCAACAATGTGGAACAACATAGTTTGAAGGATAGTGAG
ATAAGCAAGAAAGTGGAAGAAGGAATCGAGAATGGCAGCCAGGCCAAGCCTTGAGTTATT
TATATATTAATTTTACATTGGCTCTCTTTCACCTCTTTATGACCATTTTAGATTTATGGG
TACCCCTGGATGACTGTAGTTTATATGTTTTTAGTGATAGAAATTTAATTGTTGGTGAAG
ACATCTGTCTGTATAATCTATAGATTAGGTCTTTAATCTAGTAGCTTTTCTTGCATTGGA
GCAACTTGTAGCTTTCAGAGATCTTTGTAACATTATAG