Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05560.t01
CDS Infomation

cds chromosome:12X:11:4949818:4954844:-1 gene:VIT_11s0016g05560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGAAGTCCTGGCGTTTCTTTTATCGGTTTCTTCGGGTTTTCTTTATAGTCTTCGCCATG
AATGGATCCTTGACAGTGCAAGCATTCACTGGAACCTATGGAATAAATTATGGGAGAATT
GCAGATAACATCCCTTCACCTGATGAAGTTGTCACACTTCTCAGAGCATTAAAGATAAAG
AATGTTCGAATTTACGATGCTGATCACAGTGTCCTCGAGGCTTTTAGTGGAACTGGCCTT
GAAATAGTGGTTGGAGTTCCGAATGGAAACCTGAAAGATATGAATGCTTCTGAGGACCAT
GCCCTGAGTTGGGTTAAAGAAAATGTACAGTCATTCCTTCCTGATACACATATTCGGGGA
ATTGCTGTGGGAAATGAAGTTCTAGGGGGTGATCAAGAACTATGGGGAGTTCTTTTGGGT
GCAGTAAAAAATGTTCATAAAGCCCTAGAAAAGTTTCACTTAACTGATCTAATTCAGGTT
TCAACTGCACATTCACAGGCTGTTTTGTCAAATTCATATCCTCCCTCCTCATGTATTTTC
AATCAGAATATTGTCCAATACATGAAGCCACTCCTGGAGTTCTTCTCAGAGATTCATTCT
CCTTTCTGTTTGAATGCTTACCCCTTTCTTGACTATATGGGAGATCCAGCGAACATTGAT
ATAAATTATGCCCTTTTCCAGTCAACGCAGGGTATTTATGATACAAAGGCTAAACTTCAT
TATGATAACATGCTTGATGCTCAGATTGATGCTGCCTATGCTGCTTTGGAAAATTCTGGA
TTTAAAAAGATGGAAGTTATAATTACAGAAACGGGCTGGGCTTCTCGTGGGGATGAAAAT
GAAGCTGCTGCCACCTCAACAAATGCAAGGACTTACAATTATAACCTGCGTAAAAGACTT
GCCAAGAAGAAGGGAACCCCACTCAGGCCAAAAAATGTGGTGAAGGCATATATTTTTGCA
GTTTTCAATGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGGAACTTTGGACTGTTTAAA
GCTGATGGGAGCATTTCATATGACATTGGGTTTAAAGGACTGAAATCTTCTGCAACTTCA
TCTATTTTGTCCTTGAAGAAAATTCGAGCTCAAGATTGGTCTGCTTCTTACTCCTTGGTA
TTCACAGCCTGTGCTGCAGTGTTGCTTCTGTTTTTAAGATTGTGA

Peptide Sequence

PEP ID

VIT_11s0016g05560.t01
PEP Infomation

pep chromosome:12X:11:4949818:4954844:-1 gene:VIT_11s0016g05560 transcript:VIT_11s0016g05560.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MKSWRFFYRFLRVFFIVFAMNGSLTVQAFTGTYGINYGRIADNIPSPDEVVTLLRALKIK
NVRIYDADHSVLEAFSGTGLEIVVGVPNGNLKDMNASEDHALSWVKENVQSFLPDTHIRG
IAVGNEVLGGDQELWGVLLGAVKNVHKALEKFHLTDLIQVSTAHSQAVLSNSYPPSSCIF
NQNIVQYMKPLLEFFSEIHSPFCLNAYPFLDYMGDPANIDINYALFQSTQGIYDTKAKLH
YDNMLDAQIDAAYAALENSGFKKMEVIITETGWASRGDENEAAATSTNARTYNYNLRKRL
AKKKGTPLRPKNVVKAYIFAVFNENLKPGPTSERNFGLFKADGSISYDIGFKGLKSSATS
SILSLKKIRAQDWSASYSLVFTACAAVLLLFLRL

