Plant GARDEN
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TOP > About the Species(Vitis vinifera ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Vitis vinifera

CDS Sequence

CDS ID

VIT_11s0016g05490.t01
CDS Infomation

cds chromosome:12X:11:4862600:4867055:-1 gene:VIT_11s0016g05490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

ATGACGACGTCGAACGTGGTGGTGCTAGACAACGGCGGAGGCCTAATCAAGGCCGGAATA
GGCGGCGAACGGGATCCTAGTGCCGTGATCCCCAACTGCATGGGGAAGCCTCCCTCCTCG
AAGAAGTGGCTGATGGGCGACCAACTCCACTCCCACTCGGACCTCACCTCAGTCTCCCTC
CGCCGCCCATTCGACCGCGGATACCTCCTCAACCCCGACCTCCAACGTGACATCTGGTCC
CACCTCTTCTCCAACCTTCTCCGCATCTCCCCTTCCCAGTCATCTCTCCTCCTCGTCGAA
CCCCTCTTCAATCTCCCTTCTATTCAACGCTCCATAGACGAGCTCGTTTTCGAAGACCTA
GGCTTCCGCTCCCTTTTTGTCGCCGATTCACCTTCCCTCGTCCACCTCTACGAGGCTAGC
CACTGCCCCTATGGTCTCCTCGCTAAGTCCCAGTGTAGTCTTGTTGTGGATTGCGGCTTC
TCCTTCACCCATGCCGCCCCCGTCTTCCAGAATTTCACCATTAACTACGCCGTGAAGCGC
CTCGATTTGGGAGGCAAGGCATTGACTAATTATCTCAAGGAACTGGTGTCTTATCGTGCC
GTTAATGTTATGGATGAGACTTTCATTATGGACGATGTCAAGGAGAAGCTCTGCTTCGTC
TCTCTAGATGTCCCTCGCGATCTCCAGATTGCCAGGAGACCTGGAAAGGATAATCTCTTT
AGATGTACATATGTTCTTCCTGATGGTATCACATATATGAAGGGTTTTGTAAAAGACCCA
AATGAAGCAGGGAGATACCGCACTTTGGACGGTGGAGCCCCTCCATCAACAGTAACAAAG
GAGGATATGGATCAGCATGAAGTTACAGAAAAGCCTGAGGACAGAAGGAGAATTGATTTA
ACAAAAACTGAGTTTAACTTGACAAATGAGCGCTTCCTAGTCCCAGAGATGATCTTCCGT
CCTGCTGATTTGGGCATGAACCAGGCTGGATTAGCAGAGTGCATTATCCGAGCTGTCAAC
TCCTGTCATCCTGATCTTCACCCTGTACTCTATCAAAGCATCATTTTGACTGGTGGAAGC
ACATTATTTCCTCAGTTTGCACAAAGACTAGAAATGGAGCTTCGACCTCTTGTACCTGAT
GATTACCAAGTCAAGATAACAACTCAAGAAGATCCCATATTAGGTGTGTGGCGTGGGGGA
TCACTTTTGGCATCTAGCCCTGATTTTGAAGCTATGTGTGTCACCAAGTCTGAGTATGAG
GAGCTTGGATCTGCTCGGTGTCGCAAGCGATTCTTTCATTGA

Peptide Sequence

PEP ID

VIT_11s0016g05490.t01
PEP Infomation

pep chromosome:12X:11:4862600:4867055:-1 gene:VIT_11s0016g05490 transcript:VIT_11s0016g05490.t01 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