Transcript Sequence

Transcript ID

VIT_11s0016g05560.t01
Transcript Infomation

cdna chromosome:12X:11:4949818:4954844:-1 gene:VIT_11s0016g05560 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GTCACCCTCTGCCCGGCCGACCACACCGGAGGAGCTTCTGGAGAGAGACAGCTGCAGAGA
GAAATCCATTGATTTCTGTGTATCCACCAGTTCCTTAGAGAGGGAGGAACAGAGAACAAA
GGAGGGGAGAAGAAAAGGCGGTCTACTTTAGGGAGAGAGAGTGAAGAGTATCTTTGTATC
TATCTCTTTGGCATATGGAATGGTTGAAGAAGAAGAATCTATCATTGGCTTTTCTCAGTT
TAAGTGCACCGCACTAGTTCAAATCTCTGTCGTTGCTATAGATTGAATCCTTCTCCTTAA
TTCTTTGACCAGGGAAATGAAGTCCTGGCGTTTCTTTTATCGGTTTCTTCGGGTTTTCTT
TATAGTCTTCGCCATGAATGGATCCTTGACAGTGCAAGCATTCACTGGAACCTATGGAAT
AAATTATGGGAGAATTGCAGATAACATCCCTTCACCTGATGAAGTTGTCACACTTCTCAG
AGCATTAAAGATAAAGAATGTTCGAATTTACGATGCTGATCACAGTGTCCTCGAGGCTTT
TAGTGGAACTGGCCTTGAAATAGTGGTTGGAGTTCCGAATGGAAACCTGAAAGATATGAA
TGCTTCTGAGGACCATGCCCTGAGTTGGGTTAAAGAAAATGTACAGTCATTCCTTCCTGA
TACACATATTCGGGGAATTGCTGTGGGAAATGAAGTTCTAGGGGGTGATCAAGAACTATG
GGGAGTTCTTTTGGGTGCAGTAAAAAATGTTCATAAAGCCCTAGAAAAGTTTCACTTAAC
TGATCTAATTCAGGTTTCAACTGCACATTCACAGGCTGTTTTGTCAAATTCATATCCTCC
CTCCTCATGTATTTTCAATCAGAATATTGTCCAATACATGAAGCCACTCCTGGAGTTCTT
CTCAGAGATTCATTCTCCTTTCTGTTTGAATGCTTACCCCTTTCTTGACTATATGGGAGA
TCCAGCGAACATTGATATAAATTATGCCCTTTTCCAGTCAACGCAGGGTATTTATGATAC
AAAGGCTAAACTTCATTATGATAACATGCTTGATGCTCAGATTGATGCTGCCTATGCTGC
TTTGGAAAATTCTGGATTTAAAAAGATGGAAGTTATAATTACAGAAACGGGCTGGGCTTC
TCGTGGGGATGAAAATGAAGCTGCTGCCACCTCAACAAATGCAAGGACTTACAATTATAA
CCTGCGTAAAAGACTTGCCAAGAAGAAGGGAACCCCACTCAGGCCAAAAAATGTGGTGAA
GGCATATATTTTTGCAGTTTTCAATGAGAATTTGAAGCCTGGTCCAACTTCTGAGAGGAA
CTTTGGACTGTTTAAAGCTGATGGGAGCATTTCATATGACATTGGGTTTAAAGGACTGAA
ATCTTCTGCAACTTCATCTATTTTGTCCTTGAAGAAAATTCGAGCTCAAGATTGGTCTGC
TTCTTACTCCTTGGTATTCACAGCCTGTGCTGCAGTGTTGCTTCTGTTTTTAAGATTGTG
ACAAAGCAAAGGCTTTGGGGCACCCTCTCTGTCATATTCAATGATATTGTTCCTTCCCTC
TTAAAGAAGTTGGTCCAGTTTAGATCACACCTGTGCCTGCTTTCAATTCCAAACCAGCAT
ACAGAGGCACTCATAGTTCCTAGATTTGGTACTATTTCAAGTCACTTGGCAATGTAACAC
CCCCAATATATCATTGATTTTTGTTGGCTTT