MTTSNVVVLDNGGGLIKAGIGGERDPSAVIPNCMGKPPSSKKWLMGDQLHSHSDLTSVSL
RRPFDRGYLLNPDLQRDIWSHLFSNLLRISPSQSSLLLVEPLFNLPSIQRSIDELVFEDL
GFRSLFVADSPSLVHLYEASHCPYGLLAKSQCSLVVDCGFSFTHAAPVFQNFTINYAVKR
LDLGGKALTNYLKELVSYRAVNVMDETFIMDDVKEKLCFVSLDVPRDLQIARRPGKDNLF
RCTYVLPDGITYMKGFVKDPNEAGRYRTLDGGAPPSTVTKEDMDQHEVTEKPEDRRRIDL
TKTEFNLTNERFLVPEMIFRPADLGMNQAGLAECIIRAVNSCHPDLHPVLYQSIILTGGS
TLFPQFAQRLEMELRPLVPDDYQVKITTQEDPILGVWRGGSLLASSPDFEAMCVTKSEYE
ELGSARCRKRFFH

Transcript Sequence

Transcript ID

VIT_11s0016g05490.t01
Transcript Infomation

cdna chromosome:12X:11:4862600:4867055:-1 gene:VIT_11s0016g05490 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence

GGAGATTCATGTGGAGGCGATGACGACGTCGAACGTGGTGGTGCTAGACAACGGCGGAGG
CCTAATCAAGGCCGGAATAGGCGGCGAACGGGATCCTAGTGCCGTGATCCCCAACTGCAT
GGGGAAGCCTCCCTCCTCGAAGAAGTGGCTGATGGGCGACCAACTCCACTCCCACTCGGA
CCTCACCTCAGTCTCCCTCCGCCGCCCATTCGACCGCGGATACCTCCTCAACCCCGACCT
CCAACGTGACATCTGGTCCCACCTCTTCTCCAACCTTCTCCGCATCTCCCCTTCCCAGTC
ATCTCTCCTCCTCGTCGAACCCCTCTTCAATCTCCCTTCTATTCAACGCTCCATAGACGA
GCTCGTTTTCGAAGACCTAGGCTTCCGCTCCCTTTTTGTCGCCGATTCACCTTCCCTCGT
CCACCTCTACGAGGCTAGCCACTGCCCCTATGGTCTCCTCGCTAAGTCCCAGTGTAGTCT
TGTTGTGGATTGCGGCTTCTCCTTCACCCATGCCGCCCCCGTCTTCCAGAATTTCACCAT
TAACTACGCCGTGAAGCGCCTCGATTTGGGAGGCAAGGCATTGACTAATTATCTCAAGGA
ACTGGTGTCTTATCGTGCCGTTAATGTTATGGATGAGACTTTCATTATGGACGATGTCAA
GGAGAAGCTCTGCTTCGTCTCTCTAGATGTCCCTCGCGATCTCCAGATTGCCAGGAGACC
TGGAAAGGATAATCTCTTTAGATGTACATATGTTCTTCCTGATGGTATCACATATATGAA
GGGTTTTGTAAAAGACCCAAATGAAGCAGGGAGATACCGCACTTTGGACGGTGGAGCCCC
TCCATCAACAGTAACAAAGGAGGATATGGATCAGCATGAAGTTACAGAAAAGCCTGAGGA
CAGAAGGAGAATTGATTTAACAAAAACTGAGTTTAACTTGACAAATGAGCGCTTCCTAGT
CCCAGAGATGATCTTCCGTCCTGCTGATTTGGGCATGAACCAGGCTGGATTAGCAGAGTG
CATTATCCGAGCTGTCAACTCCTGTCATCCTGATCTTCACCCTGTACTCTATCAAAGCAT
CATTTTGACTGGTGGAAGCACATTATTTCCTCAGTTTGCACAAAGACTAGAAATGGAGCT
TCGACCTCTTGTACCTGATGATTACCAAGTCAAGATAACAACTCAAGAAGATCCCATATT
AGGTGTGTGGCGTGGGGGATCACTTTTGGCATCTAGCCCTGATTTTGAAGCTATGTGTGT
CACCAAGTCTGAGTATGAGGAGCTTGGATCTGCTCGGTGTCGCAAGCGATTCTTTCATTG
AGTGATGAAATGAAGAAGGTTTTGTAAGCATGATTTACATGAGAAGTGGAAAACTGGTTT
GAAGTTGAAGCGTTAATCTTCATGATGTGGTGACATGCTACTGTCTGGGTTCTCGGCTGT
TT